RNA–Protein interactions for RNA: ENST00000559397.5

TPM1-219, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-219ENST00000559397 MED19A0JLT2 244 aaPredicted RBP15.45■□□□□ 0.06
TPM1-219ENST00000559397 CLDN4O14493 209 aa15.45■□□□□ 0.06
TPM1-219ENST00000559397 TLX3O43711 291 aaPredicted RBP15.45■□□□□ 0.06
TPM1-219ENST00000559397 FGF17O60258 216 aa15.45■□□□□ 0.06
TPM1-219ENST00000559397 LDB3O75112 727 aa15.45■□□□□ 0.06
TPM1-219ENST00000559397 UMODP07911 640 aa15.45■□□□□ 0.06
TPM1-219ENST00000559397 RAP2AP10114 183 aa15.45■□□□□ 0.06
TPM1-219ENST00000559397 HOXB6P17509 224 aaKnown RBP15.45■□□□□ 0.06
TPM1-219ENST00000559397 CSNK2A2P19784 350 aaPredicted RBP15.45■□□□□ 0.06
TPM1-219ENST00000559397 KDELR2P33947 212 aa15.45■□□□□ 0.06
TPM1-219ENST00000559397 EEF1A2Q05639 463 aaKnown RBP15.45■□□□□ 0.06
TPM1-219ENST00000559397 HSPB3Q12988 150 aa15.45■□□□□ 0.06
TPM1-219ENST00000559397 CLN3Q13286 438 aa15.45■□□□□ 0.06
TPM1-219ENST00000559397 LRRC36Q1X8D7 754 aa15.45■□□□□ 0.06
TPM1-219ENST00000559397 FAM98BQ52LJ0 330 aaKnown RBP15.45■□□□□ 0.06
TPM1-219ENST00000559397 SFT2D3Q587I9 215 aa15.45■□□□□ 0.06
TPM1-219ENST00000559397 GCNT6Q5T4J0 391 aa15.45■□□□□ 0.06
TPM1-219ENST00000559397 FAM69BQ5VUD6 431 aa15.45■□□□□ 0.06
TPM1-219ENST00000559397 ENPP6Q6UWR7 440 aa15.45■□□□□ 0.06
TPM1-219ENST00000559397 TMEM64Q6YI46 380 aa15.45■□□□□ 0.06
TPM1-219ENST00000559397 AMIGO2Q86SJ2 522 aa15.45■□□□□ 0.06
TPM1-219ENST00000559397 RNF130Q86XS8 419 aa15.45■□□□□ 0.06
TPM1-219ENST00000559397 IL22RA1Q8N6P7 574 aa15.45■□□□□ 0.06
TPM1-219ENST00000559397 C11orf65Q8NCR3 313 aa15.45■□□□□ 0.06
TPM1-219ENST00000559397 OR2Y1Q8NGV0 311 aa15.45■□□□□ 0.06
TPM1-219ENST00000559397 SEPHS2Q99611 448 aa15.45■□□□□ 0.06
TPM1-219ENST00000559397 CHID1Q9BWS9 393 aa15.45■□□□□ 0.06
TPM1-219ENST00000559397 MAGIXQ9H6Y5 334 aa15.45■□□□□ 0.06
TPM1-219ENST00000559397 NECTIN3Q9NQS3 549 aa15.45■□□□□ 0.06
TPM1-219ENST00000559397 PSME2Q9UL46 239 aa15.45■□□□□ 0.06
TPM1-219ENST00000559397 TCFL5Q9UL49 500 aa15.45■□□□□ 0.06
TPM1-219ENST00000559397 MKL2Q9ULH7 1088 aa15.45■□□□□ 0.06
TPM1-219ENST00000559397 PTRH2Q9Y3E5 179 aaKnown RBP15.45■□□□□ 0.06
TPM1-219ENST00000559397 PCDHGA6Q9Y5G7 932 aa15.45■□□□□ 0.06
TPM1-219ENST00000559397 SNX8Q9Y5X2 465 aa15.45■□□□□ 0.06
TPM1-219ENST00000559397 IGKV3D-11A0A0A0MRZ8 115 aa15.44■□□□□ 0.06
TPM1-219ENST00000559397 IDSB3KWA1 339 aa15.44■□□□□ 0.06
TPM1-219ENST00000559397 PRKD3O94806 890 aa15.44■□□□□ 0.06
TPM1-219ENST00000559397 GPR75O95800 540 aa15.44■□□□□ 0.06
TPM1-219ENST00000559397 SERPINA1P01009 418 aa15.44■□□□□ 0.06
TPM1-219ENST00000559397 MAOAP21397 527 aa15.44■□□□□ 0.06
TPM1-219ENST00000559397 CRATP43155 626 aa15.44■□□□□ 0.06
TPM1-219ENST00000559397 NCBP2P52298 156 aaKnown RBP eCLIP15.44■□□□□ 0.06
TPM1-219ENST00000559397 RPS18P62269 152 aaKnown RBP15.44■□□□□ 0.06
TPM1-219ENST00000559397 RPS15P62841 145 aaKnown RBP15.44■□□□□ 0.06
TPM1-219ENST00000559397 IGLV3-21P80748 117 aaPredicted RBP15.44■□□□□ 0.06
TPM1-219ENST00000559397 FOLH1Q04609 750 aa15.44■□□□□ 0.06
TPM1-219ENST00000559397 CHRNB3Q05901 458 aa15.44■□□□□ 0.06
TPM1-219ENST00000559397 DUSP2Q05923 314 aa15.44■□□□□ 0.06
TPM1-219ENST00000559397 SLC13A2Q13183 592 aa15.44■□□□□ 0.06
TPM1-219ENST00000559397 TAF11Q15544 211 aa15.44■□□□□ 0.06
TPM1-219ENST00000559397 ATP6AP1Q15904 470 aa15.44■□□□□ 0.06
TPM1-219ENST00000559397 MFSD4BQ5TF39 518 aa15.44■□□□□ 0.06
TPM1-219ENST00000559397 OR4N5Q8IXE1 308 aa15.44■□□□□ 0.06
TPM1-219ENST00000559397 FBXO30Q8TB52 745 aa15.44■□□□□ 0.06
TPM1-219ENST00000559397 TSLPQ969D9 159 aa15.44■□□□□ 0.06
TPM1-219ENST00000559397 PPWD1Q96BP3 646 aaKnown RBP15.44■□□□□ 0.06
TPM1-219ENST00000559397 CENPNQ96H22 339 aaPredicted RBP15.44■□□□□ 0.06
TPM1-219ENST00000559397 RNF145Q96MT1 663 aa15.44■□□□□ 0.06
TPM1-219ENST00000559397 C3orf18Q9UK00 162 aa15.44■□□□□ 0.06
TPM1-219ENST00000559397 CNOT11Q9UKZ1 510 aaKnown RBP15.44■□□□□ 0.06
TPM1-219ENST00000559397 FAF1Q9UNN5 650 aaPredicted RBP15.44■□□□□ 0.06
TPM1-219ENST00000559397 ENTPD4Q9Y227 616 aa15.44■□□□□ 0.06
TPM1-219ENST00000559397 PADI2Q9Y2J8 665 aa15.44■□□□□ 0.06
TPM1-219ENST00000559397 DTNAQ9Y4J8 743 aa15.44■□□□□ 0.06
TPM1-219ENST00000559397 FRYQ5TBA9 3013 aa15.44■□□□□ 0.06
TPM1-219ENST00000559397 A0A1W2PS29 197 aa15.44■□□□□ 0.06
TPM1-219ENST00000559397 ERAL1O75616 437 aaKnown RBP15.44■□□□□ 0.06
TPM1-219ENST00000559397 HEXBP07686 556 aa15.44■□□□□ 0.06
TPM1-219ENST00000559397 CYC1P08574 325 aa15.44■□□□□ 0.06
TPM1-219ENST00000559397 ARAFP10398 606 aa15.44■□□□□ 0.06
TPM1-219ENST00000559397 ACADSP16219 412 aa15.44■□□□□ 0.06
TPM1-219ENST00000559397 ATP6V1C1P21283 382 aa15.44■□□□□ 0.06
TPM1-219ENST00000559397 PPP2R1BP30154 601 aa15.44■□□□□ 0.06
TPM1-219ENST00000559397 MAGEA8P43361 318 aa15.44■□□□□ 0.06
TPM1-219ENST00000559397 CCT3P49368 545 aaKnown RBP15.44■□□□□ 0.06
TPM1-219ENST00000559397 EMP2P54851 167 aa15.44■□□□□ 0.06
TPM1-219ENST00000559397 ID2Q02363 134 aa15.44■□□□□ 0.06
TPM1-219ENST00000559397 ZNF750Q32MQ0 723 aa15.44■□□□□ 0.06
TPM1-219ENST00000559397 GRAMD1BQ3KR37 738 aa15.44■□□□□ 0.06
TPM1-219ENST00000559397 C6orf120Q7Z4R8 191 aa15.44■□□□□ 0.06
TPM1-219ENST00000559397 SAMD14Q8IZD0 417 aaPredicted RBP15.44■□□□□ 0.06
TPM1-219ENST00000559397 OR4K14Q8NGD5 310 aa15.44■□□□□ 0.06
TPM1-219ENST00000559397 SNIP1Q8TAD8 396 aaKnown RBP15.44■□□□□ 0.06
TPM1-219ENST00000559397 SFXN5Q8TD22 340 aa15.44■□□□□ 0.06
TPM1-219ENST00000559397 MAL2Q969L2 176 aa15.44■□□□□ 0.06
TPM1-219ENST00000559397 PYURFQ96I23 114 aa15.44■□□□□ 0.06
TPM1-219ENST00000559397 PTCHD1Q96NR3 888 aa15.44■□□□□ 0.06
TPM1-219ENST00000559397 CRB3Q9BUF7 120 aa15.44■□□□□ 0.06
TPM1-219ENST00000559397 SEMA6AQ9H2E6 1030 aa15.44■□□□□ 0.06
TPM1-219ENST00000559397 GIMAP4Q9NUV9 329 aa15.44■□□□□ 0.06
TPM1-219ENST00000559397 SAMD4AQ9UPU9 718 aaKnown RBP15.44■□□□□ 0.06
TPM1-219ENST00000559397 V9GYQ6 96 aa15.44■□□□□ 0.06
TPM1-219ENST00000559397 LAMA5O15230 3695 aa15.44■□□□□ 0.06
TPM1-219ENST00000559397 TPST1O60507 370 aa15.43■□□□□ 0.06
TPM1-219ENST00000559397 ALOX12BO75342 701 aa15.43■□□□□ 0.06
TPM1-219ENST00000559397 GCM2O75603 506 aaPredicted RBP15.43■□□□□ 0.06
TPM1-219ENST00000559397 LIFP15018 202 aa15.43■□□□□ 0.06
TPM1-219ENST00000559397 ZNF26P17031 533 aaPredicted RBP15.43■□□□□ 0.06
TPM1-219ENST00000559397 MPIP34949 423 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms