RNA–Protein interactions for RNA: ENST00000559108.1

TPM1-217, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-217ENST00000559108 PAGE3Q5JUK9 113 aa10.07□□□□□ -0.8
TPM1-217ENST00000559108 AGAP7PQ5VUJ5 663 aa10.07□□□□□ -0.8
TPM1-217ENST00000559108 BLOC1S3Q6QNY0 202 aa10.07□□□□□ -0.8
TPM1-217ENST00000559108 IGFL3Q6UXB1 125 aa10.07□□□□□ -0.8
TPM1-217ENST00000559108 ASB18Q6ZVZ8 466 aa10.07□□□□□ -0.8
TPM1-217ENST00000559108 SPATA21Q7Z572 469 aa10.07□□□□□ -0.8
TPM1-217ENST00000559108 PIGWQ7Z7B1 504 aa10.07□□□□□ -0.8
TPM1-217ENST00000559108 RETREG3Q86VR2 466 aa10.07□□□□□ -0.8
TPM1-217ENST00000559108 MSRB3Q8IXL7 192 aa10.07□□□□□ -0.8
TPM1-217ENST00000559108 C10orf111Q8N326 155 aa10.07□□□□□ -0.8
TPM1-217ENST00000559108 CPSF7Q8N684 471 aaKnown RBP10.07□□□□□ -0.8
TPM1-217ENST00000559108 MDS2Q8NDY4 140 aa10.07□□□□□ -0.8
TPM1-217ENST00000559108 OR7G1Q8NGA0 311 aa10.07□□□□□ -0.8
TPM1-217ENST00000559108 OR8K3Q8NH51 312 aa10.07□□□□□ -0.8
TPM1-217ENST00000559108 NUBPLQ8TB37 319 aa10.07□□□□□ -0.8
TPM1-217ENST00000559108 OR5P2Q8WZ92 322 aa10.07□□□□□ -0.8
TPM1-217ENST00000559108 ZBED6CLQ96FA7 236 aaPredicted RBP10.07□□□□□ -0.8
TPM1-217ENST00000559108 VPS50Q96JG6 964 aa10.07□□□□□ -0.8
TPM1-217ENST00000559108 RILPQ96NA2 401 aa10.07□□□□□ -0.8
TPM1-217ENST00000559108 CCDC115Q96NT0 180 aa10.07□□□□□ -0.8
TPM1-217ENST00000559108 AGAP4Q96P64 663 aa10.07□□□□□ -0.8
TPM1-217ENST00000559108 UBL7Q96S82 380 aaPredicted RBP10.07□□□□□ -0.8
TPM1-217ENST00000559108 ARHGAP9Q9BRR9 750 aa10.07□□□□□ -0.8
TPM1-217ENST00000559108 MFRPQ9BY79 579 aa10.07□□□□□ -0.8
TPM1-217ENST00000559108 ADNPQ9H2P0 1102 aa10.07□□□□□ -0.8
TPM1-217ENST00000559108 EPS8L2Q9H6S3 715 aa10.07□□□□□ -0.8
TPM1-217ENST00000559108 GPATCH2Q9NW75 528 aa10.07□□□□□ -0.8
TPM1-217ENST00000559108 CCDC167Q9P0B6 97 aa10.07□□□□□ -0.8
TPM1-217ENST00000559108 ARMCX1Q9P291 453 aa10.07□□□□□ -0.8
TPM1-217ENST00000559108 COPS7AQ9UBW8 275 aa10.07□□□□□ -0.8
TPM1-217ENST00000559108 BCAP29Q9UHQ4 241 aa10.07□□□□□ -0.8
TPM1-217ENST00000559108 TUBD1Q9UJT1 453 aa10.07□□□□□ -0.8
TPM1-217ENST00000559108 KCNE3Q9Y6H6 103 aa10.07□□□□□ -0.8
TPM1-217ENST00000559108 C2orf92A0A1B0GVN3 265 aa10.06□□□□□ -0.8
TPM1-217ENST00000559108 GXYLT2A0PJZ3 443 aa10.06□□□□□ -0.8
TPM1-217ENST00000559108 FAM234BA2RU67 622 aa10.06□□□□□ -0.8
TPM1-217ENST00000559108 SYNDIG1LA6NDD5 238 aa10.06□□□□□ -0.8
TPM1-217ENST00000559108 C17orf51A8MQB3 221 aa10.06□□□□□ -0.8
TPM1-217ENST00000559108 NR5A2O00482 541 aa10.06□□□□□ -0.8
TPM1-217ENST00000559108 FBP2O00757 339 aa10.06□□□□□ -0.8
TPM1-217ENST00000559108 PRAMEF2O60811 474 aa10.06□□□□□ -0.8
TPM1-217ENST00000559108 WISP2O76076 250 aa10.06□□□□□ -0.8
TPM1-217ENST00000559108 CPSF4O95639 269 aaKnown RBP10.06□□□□□ -0.8
TPM1-217ENST00000559108 IGKV1D-16P01601 117 aa10.06□□□□□ -0.8
TPM1-217ENST00000559108 S100A3P33764 101 aa10.06□□□□□ -0.8
TPM1-217ENST00000559108 TRHRP34981 398 aaPredicted RBP10.06□□□□□ -0.8
TPM1-217ENST00000559108 RPL3P39023 403 aaKnown RBP10.06□□□□□ -0.8
TPM1-217ENST00000559108 MAN2A2P49641 1150 aa10.06□□□□□ -0.8
TPM1-217ENST00000559108 NR0B1P51843 470 aaKnown RBP10.06□□□□□ -0.8
TPM1-217ENST00000559108 CLNS1AP54105 237 aaKnown RBP10.06□□□□□ -0.8
TPM1-217ENST00000559108 MEP1AQ16819 746 aa10.06□□□□□ -0.8
TPM1-217ENST00000559108 VPS26BQ4G0F5 336 aa10.06□□□□□ -0.8
TPM1-217ENST00000559108 AGKQ53H12 422 aa10.06□□□□□ -0.8
TPM1-217ENST00000559108 LACTB2Q53H82 288 aaPredicted RBP10.06□□□□□ -0.8
TPM1-217ENST00000559108 PRR30Q53SZ7 412 aaPredicted RBP10.06□□□□□ -0.8
TPM1-217ENST00000559108 PIGGQ5H8A4 983 aa10.06□□□□□ -0.8
TPM1-217ENST00000559108 ABHD17BQ5VST6 288 aa10.06□□□□□ -0.8
TPM1-217ENST00000559108 SLC6A19Q695T7 634 aa10.06□□□□□ -0.8
TPM1-217ENST00000559108 SPINK14Q6IE38 97 aa10.06□□□□□ -0.8
TPM1-217ENST00000559108 MFSD12Q6NUT3 480 aa10.06□□□□□ -0.8
TPM1-217ENST00000559108 OLIG3Q7RTU3 272 aa10.06□□□□□ -0.8
TPM1-217ENST00000559108 MDGA2Q7Z553 956 aa10.06□□□□□ -0.8
TPM1-217ENST00000559108 ZAR1Q86SH2 424 aa10.06□□□□□ -0.8
TPM1-217ENST00000559108 PTRH1Q86Y79 214 aaKnown RBP10.06□□□□□ -0.8
TPM1-217ENST00000559108 TREML1Q86YW5 311 aa10.06□□□□□ -0.8
TPM1-217ENST00000559108 SAMD14Q8IZD0 417 aaPredicted RBP10.06□□□□□ -0.8
TPM1-217ENST00000559108 LGI4Q8N135 537 aa10.06□□□□□ -0.8
TPM1-217ENST00000559108 SLC5A8Q8N695 610 aa10.06□□□□□ -0.8
TPM1-217ENST00000559108 GOT1L1Q8NHS2 421 aaPredicted RBP10.06□□□□□ -0.8
TPM1-217ENST00000559108 SLC39A7Q92504 469 aa10.06□□□□□ -0.8
TPM1-217ENST00000559108 AURKBQ96GD4 344 aaPredicted RBP10.06□□□□□ -0.8
TPM1-217ENST00000559108 ART5Q96L15 291 aa10.06□□□□□ -0.8
TPM1-217ENST00000559108 BTBD9Q96Q07 612 aa10.06□□□□□ -0.8
TPM1-217ENST00000559108 OR52E6Q96RD3 313 aa10.06□□□□□ -0.8
TPM1-217ENST00000559108 YIPF4Q9BSR8 244 aa10.06□□□□□ -0.8
TPM1-217ENST00000559108 PAIP1Q9H074 479 aaKnown RBP10.06□□□□□ -0.8
TPM1-217ENST00000559108 TRIM45Q9H8W5 580 aaPredicted RBP10.06□□□□□ -0.8
TPM1-217ENST00000559108 EQTNQ9NQ60 294 aa10.06□□□□□ -0.8
TPM1-217ENST00000559108 DDX18Q9NVP1 670 aaKnown RBP10.06□□□□□ -0.8
TPM1-217ENST00000559108 FBXO34Q9NWN3 711 aa10.06□□□□□ -0.8
TPM1-217ENST00000559108 FAM120CQ9NX05 1096 aaKnown RBP10.06□□□□□ -0.8
TPM1-217ENST00000559108 TAS2R9Q9NYW1 312 aa10.06□□□□□ -0.8
TPM1-217ENST00000559108 SLC25A37Q9NYZ2 338 aa10.06□□□□□ -0.8
TPM1-217ENST00000559108 STMN3Q9NZ72 180 aa10.06□□□□□ -0.8
TPM1-217ENST00000559108 FLRT3Q9NZU0 649 aa10.06□□□□□ -0.8
TPM1-217ENST00000559108 ADAM21Q9UKJ8 722 aa10.06□□□□□ -0.8
TPM1-217ENST00000559108 GPR55Q9Y2T6 319 aaPredicted RBP10.06□□□□□ -0.8
TPM1-217ENST00000559108 PCNX3Q9H6A9 2034 aa10.06□□□□□ -0.8
TPM1-217ENST00000559108 SHANK1Q9Y566 2161 aa10.05□□□□□ -0.8
TPM1-217ENST00000559108 TRBV5-3A0A0A0MS03 114 aa10.05□□□□□ -0.8
TPM1-217ENST00000559108 PRSS51A0A1B0GVH4 220 aa10.05□□□□□ -0.8
TPM1-217ENST00000559108 PRAMEF27A3QJZ7 478 aa10.05□□□□□ -0.8
TPM1-217ENST00000559108 PINLYPA6NC86 204 aa10.05□□□□□ -0.8
TPM1-217ENST00000559108 OR5H15A6NDH6 313 aa10.05□□□□□ -0.8
TPM1-217ENST00000559108 OR6C76A6NM76 312 aa10.05□□□□□ -0.8
TPM1-217ENST00000559108 B4DXG7 233 aa10.05□□□□□ -0.8
TPM1-217ENST00000559108 FCHO1O14526 889 aa10.05□□□□□ -0.8
TPM1-217ENST00000559108 IFI6P09912 130 aa10.05□□□□□ -0.8
TPM1-217ENST00000559108 GPC1P35052 558 aa10.05□□□□□ -0.8
TPM1-217ENST00000559108 TNFSF10P50591 281 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms