RNA–Protein interactions for RNA: ENST00000559100.1

GABPB1-209, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 290 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-209ENST00000559100 P3H4Q92791 437 aa1.98□□□□□ -2.09
GABPB1-209ENST00000559100 LHX4Q969G2 390 aa1.98□□□□□ -2.09
GABPB1-209ENST00000559100 UPRTQ96BW1 309 aa1.98□□□□□ -2.09
GABPB1-209ENST00000559100 TUBGCP3Q96CW5 907 aa1.98□□□□□ -2.09
GABPB1-209ENST00000559100 FAM218AQ96MZ4 157 aa1.98□□□□□ -2.09
GABPB1-209ENST00000559100 OR4F4Q96R69 305 aa1.98□□□□□ -2.09
GABPB1-209ENST00000559100 USP28Q96RU2 1077 aa1.98□□□□□ -2.09
GABPB1-209ENST00000559100 MRPL13Q9BYD1 178 aaKnown RBP1.98□□□□□ -2.09
GABPB1-209ENST00000559100 LIME1Q9H400 295 aa1.98□□□□□ -2.09
GABPB1-209ENST00000559100 RNF41Q9H4P4 317 aaPredicted RBP1.98□□□□□ -2.09
GABPB1-209ENST00000559100 FNDC4Q9H6D8 234 aaPredicted RBP1.98□□□□□ -2.09
GABPB1-209ENST00000559100 LPAR2Q9HBW0 351 aa1.98□□□□□ -2.09
GABPB1-209ENST00000559100 ZNF71Q9NQZ8 489 aaPredicted RBP1.98□□□□□ -2.09
GABPB1-209ENST00000559100 RBM28Q9NW13 759 aaKnown RBP1.98□□□□□ -2.09
GABPB1-209ENST00000559100 DUS2Q9NX74 493 aaKnown RBP1.98□□□□□ -2.09
GABPB1-209ENST00000559100 SEC14L4Q9UDX3 406 aa1.98□□□□□ -2.09
GABPB1-209ENST00000559100 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP1.98□□□□□ -2.09
GABPB1-209ENST00000559100 MGAT4AQ9UM21 535 aa1.98□□□□□ -2.09
GABPB1-209ENST00000559100 ICAM5Q9UMF0 924 aa1.98□□□□□ -2.09
GABPB1-209ENST00000559100 B9D1Q9UPM9 204 aa1.98□□□□□ -2.09
GABPB1-209ENST00000559100 MRPS33Q9Y291 106 aaKnown RBP1.98□□□□□ -2.09
GABPB1-209ENST00000559100 KLHDC2Q9Y2U9 406 aa1.98□□□□□ -2.09
GABPB1-209ENST00000559100 KLF2Q9Y5W3 355 aaPredicted RBP1.98□□□□□ -2.09
GABPB1-209ENST00000559100 AP4B1Q9Y6B7 739 aa1.98□□□□□ -2.09
GABPB1-209ENST00000559100 MAD1L1Q9Y6D9 718 aa1.98□□□□□ -2.09
GABPB1-209ENST00000559100 ARID2Q68CP9 1835 aa1.98□□□□□ -2.09
GABPB1-209ENST00000559100 CACNA1IQ9P0X4 2223 aa1.98□□□□□ -2.09
GABPB1-209ENST00000559100 KDRP35968 1356 aa1.98□□□□□ -2.09
GABPB1-209ENST00000559100 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP1.97□□□□□ -2.09
GABPB1-209ENST00000559100 RNF222A6NCQ9 220 aa1.97□□□□□ -2.09
GABPB1-209ENST00000559100 LRIT2A6NDA9 550 aa1.97□□□□□ -2.09
GABPB1-209ENST00000559100 IGLON5A6NGN9 336 aa1.97□□□□□ -2.09
GABPB1-209ENST00000559100 FAM47DPA6NHR8 397 aa1.97□□□□□ -2.09
GABPB1-209ENST00000559100 ASB14A6NK59 587 aa1.97□□□□□ -2.09
GABPB1-209ENST00000559100 PCP4L1A6NKN8 68 aa1.97□□□□□ -2.09
GABPB1-209ENST00000559100 CCDC169A6NNP5 214 aa1.97□□□□□ -2.09
GABPB1-209ENST00000559100 NPIPB9F8W1W9 429 aa1.97□□□□□ -2.09
GABPB1-209ENST00000559100 SGK1O00141 431 aa1.97□□□□□ -2.09
GABPB1-209ENST00000559100 BMPR1BO00238 502 aa1.97□□□□□ -2.09
GABPB1-209ENST00000559100 CLDN5O00501 218 aa1.97□□□□□ -2.09
GABPB1-209ENST00000559100 FBP2O00757 339 aa1.97□□□□□ -2.09
GABPB1-209ENST00000559100 ALOX15BO15296 676 aa1.97□□□□□ -2.09
GABPB1-209ENST00000559100 ZNF749O43361 778 aa1.97□□□□□ -2.09
GABPB1-209ENST00000559100 TPST2O60704 377 aa1.97□□□□□ -2.09
GABPB1-209ENST00000559100 SDC3O75056 442 aa1.97□□□□□ -2.09
GABPB1-209ENST00000559100 BCAS1O75363 584 aaPredicted RBP1.97□□□□□ -2.09
GABPB1-209ENST00000559100 SPAG6O75602 509 aa1.97□□□□□ -2.09
GABPB1-209ENST00000559100 CIB2O75838 187 aa1.97□□□□□ -2.09
GABPB1-209ENST00000559100 KRT36O76013 467 aa1.97□□□□□ -2.09
GABPB1-209ENST00000559100 ADCY5O95622 1261 aa1.97□□□□□ -2.09
GABPB1-209ENST00000559100 ECDO95905 644 aaPredicted RBP1.97□□□□□ -2.09
GABPB1-209ENST00000559100 IGSF6O95976 241 aa1.97□□□□□ -2.09
GABPB1-209ENST00000559100 IL1BP01584 269 aa1.97□□□□□ -2.09
GABPB1-209ENST00000559100 MT-ND1P03886 318 aa1.97□□□□□ -2.09
GABPB1-209ENST00000559100 IQCF3P0C7M6 154 aa1.97□□□□□ -2.09
GABPB1-209ENST00000559100 OR9G9P0C7N8 305 aa1.97□□□□□ -2.09
GABPB1-209ENST00000559100 HSD17B1P14061 328 aa1.97□□□□□ -2.09
GABPB1-209ENST00000559100 UQCRC2P22695 453 aa1.97□□□□□ -2.09
GABPB1-209ENST00000559100 EDNRAP25101 427 aa1.97□□□□□ -2.09
GABPB1-209ENST00000559100 GDI1P31150 447 aa1.97□□□□□ -2.09
GABPB1-209ENST00000559100 FCGR2CP31995 323 aa1.97□□□□□ -2.09
GABPB1-209ENST00000559100 CA8P35219 290 aa1.97□□□□□ -2.09
GABPB1-209ENST00000559100 RDXP35241 583 aaKnown RBP1.97□□□□□ -2.09
GABPB1-209ENST00000559100 MAGEA5P43359 124 aa1.97□□□□□ -2.09
GABPB1-209ENST00000559100 AIF1P55008 147 aa1.97□□□□□ -2.09
GABPB1-209ENST00000559100 ERVK-16P61578 105 aa1.97□□□□□ -2.09
GABPB1-209ENST00000559100 IL9RQ01113 521 aa1.97□□□□□ -2.09
GABPB1-209ENST00000559100 NAAAQ02083 359 aa1.97□□□□□ -2.09
GABPB1-209ENST00000559100 ZP4Q12836 540 aa1.97□□□□□ -2.09
GABPB1-209ENST00000559100 ZNF177Q13360 481 aaPredicted RBP1.97□□□□□ -2.09
GABPB1-209ENST00000559100 DDX39BQ13838 428 aaKnown RBP1.97□□□□□ -2.09
GABPB1-209ENST00000559100 EIF2B1Q14232 305 aaKnown RBP1.97□□□□□ -2.09
GABPB1-209ENST00000559100 MLF2Q15773 248 aaPredicted RBP1.97□□□□□ -2.09
GABPB1-209ENST00000559100 ZSWIM7Q19AV6 140 aa1.97□□□□□ -2.09
GABPB1-209ENST00000559100 KNOP1Q1ED39 458 aaKnown RBP1.97□□□□□ -2.09
GABPB1-209ENST00000559100 MTHFSDQ2M296 383 aaKnown RBP1.97□□□□□ -2.09
GABPB1-209ENST00000559100 ZNF699Q32M78 642 aa1.97□□□□□ -2.09
GABPB1-209ENST00000559100 DCAF4L1Q3SXM0 396 aa1.97□□□□□ -2.09
GABPB1-209ENST00000559100 LRIT3Q3SXY7 679 aa1.97□□□□□ -2.09
GABPB1-209ENST00000559100 ZNF876PQ49A33 203 aa1.97□□□□□ -2.09
GABPB1-209ENST00000559100 ACSF3Q4G176 576 aaPredicted RBP1.97□□□□□ -2.09
GABPB1-209ENST00000559100 AGAP7PQ5VUJ5 663 aa1.97□□□□□ -2.09
GABPB1-209ENST00000559100 TTC23Q5W5X9 447 aa1.97□□□□□ -2.09
GABPB1-209ENST00000559100 FAM53AQ6NSI3 398 aaPredicted RBP1.97□□□□□ -2.09
GABPB1-209ENST00000559100 KIAA1161Q6NSJ0 714 aa1.97□□□□□ -2.09
GABPB1-209ENST00000559100 BHLHB9Q6PI77 547 aa1.97□□□□□ -2.09
GABPB1-209ENST00000559100 APOOLQ6UXV4 268 aa1.97□□□□□ -2.09
GABPB1-209ENST00000559100 KIF6Q6ZMV9 814 aa1.97□□□□□ -2.09
GABPB1-209ENST00000559100 TAS2R42Q7RTR8 314 aa1.97□□□□□ -2.09
GABPB1-209ENST00000559100 EFL1Q7Z2Z2 1120 aaKnown RBP1.97□□□□□ -2.09
GABPB1-209ENST00000559100 NANOGNBQ7Z5D8 188 aa1.97□□□□□ -2.09
GABPB1-209ENST00000559100 GPR142Q7Z601 462 aa1.97□□□□□ -2.09
GABPB1-209ENST00000559100 NET1Q7Z628 596 aaPredicted RBP1.97□□□□□ -2.09
GABPB1-209ENST00000559100 ACOT1Q86TX2 421 aa1.97□□□□□ -2.09
GABPB1-209ENST00000559100 RPAINQ86UA6 219 aa1.97□□□□□ -2.09
GABPB1-209ENST00000559100 KCNMB4Q86W47 210 aa1.97□□□□□ -2.09
GABPB1-209ENST00000559100 CDH26Q8IXH8 852 aa1.97□□□□□ -2.09
GABPB1-209ENST00000559100 ZNF679Q8IYX0 411 aa1.97□□□□□ -2.09
GABPB1-209ENST00000559100 ZCCHC7Q8N3Z6 543 aaKnown RBP1.97□□□□□ -2.09
GABPB1-209ENST00000559100 NUP37Q8NFH4 326 aa1.97□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms