RNA–Protein interactions for RNA: ENST00000558910.2

TPM1-216, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-216ENST00000558910 RIBC1Q8N443 379 aaPredicted RBP11.06□□□□□ -0.64
TPM1-216ENST00000558910 OR8K3Q8NH51 312 aa11.06□□□□□ -0.64
TPM1-216ENST00000558910 C16orf52Q8NHV5 167 aa11.06□□□□□ -0.64
TPM1-216ENST00000558910 NUBPLQ8TB37 319 aa11.06□□□□□ -0.64
TPM1-216ENST00000558910 DIO2Q92813 273 aa11.06□□□□□ -0.64
TPM1-216ENST00000558910 SPACA9Q96E40 222 aaPredicted RBP11.06□□□□□ -0.64
TPM1-216ENST00000558910 FAM173AQ9BQD7 235 aa11.06□□□□□ -0.64
TPM1-216ENST00000558910 NXF5Q9H1B4 397 aaKnown RBP11.06□□□□□ -0.64
TPM1-216ENST00000558910 RRAGDQ9NQL2 400 aaPredicted RBP11.06□□□□□ -0.64
TPM1-216ENST00000558910 GIMAP4Q9NUV9 329 aa11.06□□□□□ -0.64
TPM1-216ENST00000558910 MAT2BQ9NZL9 334 aa11.06□□□□□ -0.64
TPM1-216ENST00000558910 LGALS13Q9UHV8 139 aa11.06□□□□□ -0.64
TPM1-216ENST00000558910 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.06□□□□□ -0.64
TPM1-216ENST00000558910 PRSS44E7EML9 344 aa11.05□□□□□ -0.64
TPM1-216ENST00000558910 GNB5O14775 395 aa11.05□□□□□ -0.64
TPM1-216ENST00000558910 LYPLA1O75608 230 aaPredicted RBP11.05□□□□□ -0.64
TPM1-216ENST00000558910 NEFHP12036 1026 aa11.05□□□□□ -0.64
TPM1-216ENST00000558910 GPX3P22352 226 aa11.05□□□□□ -0.64
TPM1-216ENST00000558910 TCEA1P23193 301 aaKnown RBP11.05□□□□□ -0.64
TPM1-216ENST00000558910 TACR1P25103 407 aa11.05□□□□□ -0.64
TPM1-216ENST00000558910 PTGS2P35354 604 aa11.05□□□□□ -0.64
TPM1-216ENST00000558910 CA7P43166 264 aa11.05□□□□□ -0.64
TPM1-216ENST00000558910 NCBP2P52298 156 aaKnown RBP eCLIP11.05□□□□□ -0.64
TPM1-216ENST00000558910 TRA2BP62995 288 aaKnown RBP11.05□□□□□ -0.64
TPM1-216ENST00000558910 RPL38P63173 70 aaKnown RBP11.05□□□□□ -0.64
TPM1-216ENST00000558910 MGAT2Q10469 447 aa11.05□□□□□ -0.64
TPM1-216ENST00000558910 HEPACAMQ14CZ8 416 aa11.05□□□□□ -0.64
TPM1-216ENST00000558910 MPEG1Q2M385 716 aa11.05□□□□□ -0.64
TPM1-216ENST00000558910 ZNF791Q3KP31 576 aaPredicted RBP11.05□□□□□ -0.64
TPM1-216ENST00000558910 ARL13AQ5H913 290 aaPredicted RBP11.05□□□□□ -0.64
TPM1-216ENST00000558910 NOXRED1Q6NXP6 359 aa11.05□□□□□ -0.64
TPM1-216ENST00000558910 GK5Q6ZS86 529 aa11.05□□□□□ -0.64
TPM1-216ENST00000558910 MAMDC2Q7Z304 686 aaPredicted RBP11.05□□□□□ -0.64
TPM1-216ENST00000558910 SZRD1Q7Z422 152 aa11.05□□□□□ -0.64
TPM1-216ENST00000558910 WDR53Q7Z5U6 358 aaPredicted RBP11.05□□□□□ -0.64
TPM1-216ENST00000558910 MRGPRGQ86SM5 289 aa11.05□□□□□ -0.64
TPM1-216ENST00000558910 GPALPP1Q8IXQ4 340 aa11.05□□□□□ -0.64
TPM1-216ENST00000558910 TMEM251Q8N6I4 163 aa11.05□□□□□ -0.64
TPM1-216ENST00000558910 ZNF615Q8N8J6 731 aa11.05□□□□□ -0.64
TPM1-216ENST00000558910 ZFP62Q8NB50 900 aaPredicted RBP11.05□□□□□ -0.64
TPM1-216ENST00000558910 POGLUT1Q8NBL1 392 aa11.05□□□□□ -0.64
TPM1-216ENST00000558910 OR2T11Q8NH01 316 aa11.05□□□□□ -0.64
TPM1-216ENST00000558910 EGLN2Q96KS0 407 aa11.05□□□□□ -0.64
TPM1-216ENST00000558910 ZIM3Q96PE6 472 aa11.05□□□□□ -0.64
TPM1-216ENST00000558910 TSSK3Q96PN8 268 aa11.05□□□□□ -0.64
TPM1-216ENST00000558910 DOHHQ9BU89 302 aa11.05□□□□□ -0.64
TPM1-216ENST00000558910 ROPN1BQ9BZX4 212 aaPredicted RBP11.05□□□□□ -0.64
TPM1-216ENST00000558910 ROPN1Q9HAT0 212 aaPredicted RBP11.05□□□□□ -0.64
TPM1-216ENST00000558910 LRTM1Q9HBL6 345 aa11.05□□□□□ -0.64
TPM1-216ENST00000558910 MIEF1Q9NQG6 463 aa11.05□□□□□ -0.64
TPM1-216ENST00000558910 BAIAP2L1Q9UHR4 511 aa11.05□□□□□ -0.64
TPM1-216ENST00000558910 NPFFR2Q9Y5X5 522 aa11.05□□□□□ -0.64
TPM1-216ENST00000558910 CENPEQ02224 2701 aa11.05□□□□□ -0.64
TPM1-216ENST00000558910 EML6Q6ZMW3 1958 aa11.05□□□□□ -0.64
TPM1-216ENST00000558910 OR6C76A6NM76 312 aa11.04□□□□□ -0.64
TPM1-216ENST00000558910 SLC28A1O00337 649 aa11.04□□□□□ -0.64
TPM1-216ENST00000558910 PRRG2O14669 202 aa11.04□□□□□ -0.64
TPM1-216ENST00000558910 PIP5K1BO14986 540 aa11.04□□□□□ -0.64
TPM1-216ENST00000558910 CTIFO43310 598 aaKnown RBP11.04□□□□□ -0.64
TPM1-216ENST00000558910 RGS14O43566 566 aa11.04□□□□□ -0.64
TPM1-216ENST00000558910 TRAPPC6AO75865 159 aa11.04□□□□□ -0.64
TPM1-216ENST00000558910 CBX7O95931 251 aa11.04□□□□□ -0.64
TPM1-216ENST00000558910 CHEK2O96017 543 aa11.04□□□□□ -0.64
TPM1-216ENST00000558910 RFPL3SP0C7P2 107 aa11.04□□□□□ -0.64
TPM1-216ENST00000558910 S1PR1P21453 382 aa11.04□□□□□ -0.64
TPM1-216ENST00000558910 RFX3P48380 749 aa11.04□□□□□ -0.64
TPM1-216ENST00000558910 MASP1P48740 699 aa11.04□□□□□ -0.64
TPM1-216ENST00000558910 NRG3P56975 720 aa11.04□□□□□ -0.64
TPM1-216ENST00000558910 ZNF763Q0D2J5 394 aa11.04□□□□□ -0.64
TPM1-216ENST00000558910 PLCXD2Q0VAA5 305 aa11.04□□□□□ -0.64
TPM1-216ENST00000558910 FUT7Q11130 342 aa11.04□□□□□ -0.64
TPM1-216ENST00000558910 ZNF155Q12901 538 aaPredicted RBP11.04□□□□□ -0.64
TPM1-216ENST00000558910 ZNF585AQ6P3V2 769 aa11.04□□□□□ -0.64
TPM1-216ENST00000558910 TMEM107Q6UX40 140 aa11.04□□□□□ -0.64
TPM1-216ENST00000558910 SLC22A16Q86VW1 577 aa11.04□□□□□ -0.64
TPM1-216ENST00000558910 DOLPP1Q86YN1 238 aa11.04□□□□□ -0.64
TPM1-216ENST00000558910 NUDCD3Q8IVD9 361 aa11.04□□□□□ -0.64
TPM1-216ENST00000558910 ANKRD42Q8N9B4 389 aa11.04□□□□□ -0.64
TPM1-216ENST00000558910 C7orf57Q8NEG2 295 aa11.04□□□□□ -0.64
TPM1-216ENST00000558910 MGARPQ8TDB4 240 aa11.04□□□□□ -0.64
TPM1-216ENST00000558910 TWIST2Q8WVJ9 160 aa11.04□□□□□ -0.64
TPM1-216ENST00000558910 SGCZQ96LD1 299 aa11.04□□□□□ -0.64
TPM1-216ENST00000558910 ZNF681Q96N22 645 aa11.04□□□□□ -0.64
TPM1-216ENST00000558910 C1orf50Q9BV19 199 aa11.04□□□□□ -0.64
TPM1-216ENST00000558910 TUBB1Q9H4B7 451 aa11.04□□□□□ -0.64
TPM1-216ENST00000558910 SLC35C2Q9NQQ7 365 aa11.04□□□□□ -0.64
TPM1-216ENST00000558910 DOPEY1Q5JWR5 2465 aa11.03□□□□□ -0.64
TPM1-216ENST00000558910 CDK2AP1O14519 115 aa11.03□□□□□ -0.64
TPM1-216ENST00000558910 TP53I11O14683 189 aa11.03□□□□□ -0.64
TPM1-216ENST00000558910 PEX11AO75192 247 aa11.03□□□□□ -0.64
TPM1-216ENST00000558910 REM1O75628 298 aa11.03□□□□□ -0.64
TPM1-216ENST00000558910 RSL1D1O76021 490 aaKnown RBP11.03□□□□□ -0.64
TPM1-216ENST00000558910 BPGMP07738 259 aa11.03□□□□□ -0.64
TPM1-216ENST00000558910 DRD2P14416 443 aa11.03□□□□□ -0.64
TPM1-216ENST00000558910 DDCP20711 480 aa11.03□□□□□ -0.64
TPM1-216ENST00000558910 GRNP28799 593 aaKnown RBP11.03□□□□□ -0.64
TPM1-216ENST00000558910 NTSP30990 170 aa11.03□□□□□ -0.64
TPM1-216ENST00000558910 GALNSP34059 522 aa11.03□□□□□ -0.64
TPM1-216ENST00000558910 MC3RP41968 323 aa11.03□□□□□ -0.64
TPM1-216ENST00000558910 CORO7P57737 925 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms