RNA–Protein interactions for RNA: ENST00000558117.1

RTF1-204, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-204ENST00000558117 MED10Q9BTT4 135 aa5.23□□□□□ -1.57
RTF1-204ENST00000558117 LRTM1Q9HBL6 345 aa5.23□□□□□ -1.57
RTF1-204ENST00000558117 SDF2L1Q9HCN8 221 aa5.23□□□□□ -1.57
RTF1-204ENST00000558117 SLC35C2Q9NQQ7 365 aa5.23□□□□□ -1.57
RTF1-204ENST00000558117 TRMT1Q9NXH9 659 aaKnown RBP5.23□□□□□ -1.57
RTF1-204ENST00000558117 TAB2Q9NYJ8 693 aa5.23□□□□□ -1.57
RTF1-204ENST00000558117 MRPL15Q9P015 296 aaKnown RBP5.23□□□□□ -1.57
RTF1-204ENST00000558117 MARCH4Q9P2E8 410 aaPredicted RBP5.23□□□□□ -1.57
RTF1-204ENST00000558117 DYSFO75923 2080 aa5.23□□□□□ -1.57
RTF1-204ENST00000558117 ATP8B3O60423 1300 aa5.23□□□□□ -1.57
RTF1-204ENST00000558117 A0A1W2PP11 408 aa5.22□□□□□ -1.57
RTF1-204ENST00000558117 A8MV72 311 aaPredicted RBP5.22□□□□□ -1.57
RTF1-204ENST00000558117 A8MXQ7 604 aa5.22□□□□□ -1.57
RTF1-204ENST00000558117 CPLX1O14810 134 aa5.22□□□□□ -1.57
RTF1-204ENST00000558117 CLIC2O15247 247 aa5.22□□□□□ -1.57
RTF1-204ENST00000558117 ZNHIT1O43257 154 aa5.22□□□□□ -1.57
RTF1-204ENST00000558117 KLHL41O60662 606 aa5.22□□□□□ -1.57
RTF1-204ENST00000558117 DAB1O75553 588 aa5.22□□□□□ -1.57
RTF1-204ENST00000558117 WISP2O76076 250 aa5.22□□□□□ -1.57
RTF1-204ENST00000558117 TOXO94900 526 aa5.22□□□□□ -1.57
RTF1-204ENST00000558117 SLU7O95391 586 aaKnown RBP5.22□□□□□ -1.57
RTF1-204ENST00000558117 MOCS3O95396 460 aa5.22□□□□□ -1.57
RTF1-204ENST00000558117 TNFP01375 233 aa5.22□□□□□ -1.57
RTF1-204ENST00000558117 FGF5P12034 268 aa5.22□□□□□ -1.57
RTF1-204ENST00000558117 ADRB3P13945 408 aa5.22□□□□□ -1.57
RTF1-204ENST00000558117 CHRNA3P32297 505 aa5.22□□□□□ -1.57
RTF1-204ENST00000558117 HPDP32754 393 aaPredicted RBP5.22□□□□□ -1.57
RTF1-204ENST00000558117 NUMBP49757 651 aa5.22□□□□□ -1.57
RTF1-204ENST00000558117 RPS24P62847 133 aaKnown RBP5.22□□□□□ -1.57
RTF1-204ENST00000558117 PITX1P78337 314 aaPredicted RBP5.22□□□□□ -1.57
RTF1-204ENST00000558117 PRAMEP78395 509 aa5.22□□□□□ -1.57
RTF1-204ENST00000558117 IL11RAQ14626 422 aa5.22□□□□□ -1.57
RTF1-204ENST00000558117 DLG2Q15700 870 aa5.22□□□□□ -1.57
RTF1-204ENST00000558117 TMEM35AQ53FP2 167 aa5.22□□□□□ -1.57
RTF1-204ENST00000558117 OTUD3Q5T2D3 398 aaPredicted RBP5.22□□□□□ -1.57
RTF1-204ENST00000558117 ADALQ6DHV7 355 aa5.22□□□□□ -1.57
RTF1-204ENST00000558117 OR7E24Q6IFN5 339 aa5.22□□□□□ -1.57
RTF1-204ENST00000558117 IYDQ6PHW0 289 aa5.22□□□□□ -1.57
RTF1-204ENST00000558117 WDR74Q6RFH5 385 aaPredicted RBP5.22□□□□□ -1.57
RTF1-204ENST00000558117 CCDC186Q7Z3E2 898 aa5.22□□□□□ -1.57
RTF1-204ENST00000558117 VPS36Q86VN1 386 aa5.22□□□□□ -1.57
RTF1-204ENST00000558117 CPSF7Q8N684 471 aaKnown RBP5.22□□□□□ -1.57
RTF1-204ENST00000558117 POMGNT2Q8NAT1 580 aa5.22□□□□□ -1.57
RTF1-204ENST00000558117 KIAA1524Q8TCG1 905 aa5.22□□□□□ -1.57
RTF1-204ENST00000558117 UTP15Q8TED0 518 aaKnown RBP5.22□□□□□ -1.57
RTF1-204ENST00000558117 PATE1Q8WXA2 126 aa5.22□□□□□ -1.57
RTF1-204ENST00000558117 SHC3Q92529 594 aa5.22□□□□□ -1.57
RTF1-204ENST00000558117 CCDC127Q96BQ5 260 aa5.22□□□□□ -1.57
RTF1-204ENST00000558117 PRICKLE1Q96MT3 831 aaPredicted RBP5.22□□□□□ -1.57
RTF1-204ENST00000558117 ABHD1Q96SE0 405 aa5.22□□□□□ -1.57
RTF1-204ENST00000558117 SRSF8Q9BRL6 282 aaKnown RBP5.22□□□□□ -1.57
RTF1-204ENST00000558117 FEM1AQ9BSK4 669 aa5.22□□□□□ -1.57
RTF1-204ENST00000558117 MMP28Q9H239 520 aa5.22□□□□□ -1.57
RTF1-204ENST00000558117 PLK3Q9H4B4 646 aa5.22□□□□□ -1.57
RTF1-204ENST00000558117 KLHL9Q9P2J3 617 aa5.22□□□□□ -1.57
RTF1-204ENST00000558117 UBA2Q9UBT2 640 aaPredicted RBP5.22□□□□□ -1.57
RTF1-204ENST00000558117 SEC14L3Q9UDX4 400 aa5.22□□□□□ -1.57
RTF1-204ENST00000558117 DLGAP4Q9Y2H0 992 aa5.22□□□□□ -1.57
RTF1-204ENST00000558117 ZNF835Q9Y2P0 537 aa5.22□□□□□ -1.57
RTF1-204ENST00000558117 STYXL1Q9Y6J8 313 aa5.22□□□□□ -1.57
RTF1-204ENST00000558117 ABCA1O95477 2261 aa5.22□□□□□ -1.57
RTF1-204ENST00000558117 NKX2-6A6NCS4 301 aa5.21□□□□□ -1.58
RTF1-204ENST00000558117 TMEM110-MUSTN1A8MSY1 372 aa5.21□□□□□ -1.58
RTF1-204ENST00000558117 CLDN4O14493 209 aa5.21□□□□□ -1.58
RTF1-204ENST00000558117 WDR1O75083 606 aa5.21□□□□□ -1.58
RTF1-204ENST00000558117 B3GALNT1O75752 331 aa5.21□□□□□ -1.58
RTF1-204ENST00000558117 FAM157CP0CG43 387 aa5.21□□□□□ -1.58
RTF1-204ENST00000558117 SELLP14151 372 aa5.21□□□□□ -1.58
RTF1-204ENST00000558117 POLR2CP19387 275 aaPredicted RBP5.21□□□□□ -1.58
RTF1-204ENST00000558117 UGT1A4P22310 534 aa5.21□□□□□ -1.58
RTF1-204ENST00000558117 TLX1P31314 330 aaPredicted RBP5.21□□□□□ -1.58
RTF1-204ENST00000558117 GP5P40197 560 aa5.21□□□□□ -1.58
RTF1-204ENST00000558117 ARCN1P48444 511 aaKnown RBP5.21□□□□□ -1.58
RTF1-204ENST00000558117 EEF1A1P68104 462 aaKnown RBP5.21□□□□□ -1.58
RTF1-204ENST00000558117 RBPJQ06330 500 aa5.21□□□□□ -1.58
RTF1-204ENST00000558117 CDH18Q13634 790 aa5.21□□□□□ -1.58
RTF1-204ENST00000558117 CRYMQ14894 314 aa5.21□□□□□ -1.58
RTF1-204ENST00000558117 SLMAPQ14BN4 828 aa5.21□□□□□ -1.58
RTF1-204ENST00000558117 RBBP5Q15291 538 aaKnown RBP5.21□□□□□ -1.58
RTF1-204ENST00000558117 MYLK3Q32MK0 819 aa5.21□□□□□ -1.58
RTF1-204ENST00000558117 EEF1A1P5Q5VTE0 462 aa5.21□□□□□ -1.58
RTF1-204ENST00000558117 ACSM2BQ68CK6 577 aa5.21□□□□□ -1.58
RTF1-204ENST00000558117 Q6ZPB1 254 aaPredicted RBP5.21□□□□□ -1.58
RTF1-204ENST00000558117 PIWIL3Q7Z3Z3 882 aaKnown RBP5.21□□□□□ -1.58
RTF1-204ENST00000558117 LCA5Q86VQ0 697 aa5.21□□□□□ -1.58
RTF1-204ENST00000558117 LINC00346Q8IVM7 164 aa5.21□□□□□ -1.58
RTF1-204ENST00000558117 ZNF619Q8N2I2 560 aa5.21□□□□□ -1.58
RTF1-204ENST00000558117 POGLUT1Q8NBL1 392 aa5.21□□□□□ -1.58
RTF1-204ENST00000558117 KIAA0895Q8NCT3 520 aa5.21□□□□□ -1.58
RTF1-204ENST00000558117 DMBX1Q8NFW5 382 aa5.21□□□□□ -1.58
RTF1-204ENST00000558117 OR2A12Q8NGT7 310 aa5.21□□□□□ -1.58
RTF1-204ENST00000558117 PHF10Q8WUB8 498 aaKnown RBP5.21□□□□□ -1.58
RTF1-204ENST00000558117 OR1E3Q8WZA6 343 aa5.21□□□□□ -1.58
RTF1-204ENST00000558117 PTP4A1Q93096 173 aa5.21□□□□□ -1.58
RTF1-204ENST00000558117 ELMO2Q96JJ3 720 aa5.21□□□□□ -1.58
RTF1-204ENST00000558117 OR6C1Q96RD1 312 aa5.21□□□□□ -1.58
RTF1-204ENST00000558117 TEX12Q9BXU0 123 aa5.21□□□□□ -1.58
RTF1-204ENST00000558117 MTMR12Q9C0I1 747 aa5.21□□□□□ -1.58
RTF1-204ENST00000558117 DNAI2Q9GZS0 605 aa5.21□□□□□ -1.58
RTF1-204ENST00000558117 LRMDAQ9H2I8 198 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms