RNA–Protein interactions for RNA: ENST00000558040.5

SNX1-203, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-203ENST00000558040 TMEM38AQ9H6F2 299 aa15.72■□□□□ 0.11
SNX1-203ENST00000558040 ANKRA2Q9H9E1 313 aa15.72■□□□□ 0.11
SNX1-203ENST00000558040 ASCL3Q9NQ33 180 aa15.72■□□□□ 0.11
SNX1-203ENST00000558040 PRODH2Q9UF12 536 aa15.72■□□□□ 0.11
SNX1-203ENST00000558040 MAGEL2Q9UJ55 1249 aa15.72■□□□□ 0.11
SNX1-203ENST00000558040 TCFL5Q9UL49 500 aa15.72■□□□□ 0.11
SNX1-203ENST00000558040 CFL2Q9Y281 166 aa15.72■□□□□ 0.11
SNX1-203ENST00000558040 SNX13Q9Y5W8 968 aa15.72■□□□□ 0.11
SNX1-203ENST00000558040 AK5Q9Y6K8 562 aa15.72■□□□□ 0.11
SNX1-203ENST00000558040 NUP214P35658 2090 aaPredicted RBP15.72■□□□□ 0.11
SNX1-203ENST00000558040 PTPRZ1P23471 2315 aaPredicted RBP15.72■□□□□ 0.11
SNX1-203ENST00000558040 SAGE2PA6NJ88 616 aa15.71■□□□□ 0.11
SNX1-203ENST00000558040 TTC36A6NLP5 189 aa15.71■□□□□ 0.11
SNX1-203ENST00000558040 SORBS2O94875 1100 aaKnown RBP15.71■□□□□ 0.11
SNX1-203ENST00000558040 UMODP07911 640 aa15.71■□□□□ 0.11
SNX1-203ENST00000558040 SSTR4P31391 388 aa15.71■□□□□ 0.11
SNX1-203ENST00000558040 MSX2P35548 267 aaPredicted RBP15.71■□□□□ 0.11
SNX1-203ENST00000558040 DLSTP36957 453 aa15.71■□□□□ 0.11
SNX1-203ENST00000558040 ZNF155Q12901 538 aaPredicted RBP15.71■□□□□ 0.11
SNX1-203ENST00000558040 FLOT2Q14254 428 aa15.71■□□□□ 0.11
SNX1-203ENST00000558040 GNA13Q14344 377 aa15.71■□□□□ 0.11
SNX1-203ENST00000558040 PUM1Q14671 1186 aaKnown RBP eCLIP15.71■□□□□ 0.11
SNX1-203ENST00000558040 FXNQ16595 210 aa15.71■□□□□ 0.11
SNX1-203ENST00000558040 ZNF630Q2M218 657 aaPredicted RBP15.71■□□□□ 0.11
SNX1-203ENST00000558040 VMACQ2NL98 169 aa15.71■□□□□ 0.11
SNX1-203ENST00000558040 ATAD3BQ5T9A4 648 aa15.71■□□□□ 0.11
SNX1-203ENST00000558040 RNF111Q6ZNA4 994 aa15.71■□□□□ 0.11
SNX1-203ENST00000558040 DHFR2Q86XF0 187 aa15.71■□□□□ 0.11
SNX1-203ENST00000558040 PROSER1Q86XN7 944 aa15.71■□□□□ 0.11
SNX1-203ENST00000558040 ZZZ3Q8IYH5 903 aa15.71■□□□□ 0.11
SNX1-203ENST00000558040 C10orf111Q8N326 155 aa15.71■□□□□ 0.11
SNX1-203ENST00000558040 ADAMTS15Q8TE58 950 aa15.71■□□□□ 0.11
SNX1-203ENST00000558040 VPS50Q96JG6 964 aa15.71■□□□□ 0.11
SNX1-203ENST00000558040 OR8D2Q9GZM6 311 aa15.71■□□□□ 0.11
SNX1-203ENST00000558040 OR10A5Q9H207 317 aa15.71■□□□□ 0.11
SNX1-203ENST00000558040 A4GALTQ9NPC4 353 aa15.71■□□□□ 0.11
SNX1-203ENST00000558040 EXD2Q9NVH0 621 aa15.71■□□□□ 0.11
SNX1-203ENST00000558040 P2RX2Q9UBL9 471 aa15.71■□□□□ 0.11
SNX1-203ENST00000558040 KCND3Q9UK17 655 aa15.71■□□□□ 0.11
SNX1-203ENST00000558040 PCDHGB3Q9Y5G1 929 aa15.71■□□□□ 0.11
SNX1-203ENST00000558040 SDK2Q58EX2 2172 aa15.7■□□□□ 0.1
SNX1-203ENST00000558040 KNTC1P50748 2209 aa15.7■□□□□ 0.1
SNX1-203ENST00000558040 LOC102723996A0A087X1L8 192 aa15.7■□□□□ 0.1
SNX1-203ENST00000558040 HMGN4O00479 90 aa15.7■□□□□ 0.1
SNX1-203ENST00000558040 DDAH2O95865 285 aa15.7■□□□□ 0.1
SNX1-203ENST00000558040 ALOX5P09917 674 aa15.7■□□□□ 0.1
SNX1-203ENST00000558040 OR12D1P0DN82 309 aa15.7■□□□□ 0.1
SNX1-203ENST00000558040 ARAFP10398 606 aa15.7■□□□□ 0.1
SNX1-203ENST00000558040 GGT1P19440 569 aa15.7■□□□□ 0.1
SNX1-203ENST00000558040 MMP11P24347 488 aa15.7■□□□□ 0.1
SNX1-203ENST00000558040 PCGF2P35227 344 aa15.7■□□□□ 0.1
SNX1-203ENST00000558040 FOXC1Q12948 553 aa15.7■□□□□ 0.1
SNX1-203ENST00000558040 CAMK2BQ13554 666 aa15.7■□□□□ 0.1
SNX1-203ENST00000558040 VEZF1Q14119 521 aa15.7■□□□□ 0.1
SNX1-203ENST00000558040 SSPNQ14714 243 aa15.7■□□□□ 0.1
SNX1-203ENST00000558040 INTS11Q5TA45 600 aaKnown RBP15.7■□□□□ 0.1
SNX1-203ENST00000558040 PAPD4Q6PIY7 484 aaKnown RBP15.7■□□□□ 0.1
SNX1-203ENST00000558040 PTOV1Q86YD1 416 aa15.7■□□□□ 0.1
SNX1-203ENST00000558040 IL22RA1Q8N6P7 574 aa15.7■□□□□ 0.1
SNX1-203ENST00000558040 METTL25Q8N6Q8 603 aa15.7■□□□□ 0.1
SNX1-203ENST00000558040 ZNF721Q8TF20 911 aa15.7■□□□□ 0.1
SNX1-203ENST00000558040 XAGE5Q8WWM1 108 aa15.7■□□□□ 0.1
SNX1-203ENST00000558040 SLC9A6Q92581 669 aa15.7■□□□□ 0.1
SNX1-203ENST00000558040 KIAA1143Q96AT1 154 aaPredicted RBP15.7■□□□□ 0.1
SNX1-203ENST00000558040 NACC2Q96BF6 587 aa15.7■□□□□ 0.1
SNX1-203ENST00000558040 C16orf58Q96GQ5 468 aa15.7■□□□□ 0.1
SNX1-203ENST00000558040 LRGUKQ96M69 825 aa15.7■□□□□ 0.1
SNX1-203ENST00000558040 OR7D2Q96RA2 312 aa15.7■□□□□ 0.1
SNX1-203ENST00000558040 STACQ99469 402 aa15.7■□□□□ 0.1
SNX1-203ENST00000558040 YIPF4Q9BSR8 244 aa15.7■□□□□ 0.1
SNX1-203ENST00000558040 PCDHAC1Q9H158 963 aa15.7■□□□□ 0.1
SNX1-203ENST00000558040 SERHL2Q9H4I8 314 aa15.7■□□□□ 0.1
SNX1-203ENST00000558040 FOLH1BQ9HBA9 442 aa15.7■□□□□ 0.1
SNX1-203ENST00000558040 GIN1Q9NXP7 522 aa15.7■□□□□ 0.1
SNX1-203ENST00000558040 ACTR3BQ9P1U1 418 aa15.7■□□□□ 0.1
SNX1-203ENST00000558040 GMPR2Q9P2T1 348 aaKnown RBP15.7■□□□□ 0.1
SNX1-203ENST00000558040 EGFL7Q9UHF1 273 aa15.7■□□□□ 0.1
SNX1-203ENST00000558040 USP22Q9UPT9 525 aa15.7■□□□□ 0.1
SNX1-203ENST00000558040 ANGPT4Q9Y264 503 aa15.7■□□□□ 0.1
SNX1-203ENST00000558040 ZNF451Q9Y4E5 1061 aa15.7■□□□□ 0.1
SNX1-203ENST00000558040 HEMK1Q9Y5R4 338 aaPredicted RBP15.7■□□□□ 0.1
SNX1-203ENST00000558040 WDR87Q6ZQQ6 2873 aa15.69■□□□□ 0.1
SNX1-203ENST00000558040 OR6C76A6NM76 312 aa15.69■□□□□ 0.1
SNX1-203ENST00000558040 C5orf58C9J3I9 102 aa15.69■□□□□ 0.1
SNX1-203ENST00000558040 HRKO00198 91 aa15.69■□□□□ 0.1
SNX1-203ENST00000558040 CXCR6O00574 342 aa15.69■□□□□ 0.1
SNX1-203ENST00000558040 ACOT8O14734 319 aa15.69■□□□□ 0.1
SNX1-203ENST00000558040 ARPC2O15144 300 aa15.69■□□□□ 0.1
SNX1-203ENST00000558040 IGKV3-11P04433 115 aa15.69■□□□□ 0.1
SNX1-203ENST00000558040 NUDT7P0C024 238 aa15.69■□□□□ 0.1
SNX1-203ENST00000558040 LIPCP11150 499 aa15.69■□□□□ 0.1
SNX1-203ENST00000558040 SOX11P35716 441 aa15.69■□□□□ 0.1
SNX1-203ENST00000558040 MAN2A2P49641 1150 aa15.69■□□□□ 0.1
SNX1-203ENST00000558040 EMDP50402 254 aa15.69■□□□□ 0.1
SNX1-203ENST00000558040 SLC37A1P57057 533 aa15.69■□□□□ 0.1
SNX1-203ENST00000558040 CDK6Q00534 326 aa15.69■□□□□ 0.1
SNX1-203ENST00000558040 DUSP8Q13202 625 aa15.69■□□□□ 0.1
SNX1-203ENST00000558040 SCARB2Q14108 478 aa15.69■□□□□ 0.1
SNX1-203ENST00000558040 ADRM1Q16186 407 aa15.69■□□□□ 0.1
SNX1-203ENST00000558040 GLYATQ6IB77 296 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms