RNA–Protein interactions for RNA: ENST00000557342.5

SLIRP-209, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 1 (best) BASIC

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-209ENST00000557342 RPS6KA2Q15349 733 aa11.51□□□□□ -0.57
SLIRP-209ENST00000557342 PRSS53Q2L4Q9 553 aa11.51□□□□□ -0.57
SLIRP-209ENST00000557342 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.51□□□□□ -0.575e-7■■■■□ 21.9
SLIRP-209ENST00000557342 TBCELQ5QJ74 424 aa11.51□□□□□ -0.57
SLIRP-209ENST00000557342 FAM47EQ6ZV65 393 aa11.51□□□□□ -0.57
SLIRP-209ENST00000557342 FBXW8Q8N3Y1 598 aa11.51□□□□□ -0.57
SLIRP-209ENST00000557342 NATD1Q8N6N6 113 aa11.51□□□□□ -0.57
SLIRP-209ENST00000557342 FAM13CQ8NE31 585 aa11.51□□□□□ -0.57
SLIRP-209ENST00000557342 OR2M7Q8NG81 312 aa11.51□□□□□ -0.57
SLIRP-209ENST00000557342 OR7G2Q8NG99 324 aa11.51□□□□□ -0.57
SLIRP-209ENST00000557342 CLHC1Q8NHS4 586 aa11.51□□□□□ -0.57
SLIRP-209ENST00000557342 PAQR8Q8TEZ7 354 aa11.51□□□□□ -0.57
SLIRP-209ENST00000557342 AMDHD1Q96NU7 426 aa11.51□□□□□ -0.57
SLIRP-209ENST00000557342 SECISBP2Q96T21 854 aaKnown RBP11.51□□□□□ -0.57
SLIRP-209ENST00000557342 PRPF18Q99633 342 aaKnown RBP11.51□□□□□ -0.57
SLIRP-209ENST00000557342 SH3GL2Q99962 352 aa11.51□□□□□ -0.57
SLIRP-209ENST00000557342 C1orf50Q9BV19 199 aa11.51□□□□□ -0.57
SLIRP-209ENST00000557342 ITPAQ9BY32 194 aa11.51□□□□□ -0.57
SLIRP-209ENST00000557342 NXF5Q9H1B4 397 aaKnown RBP11.51□□□□□ -0.57
SLIRP-209ENST00000557342 SH2D2AQ9NP31 389 aa11.51□□□□□ -0.57
SLIRP-209ENST00000557342 ACSS1Q9NUB1 689 aaPredicted RBP11.51□□□□□ -0.57
SLIRP-209ENST00000557342 ATAD3AQ9NVI7 634 aa11.51□□□□□ -0.57
SLIRP-209ENST00000557342 ZNF446Q9NWS9 450 aa11.51□□□□□ -0.57
SLIRP-209ENST00000557342 ASIC5Q9NY37 505 aa11.51□□□□□ -0.57
SLIRP-209ENST00000557342 GIMAP2Q9UG22 337 aa11.51□□□□□ -0.57
SLIRP-209ENST00000557342 ATP6V1HQ9UI12 483 aa11.51□□□□□ -0.57
SLIRP-209ENST00000557342 NPIPA1Q9UND3 350 aa11.51□□□□□ -0.57
SLIRP-209ENST00000557342 DTX4Q9Y2E6 619 aa11.51□□□□□ -0.57
SLIRP-209ENST00000557342 GTF3C1Q12789 2109 aa11.5□□□□□ -0.57
SLIRP-209ENST00000557342 CLEC18AA5D8T8 446 aa11.5□□□□□ -0.57
SLIRP-209ENST00000557342 FRG2CA6NGY1 282 aa11.5□□□□□ -0.57
SLIRP-209ENST00000557342 TRPC5OSA6NMA1 111 aa11.5□□□□□ -0.57
SLIRP-209ENST00000557342 KLF11O14901 512 aa11.5□□□□□ -0.57
SLIRP-209ENST00000557342 SCAMP2O15127 329 aaKnown RBP11.5□□□□□ -0.57
SLIRP-209ENST00000557342 TO15178 435 aa11.5□□□□□ -0.57
SLIRP-209ENST00000557342 ASNA1O43681 348 aa11.5□□□□□ -0.57
SLIRP-209ENST00000557342 SNNO75324 88 aaPredicted RBP11.5□□□□□ -0.57
SLIRP-209ENST00000557342 UNC5CO95185 931 aa11.5□□□□□ -0.57
SLIRP-209ENST00000557342 CCL3P10147 92 aa11.5□□□□□ -0.57
SLIRP-209ENST00000557342 PRPS1L1P21108 318 aa11.5□□□□□ -0.57
SLIRP-209ENST00000557342 ABCD3P28288 659 aa11.5□□□□□ -0.57
SLIRP-209ENST00000557342 GPC1P35052 558 aa11.5□□□□□ -0.57
SLIRP-209ENST00000557342 MC3RP41968 323 aa11.5□□□□□ -0.57
SLIRP-209ENST00000557342 FRKP42685 505 aaPredicted RBP11.5□□□□□ -0.57
SLIRP-209ENST00000557342 MANFP55145 182 aaKnown RBP11.5□□□□□ -0.57
SLIRP-209ENST00000557342 UBAP2LQ14157 1087 aaKnown RBP11.5□□□□□ -0.57
SLIRP-209ENST00000557342 TTMPQ5BVD1 217 aa11.5□□□□□ -0.57
SLIRP-209ENST00000557342 TMEM107Q6UX40 140 aa11.5□□□□□ -0.57
SLIRP-209ENST00000557342 CLEC18BQ6UXF7 455 aa11.5□□□□□ -0.57
SLIRP-209ENST00000557342 SLC22A16Q86VW1 577 aa11.5□□□□□ -0.57
SLIRP-209ENST00000557342 SIAH3Q8IW03 269 aa11.5□□□□□ -0.57
SLIRP-209ENST00000557342 GHDCQ8N2G8 530 aa11.5□□□□□ -0.57
SLIRP-209ENST00000557342 CLEC18CQ8NCF0 446 aa11.5□□□□□ -0.57
SLIRP-209ENST00000557342 SIMC1Q8NDZ2 872 aa11.5□□□□□ -0.57
SLIRP-209ENST00000557342 OR10G3Q8NGC4 313 aa11.5□□□□□ -0.57
SLIRP-209ENST00000557342 ELP4Q96EB1 424 aa11.5□□□□□ -0.57
SLIRP-209ENST00000557342 PPP1R36Q96LQ0 422 aa11.5□□□□□ -0.57
SLIRP-209ENST00000557342 BTBD9Q96Q07 612 aa11.5□□□□□ -0.57
SLIRP-209ENST00000557342 NUF2Q9BZD4 464 aa11.5□□□□□ -0.57
SLIRP-209ENST00000557342 ACBD3Q9H3P7 528 aa11.5□□□□□ -0.57
SLIRP-209ENST00000557342 AKTIPQ9H8T0 292 aa11.5□□□□□ -0.57
SLIRP-209ENST00000557342 MEAF6Q9HAF1 191 aa11.5□□□□□ -0.57
SLIRP-209ENST00000557342 IL1RL2Q9HB29 575 aa11.5□□□□□ -0.57
SLIRP-209ENST00000557342 FOLH1BQ9HBA9 442 aa11.5□□□□□ -0.57
SLIRP-209ENST00000557342 DEPPQ9NTK1 212 aa11.5□□□□□ -0.57
SLIRP-209ENST00000557342 DDX18Q9NVP1 670 aaKnown RBP11.5□□□□□ -0.57
SLIRP-209ENST00000557342 PNPOQ9NVS9 261 aa11.5□□□□□ -0.57
SLIRP-209ENST00000557342 C19orf53Q9UNZ5 99 aaPredicted RBP11.5□□□□□ -0.57
SLIRP-209ENST00000557342 GPR55Q9Y2T6 319 aaPredicted RBP11.5□□□□□ -0.57
SLIRP-209ENST00000557342 CHCHD2Q9Y6H1 151 aaPredicted RBP11.5□□□□□ -0.57
SLIRP-209ENST00000557342 A0A1B0GUH1 482 aa11.49□□□□□ -0.57
SLIRP-209ENST00000557342 ANKRD33BA6NCL7 494 aa11.49□□□□□ -0.57
SLIRP-209ENST00000557342 TTC36A6NLP5 189 aa11.49□□□□□ -0.57
SLIRP-209ENST00000557342 HDAC3O15379 428 aa11.49□□□□□ -0.57
SLIRP-209ENST00000557342 ERN1O75460 977 aaKnown RBP11.49□□□□□ -0.57
SLIRP-209ENST00000557342 PPM1BO75688 479 aa11.49□□□□□ -0.57
SLIRP-209ENST00000557342 AGFG2O95081 481 aa11.49□□□□□ -0.57
SLIRP-209ENST00000557342 ZIC2O95409 532 aaPredicted RBP11.49□□□□□ -0.57
SLIRP-209ENST00000557342 LBPP18428 481 aa11.49□□□□□ -0.57
SLIRP-209ENST00000557342 KCNK10P57789 538 aa11.49□□□□□ -0.57
SLIRP-209ENST00000557342 PPIAP62937 165 aaKnown RBP11.49□□□□□ -0.57
SLIRP-209ENST00000557342 KCNJ2P63252 427 aa11.49□□□□□ -0.57
SLIRP-209ENST00000557342 PLCXD2Q0VAA5 305 aa11.49□□□□□ -0.57
SLIRP-209ENST00000557342 HSPB3Q12988 150 aa11.49□□□□□ -0.57
SLIRP-209ENST00000557342 PTGR1Q14914 329 aa11.49□□□□□ -0.57
SLIRP-209ENST00000557342 MLC1Q15049 377 aa11.49□□□□□ -0.57
SLIRP-209ENST00000557342 ZNHIT3Q15649 155 aaPredicted RBP11.49□□□□□ -0.57
SLIRP-209ENST00000557342 NNATQ16517 81 aa11.49□□□□□ -0.57
SLIRP-209ENST00000557342 ZNF385BQ569K4 471 aa11.49□□□□□ -0.57
SLIRP-209ENST00000557342 RNFT1Q5M7Z0 435 aa11.49□□□□□ -0.57
SLIRP-209ENST00000557342 CPTPQ5TA50 214 aa11.49□□□□□ -0.57
SLIRP-209ENST00000557342 ANKRD26P1Q6NSI1 321 aa11.49□□□□□ -0.57
SLIRP-209ENST00000557342 PAOXQ6QHF9 649 aa11.49□□□□□ -0.57
SLIRP-209ENST00000557342 NUP54Q7Z3B4 507 aa11.49□□□□□ -0.57
SLIRP-209ENST00000557342 PRR22Q8IZ63 422 aa11.49□□□□□ -0.57
SLIRP-209ENST00000557342 SLC34A3Q8N130 599 aa11.49□□□□□ -0.57
SLIRP-209ENST00000557342 OR2L13Q8N349 312 aa11.49□□□□□ -0.57
SLIRP-209ENST00000557342 OR5M3Q8NGP4 307 aa11.49□□□□□ -0.57
SLIRP-209ENST00000557342 CEP70Q8NHQ1 597 aa11.49□□□□□ -0.57
SLIRP-209ENST00000557342 SPPL2AQ8TCT8 520 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms