RNA–Protein interactions for RNA: ENST00000556680.1

TRAV15-201, Transcript of T cell receptor alpha variable 15 (pseudogene), humanhuman

BASIC

Gene TRAV15, Length 249 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV15-201ENST00000556680 ZNF689Q96CS4 500 aaPredicted RBP3.81□□□□□ -1.8
TRAV15-201ENST00000556680 ALG14Q96F25 216 aa3.81□□□□□ -1.8
TRAV15-201ENST00000556680 PGM2Q96G03 612 aa3.81□□□□□ -1.8
TRAV15-201ENST00000556680 NPY6RQ99463 290 aa3.81□□□□□ -1.8
TRAV15-201ENST00000556680 PKMYT1Q99640 499 aa3.81□□□□□ -1.8
TRAV15-201ENST00000556680 UBXN6Q9BZV1 441 aa3.81□□□□□ -1.8
TRAV15-201ENST00000556680 NMUR1Q9HB89 426 aa3.81□□□□□ -1.8
TRAV15-201ENST00000556680 TRPV4Q9HBA0 871 aa3.81□□□□□ -1.8
TRAV15-201ENST00000556680 CSNK1G1Q9HCP0 422 aa3.81□□□□□ -1.8
TRAV15-201ENST00000556680 MRPL17Q9NRX2 175 aaKnown RBP3.81□□□□□ -1.8
TRAV15-201ENST00000556680 ABCC13Q9NSE7 274 aa3.81□□□□□ -1.8
TRAV15-201ENST00000556680 ZFP57Q9NU63 452 aa3.81□□□□□ -1.8
TRAV15-201ENST00000556680 PIGVQ9NUD9 493 aa3.81□□□□□ -1.8
TRAV15-201ENST00000556680 SEPT10Q9P0V9 454 aa3.81□□□□□ -1.8
TRAV15-201ENST00000556680 MTRF1LQ9UGC7 380 aaKnown RBP3.81□□□□□ -1.8
TRAV15-201ENST00000556680 SLC12A6Q9UHW9 1150 aa3.81□□□□□ -1.8
TRAV15-201ENST00000556680 SNX24Q9Y343 169 aa3.81□□□□□ -1.8
TRAV15-201ENST00000556680 SNX10Q9Y5X0 201 aa3.81□□□□□ -1.8
TRAV15-201ENST00000556680 CEP192Q8TEP8 1941 aa3.8□□□□□ -1.8
TRAV15-201ENST00000556680 PLXNB3Q9ULL4 1909 aa3.8□□□□□ -1.8
TRAV15-201ENST00000556680 TRAV24A0A0B4J272 114 aa3.8□□□□□ -1.8
TRAV15-201ENST00000556680 A0A1W2PPK0 400 aa3.8□□□□□ -1.8
TRAV15-201ENST00000556680 APOC4-APOC2K7ER74 178 aa3.8□□□□□ -1.8
TRAV15-201ENST00000556680 ARPC2O15144 300 aa3.8□□□□□ -1.8
TRAV15-201ENST00000556680 SLC7A4O43246 635 aa3.8□□□□□ -1.8
TRAV15-201ENST00000556680 KCNAB3O43448 404 aa3.8□□□□□ -1.8
TRAV15-201ENST00000556680 CIDEAO60543 219 aa3.8□□□□□ -1.8
TRAV15-201ENST00000556680 SEC24AO95486 1093 aa3.8□□□□□ -1.8
TRAV15-201ENST00000556680 CXCL14O95715 111 aa3.8□□□□□ -1.8
TRAV15-201ENST00000556680 APOC2P02655 101 aa3.8□□□□□ -1.8
TRAV15-201ENST00000556680 PRSS1P07477 247 aa3.8□□□□□ -1.8
TRAV15-201ENST00000556680 MBL2P11226 248 aaPredicted RBP3.8□□□□□ -1.8
TRAV15-201ENST00000556680 LIFP15018 202 aa3.8□□□□□ -1.8
TRAV15-201ENST00000556680 H2AFXP16104 143 aaPredicted RBP3.8□□□□□ -1.8
TRAV15-201ENST00000556680 EFNA1P20827 205 aaPredicted RBP3.8□□□□□ -1.8
TRAV15-201ENST00000556680 CA4P22748 312 aa3.8□□□□□ -1.8
TRAV15-201ENST00000556680 CSTF2P33240 577 aaKnown RBP eCLIP3.8□□□□□ -1.8
TRAV15-201ENST00000556680 MAGEA11P43364 429 aa3.8□□□□□ -1.8
TRAV15-201ENST00000556680 RPL34P49207 117 aaKnown RBP3.8□□□□□ -1.8
TRAV15-201ENST00000556680 TUFMP49411 452 aaKnown RBP3.8□□□□□ -1.8
TRAV15-201ENST00000556680 PLTPP55058 493 aa3.8□□□□□ -1.8
TRAV15-201ENST00000556680 VCPP55072 806 aaKnown RBP3.8□□□□□ -1.8
TRAV15-201ENST00000556680 BASP1P80723 227 aaKnown RBP3.8□□□□□ -1.8
TRAV15-201ENST00000556680 AP1B1Q10567 949 aa3.8□□□□□ -1.8
TRAV15-201ENST00000556680 TWF1Q12792 350 aa3.8□□□□□ -1.8
TRAV15-201ENST00000556680 ILF3Q12906 894 aaKnown RBP eCLIP3.8□□□□□ -1.8
TRAV15-201ENST00000556680 TAF10Q12962 218 aa3.8□□□□□ -1.8
TRAV15-201ENST00000556680 CUL1Q13616 776 aa3.8□□□□□ -1.8
TRAV15-201ENST00000556680 NFE2L1Q14494 772 aa3.8□□□□□ -1.8
TRAV15-201ENST00000556680 E2F5Q15329 346 aa3.8□□□□□ -1.8
TRAV15-201ENST00000556680 SIX1Q15475 284 aaPredicted RBP3.8□□□□□ -1.8
TRAV15-201ENST00000556680 UGP2Q16851 508 aa3.8□□□□□ -1.8
TRAV15-201ENST00000556680 CTU2Q2VPK5 515 aaKnown RBP3.8□□□□□ -1.8
TRAV15-201ENST00000556680 HSP90B2PQ58FF3 399 aa3.8□□□□□ -1.8
TRAV15-201ENST00000556680 SPDYCQ5MJ68 293 aa3.8□□□□□ -1.8
TRAV15-201ENST00000556680 BRMS1LQ5PSV4 323 aa3.8□□□□□ -1.8
TRAV15-201ENST00000556680 PPM1LQ5SGD2 360 aa3.8□□□□□ -1.8
TRAV15-201ENST00000556680 CASC4Q6P4E1 433 aa3.8□□□□□ -1.8
TRAV15-201ENST00000556680 ZNF771Q7L3S4 317 aaPredicted RBP3.8□□□□□ -1.8
TRAV15-201ENST00000556680 PRUNE1Q86TP1 453 aa3.8□□□□□ -1.8
TRAV15-201ENST00000556680 AMIGO1Q86WK6 493 aa3.8□□□□□ -1.8
TRAV15-201ENST00000556680 CDKL3Q8IVW4 592 aaPredicted RBP3.8□□□□□ -1.8
TRAV15-201ENST00000556680 MMD2Q8IY49 270 aa3.8□□□□□ -1.8
TRAV15-201ENST00000556680 MAPKAPK5-AS1Q8N8E1 139 aa3.8□□□□□ -1.8
TRAV15-201ENST00000556680 CCNYQ8ND76 341 aa3.8□□□□□ -1.8
TRAV15-201ENST00000556680 DQX1Q8TE96 717 aaKnown RBP3.8□□□□□ -1.8
TRAV15-201ENST00000556680 CASP10Q92851 521 aa3.8□□□□□ -1.8
TRAV15-201ENST00000556680 DNASE1L2Q92874 299 aa3.8□□□□□ -1.8
TRAV15-201ENST00000556680 LRRC45Q96CN5 670 aa3.8□□□□□ -1.8
TRAV15-201ENST00000556680 SNF8Q96H20 258 aa3.8□□□□□ -1.8
TRAV15-201ENST00000556680 SERPINB11Q96P15 392 aa3.8□□□□□ -1.8
TRAV15-201ENST00000556680 RNF157Q96PX1 679 aa3.8□□□□□ -1.8
TRAV15-201ENST00000556680 FMO2Q99518 471 aa3.8□□□□□ -1.8
TRAV15-201ENST00000556680 GPATCH1Q9BRR8 931 aaKnown RBP3.8□□□□□ -1.8
TRAV15-201ENST00000556680 ERP44Q9BS26 406 aa3.8□□□□□ -1.8
TRAV15-201ENST00000556680 ZNF670Q9BS34 389 aa3.8□□□□□ -1.8
TRAV15-201ENST00000556680 TMEM121Q9BTD3 319 aa3.8□□□□□ -1.8
TRAV15-201ENST00000556680 LAT2Q9GZY6 243 aa3.8□□□□□ -1.8
TRAV15-201ENST00000556680 RSPH9Q9H1X1 276 aaPredicted RBP3.8□□□□□ -1.8
TRAV15-201ENST00000556680 MMADHCQ9H3L0 296 aaPredicted RBP3.8□□□□□ -1.8
TRAV15-201ENST00000556680 CENPHQ9H3R5 247 aa3.8□□□□□ -1.8
TRAV15-201ENST00000556680 C10orf88Q9H8K7 445 aa3.8□□□□□ -1.8
TRAV15-201ENST00000556680 ZNF556Q9HAH1 456 aa3.8□□□□□ -1.8
TRAV15-201ENST00000556680 SDR39U1Q9NRG7 319 aaPredicted RBP3.8□□□□□ -1.8
TRAV15-201ENST00000556680 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP3.8□□□□□ -1.8
TRAV15-201ENST00000556680 FGF21Q9NSA1 209 aa3.8□□□□□ -1.8
TRAV15-201ENST00000556680 DNAJC17Q9NVM6 304 aaKnown RBP3.8□□□□□ -1.8
TRAV15-201ENST00000556680 VPS18Q9P253 973 aa3.8□□□□□ -1.8
TRAV15-201ENST00000556680 PCYOX1Q9UHG3 505 aa3.8□□□□□ -1.8
TRAV15-201ENST00000556680 ACAD8Q9UKU7 415 aa3.8□□□□□ -1.8
TRAV15-201ENST00000556680 DNPEPQ9ULA0 475 aa3.8□□□□□ -1.8
TRAV15-201ENST00000556680 SCML2Q9UQR0 700 aa3.8□□□□□ -1.8
TRAV15-201ENST00000556680 PIKFYVEQ9Y2I7 2098 aa3.8□□□□□ -1.8
TRAV15-201ENST00000556680 PCNTO95613 3336 aa3.8□□□□□ -1.8
TRAV15-201ENST00000556680 TCF20Q9UGU0 1960 aaKnown RBP3.8□□□□□ -1.8
TRAV15-201ENST00000556680 DOCK7Q96N67 2140 aa3.79□□□□□ -1.8
TRAV15-201ENST00000556680 DOCK8Q8NF50 2099 aa3.79□□□□□ -1.8
TRAV15-201ENST00000556680 IGLV9-49A0A0B4J1Y8 123 aa3.79□□□□□ -1.8
TRAV15-201ENST00000556680 A0A0U1RQK1 487 aa3.79□□□□□ -1.8
TRAV15-201ENST00000556680 ZNF320A2RRD8 509 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms