RNA–Protein interactions for RNA: ENST00000556399.5

ARHGEF40-207, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 4,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-207ENST00000556399 LHCGRP22888 699 aa14.26□□□□□ -0.13
ARHGEF40-207ENST00000556399 DNASE1L1P49184 302 aa14.26□□□□□ -0.13
ARHGEF40-207ENST00000556399 MAN2A2P49641 1150 aa14.26□□□□□ -0.13
ARHGEF40-207ENST00000556399 CAV3P56539 151 aa14.26□□□□□ -0.13
ARHGEF40-207ENST00000556399 ELOAQ14241 798 aaKnown RBP14.26□□□□□ -0.13
ARHGEF40-207ENST00000556399 FAM180AQ6UWF9 173 aa14.26□□□□□ -0.13
ARHGEF40-207ENST00000556399 UBE2Q1Q7Z7E8 422 aa14.26□□□□□ -0.13
ARHGEF40-207ENST00000556399 PUM2Q8TB72 1066 aaKnown RBP eCLIP14.26□□□□□ -0.13
ARHGEF40-207ENST00000556399 MCCC1Q96RQ3 725 aaPredicted RBP14.26□□□□□ -0.13
ARHGEF40-207ENST00000556399 CTRCQ99895 268 aa14.26□□□□□ -0.13
ARHGEF40-207ENST00000556399 SCN9AQ15858 1988 aa14.26□□□□□ -0.13
ARHGEF40-207ENST00000556399 OR7A10O76100 309 aa14.25□□□□□ -0.13
ARHGEF40-207ENST00000556399 KLKB1P03952 638 aa14.25□□□□□ -0.13
ARHGEF40-207ENST00000556399 RNF144AP50876 292 aaPredicted RBP14.25□□□□□ -0.13
ARHGEF40-207ENST00000556399 CTSCP53634 463 aa14.25□□□□□ -0.13
ARHGEF40-207ENST00000556399 COX20Q5RI15 118 aa14.25□□□□□ -0.13
ARHGEF40-207ENST00000556399 OR4C11Q6IEV9 310 aa14.25□□□□□ -0.13
ARHGEF40-207ENST00000556399 PODNL1Q6PEZ8 512 aa14.25□□□□□ -0.13
ARHGEF40-207ENST00000556399 GDPD3Q7L5L3 318 aa14.25□□□□□ -0.13
ARHGEF40-207ENST00000556399 OR5D16Q8NGK9 328 aa14.25□□□□□ -0.13
ARHGEF40-207ENST00000556399 ADAMTS19Q8TE59 1207 aa14.25□□□□□ -0.13
ARHGEF40-207ENST00000556399 ACTR6Q9GZN1 396 aa14.25□□□□□ -0.13
ARHGEF40-207ENST00000556399 THSD1Q9NS62 852 aa14.25□□□□□ -0.13
ARHGEF40-207ENST00000556399 NUDT15Q9NV35 164 aa14.25□□□□□ -0.13
ARHGEF40-207ENST00000556399 ADAM8P78325 824 aa14.25□□□□□ -0.13
ARHGEF40-207ENST00000556399 PYCR3Q53H96 274 aa14.25□□□□□ -0.13
ARHGEF40-207ENST00000556399 COQ8AQ8NI60 647 aa14.25□□□□□ -0.13
ARHGEF40-207ENST00000556399 ADAD1Q96M93 576 aaKnown RBP14.25□□□□□ -0.13
ARHGEF40-207ENST00000556399 RC3H2Q9HBD1 1191 aaKnown RBP14.25□□□□□ -0.13
ARHGEF40-207ENST00000556399 OSGIN1Q9UJX0 560 aa14.25□□□□□ -0.13
ARHGEF40-207ENST00000556399 A0A1B0GVT2 93 aa14.25□□□□□ -0.13
ARHGEF40-207ENST00000556399 ID2Q02363 134 aa14.25□□□□□ -0.13
ARHGEF40-207ENST00000556399 HSD17B12Q53GQ0 312 aa14.25□□□□□ -0.13
ARHGEF40-207ENST00000556399 GET4Q7L5D6 327 aaPredicted RBP14.25□□□□□ -0.13
ARHGEF40-207ENST00000556399 TMEM25Q86YD3 366 aa14.25□□□□□ -0.13
ARHGEF40-207ENST00000556399 FCAMRQ8WWV6 532 aa14.25□□□□□ -0.13
ARHGEF40-207ENST00000556399 LRIG1Q96JA1 1093 aa14.25□□□□□ -0.13
ARHGEF40-207ENST00000556399 VNN3Q9NY84 501 aa14.25□□□□□ -0.13
ARHGEF40-207ENST00000556399 MRPL15Q9P015 296 aaKnown RBP14.25□□□□□ -0.13
ARHGEF40-207ENST00000556399 ASB4Q9Y574 426 aa14.25□□□□□ -0.13
ARHGEF40-207ENST00000556399 A0A0G2JPF8 293 aa14.25□□□□□ -0.13
ARHGEF40-207ENST00000556399 HNRNPCL3B7ZW38 293 aa14.25□□□□□ -0.13
ARHGEF40-207ENST00000556399 FAM227AF5H4B4 570 aa14.25□□□□□ -0.13
ARHGEF40-207ENST00000556399 HNRNPCL4P0DMR1 293 aa14.25□□□□□ -0.13
ARHGEF40-207ENST00000556399 SLC8B1Q6J4K2 584 aa14.25□□□□□ -0.13
ARHGEF40-207ENST00000556399 RFLNAQ6ZTI6 216 aa14.25□□□□□ -0.13
ARHGEF40-207ENST00000556399 SAP130Q9H0E3 1048 aa14.25□□□□□ -0.13
ARHGEF40-207ENST00000556399 CARS2Q9HA77 564 aaKnown RBP14.25□□□□□ -0.13
ARHGEF40-207ENST00000556399 PRRC2BQ5JSZ5 2229 aaKnown RBP14.24□□□□□ -0.13
ARHGEF40-207ENST00000556399 SLC22A31A6NKX4 558 aa14.24□□□□□ -0.13
ARHGEF40-207ENST00000556399 H0YIV9 168 aa14.24□□□□□ -0.13
ARHGEF40-207ENST00000556399 RFPL3O75679 317 aa14.24□□□□□ -0.13
ARHGEF40-207ENST00000556399 CD2P06729 351 aa14.24□□□□□ -0.13
ARHGEF40-207ENST00000556399 SLC10A3P09131 477 aa14.24□□□□□ -0.13
ARHGEF40-207ENST00000556399 PITPNBP48739 271 aa14.24□□□□□ -0.13
ARHGEF40-207ENST00000556399 ZNF234Q14588 700 aa14.24□□□□□ -0.13
ARHGEF40-207ENST00000556399 NDUFAF5Q5TEU4 345 aa14.24□□□□□ -0.13
ARHGEF40-207ENST00000556399 PGBD2Q6P3X8 592 aa14.24□□□□□ -0.13
ARHGEF40-207ENST00000556399 HORMAD2Q8N7B1 307 aa14.24□□□□□ -0.13
ARHGEF40-207ENST00000556399 ZNF480Q8WV37 535 aa14.24□□□□□ -0.13
ARHGEF40-207ENST00000556399 CCDC107Q8WV48 283 aa14.24□□□□□ -0.13
ARHGEF40-207ENST00000556399 NKD1Q969G9 470 aa14.24□□□□□ -0.13
ARHGEF40-207ENST00000556399 ARHGAP39Q9C0H5 1083 aa14.24□□□□□ -0.13
ARHGEF40-207ENST00000556399 CD93Q9NPY3 652 aa14.24□□□□□ -0.13
ARHGEF40-207ENST00000556399 COQ3Q9NZJ6 369 aa14.24□□□□□ -0.13
ARHGEF40-207ENST00000556399 H3BSH0 61 aa14.24□□□□□ -0.13
ARHGEF40-207ENST00000556399 ADAM12O43184 909 aa14.24□□□□□ -0.13
ARHGEF40-207ENST00000556399 EPHA2P29317 976 aa14.24□□□□□ -0.13
ARHGEF40-207ENST00000556399 PDHA2P29803 388 aa14.24□□□□□ -0.13
ARHGEF40-207ENST00000556399 CDC20Q12834 499 aa14.24□□□□□ -0.13
ARHGEF40-207ENST00000556399 CDK10Q15131 360 aa14.24□□□□□ -0.13
ARHGEF40-207ENST00000556399 SEC23BQ15437 767 aa14.24□□□□□ -0.13
ARHGEF40-207ENST00000556399 VRK3Q8IV63 474 aa14.24□□□□□ -0.13
ARHGEF40-207ENST00000556399 CPOQ8IVL8 374 aa14.24□□□□□ -0.13
ARHGEF40-207ENST00000556399 SLAIN1Q8ND83 568 aa14.24□□□□□ -0.13
ARHGEF40-207ENST00000556399 OR4E2Q8NGC2 313 aa14.24□□□□□ -0.13
ARHGEF40-207ENST00000556399 OR8K5Q8NH50 307 aa14.24□□□□□ -0.13
ARHGEF40-207ENST00000556399 TRMT10AQ8TBZ6 339 aaKnown RBP14.24□□□□□ -0.13
ARHGEF40-207ENST00000556399 CSF3RQ99062 836 aa14.24□□□□□ -0.13
ARHGEF40-207ENST00000556399 PSD2Q9BQI7 771 aa14.24□□□□□ -0.13
ARHGEF40-207ENST00000556399 PDFQ9HBH1 243 aa14.24□□□□□ -0.13
ARHGEF40-207ENST00000556399 LYARQ9NX58 379 aaKnown RBP14.24□□□□□ -0.13
ARHGEF40-207ENST00000556399 CSNK1G3Q9Y6M4 447 aa14.24□□□□□ -0.13
ARHGEF40-207ENST00000556399 KANTRA0A1W2PQU2 76 aa14.24□□□□□ -0.13
ARHGEF40-207ENST00000556399 C1orf226A1L170 272 aa14.24□□□□□ -0.13
ARHGEF40-207ENST00000556399 ELOA3DA6NLF2 546 aaPredicted RBP14.24□□□□□ -0.13
ARHGEF40-207ENST00000556399 FRS3O43559 492 aa14.24□□□□□ -0.13
ARHGEF40-207ENST00000556399 DRD5P21918 477 aa14.24□□□□□ -0.13
ARHGEF40-207ENST00000556399 CSNK1DP48730 415 aa14.24□□□□□ -0.13
ARHGEF40-207ENST00000556399 MASP1P48740 699 aa14.24□□□□□ -0.13
ARHGEF40-207ENST00000556399 ELOA3BQ3SY89 546 aa14.24□□□□□ -0.13
ARHGEF40-207ENST00000556399 GARNL3Q5VVW2 1013 aa14.24□□□□□ -0.13
ARHGEF40-207ENST00000556399 ZNF627Q7L945 461 aa14.24□□□□□ -0.13
ARHGEF40-207ENST00000556399 NRROSQ86YC3 692 aa14.24□□□□□ -0.13
ARHGEF40-207ENST00000556399 ELOA3Q8NG57 546 aa14.24□□□□□ -0.13
ARHGEF40-207ENST00000556399 OR7G1Q8NGA0 311 aa14.24□□□□□ -0.13
ARHGEF40-207ENST00000556399 SPRYD4Q8WW59 207 aaPredicted RBP14.24□□□□□ -0.13
ARHGEF40-207ENST00000556399 SLC22A18Q96BI1 424 aa14.24□□□□□ -0.13
ARHGEF40-207ENST00000556399 DPH7Q9BTV6 452 aa14.24□□□□□ -0.13
ARHGEF40-207ENST00000556399 RLIMQ9NVW2 624 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms