RNA–Protein interactions for RNA: ENST00000556310.1

SLIRP-205, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-205ENST00000556310 BCAP29Q9UHQ4 241 aa10.63□□□□□ -0.71
SLIRP-205ENST00000556310 DTX4Q9Y2E6 619 aa10.63□□□□□ -0.71
SLIRP-205ENST00000556310 ZNF407Q9C0G0 2248 aa10.63□□□□□ -0.71
SLIRP-205ENST00000556310 DNAJC13O75165 2243 aa10.62□□□□□ -0.71
SLIRP-205ENST00000556310 PINLYPA6NC86 204 aa10.62□□□□□ -0.71
SLIRP-205ENST00000556310 WIPF3A6NGB9 483 aa10.62□□□□□ -0.71
SLIRP-205ENST00000556310 MYO1GB0I1T2 1018 aa10.62□□□□□ -0.71
SLIRP-205ENST00000556310 TMEM114B3SHH9 223 aa10.62□□□□□ -0.71
SLIRP-205ENST00000556310 G3V3Y1 287 aa10.62□□□□□ -0.71
SLIRP-205ENST00000556310 ACOX3O15254 700 aa10.62□□□□□ -0.71
SLIRP-205ENST00000556310 LRRTM2O43300 516 aa10.62□□□□□ -0.71
SLIRP-205ENST00000556310 BCAS2O75934 225 aaPredicted RBP10.62□□□□□ -0.71
SLIRP-205ENST00000556310 GLSO94925 669 aaPredicted RBP10.62□□□□□ -0.71
SLIRP-205ENST00000556310 SLITRK5O94991 958 aa10.62□□□□□ -0.71
SLIRP-205ENST00000556310 SDC1P18827 310 aa10.62□□□□□ -0.71
SLIRP-205ENST00000556310 CNR1P21554 472 aa10.62□□□□□ -0.71
SLIRP-205ENST00000556310 TACR1P25103 407 aa10.62□□□□□ -0.71
SLIRP-205ENST00000556310 NTSP30990 170 aa10.62□□□□□ -0.71
SLIRP-205ENST00000556310 MPIP34949 423 aa10.62□□□□□ -0.71
SLIRP-205ENST00000556310 CA7P43166 264 aa10.62□□□□□ -0.71
SLIRP-205ENST00000556310 DCAF7P61962 342 aa10.62□□□□□ -0.71
SLIRP-205ENST00000556310 PLGLB1Q02325 96 aa10.62□□□□□ -0.71
SLIRP-205ENST00000556310 CHI3L2Q15782 390 aa10.62□□□□□ -0.71
SLIRP-205ENST00000556310 GALNTL6Q49A17 601 aa10.62□□□□□ -0.71
SLIRP-205ENST00000556310 TRMT12Q53H54 448 aaKnown RBP10.62□□□□□ -0.71
SLIRP-205ENST00000556310 CMPK2Q5EBM0 449 aa10.62□□□□□ -0.71
SLIRP-205ENST00000556310 C1QL3Q5VWW1 255 aa10.62□□□□□ -0.71
SLIRP-205ENST00000556310 SLC22A10Q63ZE4 541 aa10.62□□□□□ -0.71
SLIRP-205ENST00000556310 Q6ZPB1 254 aaPredicted RBP10.62□□□□□ -0.71
SLIRP-205ENST00000556310 RGS9BPQ6ZS82 235 aa10.62□□□□□ -0.71
SLIRP-205ENST00000556310 FAM47EQ6ZV65 393 aa10.62□□□□□ -0.71
SLIRP-205ENST00000556310 SIMC1Q8NDZ2 872 aa10.62□□□□□ -0.71
SLIRP-205ENST00000556310 FAM13CQ8NE31 585 aa10.62□□□□□ -0.71
SLIRP-205ENST00000556310 OR10G3Q8NGC4 313 aa10.62□□□□□ -0.71
SLIRP-205ENST00000556310 OR52R1Q8NGF1 315 aa10.62□□□□□ -0.71
SLIRP-205ENST00000556310 RELTQ969Z4 430 aa10.62□□□□□ -0.71
SLIRP-205ENST00000556310 PPP3R2Q96LZ3 170 aa10.62□□□□□ -0.71
SLIRP-205ENST00000556310 BBS4Q96RK4 519 aa10.62□□□□□ -0.71
SLIRP-205ENST00000556310 ITPAQ9BY32 194 aa10.62□□□□□ -0.71
SLIRP-205ENST00000556310 TTTY12Q9BZ98 90 aa10.62□□□□□ -0.71
SLIRP-205ENST00000556310 NXF5Q9H1B4 397 aaKnown RBP10.62□□□□□ -0.71
SLIRP-205ENST00000556310 CNIH4Q9P003 139 aa10.62□□□□□ -0.71
SLIRP-205ENST00000556310 ZDHHC2Q9UIJ5 367 aa10.62□□□□□ -0.71
SLIRP-205ENST00000556310 EXO1Q9UQ84 846 aaKnown RBP10.62□□□□□ -0.71
SLIRP-205ENST00000556310 ZNF835Q9Y2P0 537 aa10.62□□□□□ -0.71
SLIRP-205ENST00000556310 NPFFR2Q9Y5X5 522 aa10.62□□□□□ -0.71
SLIRP-205ENST00000556310 CHCHD2Q9Y6H1 151 aaPredicted RBP10.62□□□□□ -0.71
SLIRP-205ENST00000556310 MYO7BQ6PIF6 2116 aa10.61□□□□□ -0.71
SLIRP-205ENST00000556310 NINQ8N4C6 2090 aa10.61□□□□□ -0.71
SLIRP-205ENST00000556310 TRGV8A0A0C4DH27 118 aa10.61□□□□□ -0.71
SLIRP-205ENST00000556310 WDR91A4D1P6 747 aa10.61□□□□□ -0.71
SLIRP-205ENST00000556310 TP53I11O14683 189 aa10.61□□□□□ -0.71
SLIRP-205ENST00000556310 HS6ST1O60243 411 aa10.61□□□□□ -0.71
SLIRP-205ENST00000556310 PLOD3O60568 738 aa10.61□□□□□ -0.71
SLIRP-205ENST00000556310 TBX19O60806 448 aa10.61□□□□□ -0.71
SLIRP-205ENST00000556310 SKAP2O75563 359 aaPredicted RBP10.61□□□□□ -0.71
SLIRP-205ENST00000556310 SNUPNO95149 360 aaKnown RBP10.61□□□□□ -0.71
SLIRP-205ENST00000556310 HSPA4LO95757 839 aa10.61□□□□□ -0.71
SLIRP-205ENST00000556310 GRK2P25098 689 aa10.61□□□□□ -0.71
SLIRP-205ENST00000556310 ABCD3P28288 659 aa10.61□□□□□ -0.71
SLIRP-205ENST00000556310 MAPK1P28482 360 aa10.61□□□□□ -0.71
SLIRP-205ENST00000556310 PIGAP37287 484 aa10.61□□□□□ -0.71
SLIRP-205ENST00000556310 ASMTP46597 345 aa10.61□□□□□ -0.71
SLIRP-205ENST00000556310 DNASE1L1P49184 302 aa10.61□□□□□ -0.71
SLIRP-205ENST00000556310 EMDP50402 254 aa10.61□□□□□ -0.71
SLIRP-205ENST00000556310 NCBP2P52298 156 aaKnown RBP eCLIP10.61□□□□□ -0.712e-16■■■□□ 16.6
SLIRP-205ENST00000556310 CASP6P55212 293 aa10.61□□□□□ -0.71
SLIRP-205ENST00000556310 PPIAP62937 165 aaKnown RBP10.61□□□□□ -0.71
SLIRP-205ENST00000556310 HSF1Q00613 529 aa10.61□□□□□ -0.71
SLIRP-205ENST00000556310 FOXO1Q12778 655 aa10.61□□□□□ -0.71
SLIRP-205ENST00000556310 MPP2Q14168 576 aa10.61□□□□□ -0.71
SLIRP-205ENST00000556310 NNATQ16517 81 aa10.61□□□□□ -0.71
SLIRP-205ENST00000556310 HYAL4Q2M3T9 481 aa10.61□□□□□ -0.71
SLIRP-205ENST00000556310 RFTN2Q52LD8 501 aaPredicted RBP10.61□□□□□ -0.71
SLIRP-205ENST00000556310 TBCELQ5QJ74 424 aa10.61□□□□□ -0.71
SLIRP-205ENST00000556310 PRAMEF20Q5VT98 475 aa10.61□□□□□ -0.71
SLIRP-205ENST00000556310 CES4AQ5XG92 561 aa10.61□□□□□ -0.71
SLIRP-205ENST00000556310 TMEM64Q6YI46 380 aa10.61□□□□□ -0.71
SLIRP-205ENST00000556310 FJX1Q86VR8 437 aa10.61□□□□□ -0.71
SLIRP-205ENST00000556310 SLC22A16Q86VW1 577 aa10.61□□□□□ -0.71
SLIRP-205ENST00000556310 CHERPQ8IWX8 916 aaKnown RBP10.61□□□□□ -0.71
SLIRP-205ENST00000556310 KAT2AQ92830 837 aa10.61□□□□□ -0.71
SLIRP-205ENST00000556310 ZBTB9Q96C00 473 aa10.61□□□□□ -0.71
SLIRP-205ENST00000556310 HSPBAP1Q96EW2 488 aa10.61□□□□□ -0.71
SLIRP-205ENST00000556310 LCORQ96JN0 433 aaPredicted RBP10.61□□□□□ -0.71
SLIRP-205ENST00000556310 EGLN2Q96KS0 407 aa10.61□□□□□ -0.71
SLIRP-205ENST00000556310 TSSK3Q96PN8 268 aa10.61□□□□□ -0.71
SLIRP-205ENST00000556310 BTBD9Q96Q07 612 aa10.61□□□□□ -0.71
SLIRP-205ENST00000556310 SECISBP2Q96T21 854 aaKnown RBP10.61□□□□□ -0.71
SLIRP-205ENST00000556310 ZDHHC11Q9H8X9 412 aa10.61□□□□□ -0.71
SLIRP-205ENST00000556310 IL1RL2Q9HB29 575 aa10.61□□□□□ -0.71
SLIRP-205ENST00000556310 KCNK9Q9NPC2 374 aa10.61□□□□□ -0.71
SLIRP-205ENST00000556310 TUBA8Q9NY65 449 aaPredicted RBP10.61□□□□□ -0.71
SLIRP-205ENST00000556310 CNOT11Q9UKZ1 510 aaKnown RBP10.61□□□□□ -0.71
SLIRP-205ENST00000556310 NCKAP5O14513 1909 aa10.6□□□□□ -0.71
SLIRP-205ENST00000556310 PCNX1Q96RV3 2341 aa10.6□□□□□ -0.71
SLIRP-205ENST00000556310 A0A087WV62 115 aa10.6□□□□□ -0.71
SLIRP-205ENST00000556310 ANKRD33BA6NCL7 494 aa10.6□□□□□ -0.71
SLIRP-205ENST00000556310 FRG2CA6NGY1 282 aa10.6□□□□□ -0.71
SLIRP-205ENST00000556310 FAM166BA8MTA8 275 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms