RNA–Protein interactions for RNA: ENST00000555402.1

VRK1-205, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 415 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-205ENST00000555402 MOCOSQ96EN8 888 aa4.39□□□□□ -1.71
VRK1-205ENST00000555402 CPXM1Q96SM3 734 aa4.39□□□□□ -1.71
VRK1-205ENST00000555402 HSD17B14Q9BPX1 270 aa4.39□□□□□ -1.71
VRK1-205ENST00000555402 LRRC61Q9BV99 259 aa4.39□□□□□ -1.71
VRK1-205ENST00000555402 CARD6Q9BX69 1037 aa4.39□□□□□ -1.71
VRK1-205ENST00000555402 RNF41Q9H4P4 317 aaPredicted RBP4.39□□□□□ -1.71
VRK1-205ENST00000555402 ALG9Q9H6U8 611 aa4.39□□□□□ -1.71
VRK1-205ENST00000555402 SLC35D1Q9NTN3 355 aa4.39□□□□□ -1.71
VRK1-205ENST00000555402 RARRES3Q9UL19 164 aa4.39□□□□□ -1.71
VRK1-205ENST00000555402 ZNF346Q9UL40 294 aaKnown RBP4.39□□□□□ -1.71
VRK1-205ENST00000555402 KLF2Q9Y5W3 355 aaPredicted RBP4.39□□□□□ -1.71
VRK1-205ENST00000555402 SYNJ2O15056 1496 aa4.38□□□□□ -1.71
VRK1-205ENST00000555402 A0A0A6YYD4 124 aa4.38□□□□□ -1.71
VRK1-205ENST00000555402 K7EQG2 157 aa4.38□□□□□ -1.71
VRK1-205ENST00000555402 RANBP6O60518 1105 aaKnown RBP4.38□□□□□ -1.71
VRK1-205ENST00000555402 ECDO95905 644 aaPredicted RBP4.38□□□□□ -1.71
VRK1-205ENST00000555402 FCGR3AP08637 254 aa4.38□□□□□ -1.71
VRK1-205ENST00000555402 SLC35G4P0C7Q5 338 aa4.38□□□□□ -1.71
VRK1-205ENST00000555402 ZNF883P0CG24 379 aa4.38□□□□□ -1.71
VRK1-205ENST00000555402 CALCBP10092 127 aa4.38□□□□□ -1.71
VRK1-205ENST00000555402 FOSL2P15408 326 aa4.38□□□□□ -1.71
VRK1-205ENST00000555402 TNNI3P19429 210 aa4.38□□□□□ -1.71
VRK1-205ENST00000555402 SPRP35270 261 aaPredicted RBP4.38□□□□□ -1.71
VRK1-205ENST00000555402 SLC1A4P43007 532 aa4.38□□□□□ -1.71
VRK1-205ENST00000555402 HSD17B7P56937 341 aa4.38□□□□□ -1.71
VRK1-205ENST00000555402 ELAVL2Q12926 359 aaKnown RBP4.38□□□□□ -1.71
VRK1-205ENST00000555402 LY6DQ14210 128 aa4.38□□□□□ -1.71
VRK1-205ENST00000555402 ZSWIM7Q19AV6 140 aa4.38□□□□□ -1.71
VRK1-205ENST00000555402 ZNF699Q32M78 642 aa4.38□□□□□ -1.71
VRK1-205ENST00000555402 ADPRMQ3LIE5 342 aa4.38□□□□□ -1.71
VRK1-205ENST00000555402 LRIT3Q3SXY7 679 aa4.38□□□□□ -1.71
VRK1-205ENST00000555402 POM121L1PQ3SYA9 428 aa4.38□□□□□ -1.71
VRK1-205ENST00000555402 ACSF3Q4G176 576 aaPredicted RBP4.38□□□□□ -1.71
VRK1-205ENST00000555402 BEND6Q5SZJ8 279 aaPredicted RBP4.38□□□□□ -1.71
VRK1-205ENST00000555402 ZNF613Q6PF04 617 aa4.38□□□□□ -1.71
VRK1-205ENST00000555402 DOK6Q6PKX4 331 aa4.38□□□□□ -1.71
VRK1-205ENST00000555402 RPAINQ86UA6 219 aa4.38□□□□□ -1.71
VRK1-205ENST00000555402 KRTAP7-1Q8IUC3 87 aa4.38□□□□□ -1.71
VRK1-205ENST00000555402 LMNTD2Q8IXW0 634 aa4.38□□□□□ -1.71
VRK1-205ENST00000555402 MIPOL1Q8TD10 442 aa4.38□□□□□ -1.71
VRK1-205ENST00000555402 ZNF597Q96LX8 424 aa4.38□□□□□ -1.71
VRK1-205ENST00000555402 TSGA13Q96PP4 275 aa4.38□□□□□ -1.71
VRK1-205ENST00000555402 ATF6BQ99941 703 aa4.38□□□□□ -1.71
VRK1-205ENST00000555402 OCR1Q9BZK8 76 aa4.38□□□□□ -1.71
VRK1-205ENST00000555402 LRRCC1Q9C099 1032 aa4.38□□□□□ -1.71
VRK1-205ENST00000555402 ATP6V1HQ9UI12 483 aa4.38□□□□□ -1.71
VRK1-205ENST00000555402 EMCNQ9ULC0 261 aa4.38□□□□□ -1.71
VRK1-205ENST00000555402 CPQQ9Y646 472 aa4.38□□□□□ -1.71
VRK1-205ENST00000555402 SALL1Q9NSC2 1324 aa4.38□□□□□ -1.71
VRK1-205ENST00000555402 A0A0U1RQV5 110 aa4.37□□□□□ -1.71
VRK1-205ENST00000555402 BCLAF3A2AJT9 711 aaKnown RBP4.37□□□□□ -1.71
VRK1-205ENST00000555402 CPLX1O14810 134 aa4.37□□□□□ -1.71
VRK1-205ENST00000555402 CHADO15335 359 aa4.37□□□□□ -1.71
VRK1-205ENST00000555402 DCXO43602 365 aa4.37□□□□□ -1.71
VRK1-205ENST00000555402 FRAT2O75474 233 aaPredicted RBP4.37□□□□□ -1.71
VRK1-205ENST00000555402 NDUFA7O95182 113 aa4.37□□□□□ -1.71
VRK1-205ENST00000555402 APBB3O95704 486 aa4.37□□□□□ -1.71
VRK1-205ENST00000555402 OAS1P00973 400 aaKnown RBP4.37□□□□□ -1.71
VRK1-205ENST00000555402 ANXA4P09525 319 aaPredicted RBP4.37□□□□□ -1.71
VRK1-205ENST00000555402 GSTT2P0CG29 244 aa4.37□□□□□ -1.71
VRK1-205ENST00000555402 GSTT2BP0CG30 244 aa4.37□□□□□ -1.71
VRK1-205ENST00000555402 TSPY4P0CV99 314 aa4.37□□□□□ -1.71
VRK1-205ENST00000555402 TSPY10P0CW01 314 aa4.37□□□□□ -1.71
VRK1-205ENST00000555402 UCP1P25874 307 aa4.37□□□□□ -1.71
VRK1-205ENST00000555402 RFC2P35250 354 aa4.37□□□□□ -1.71
VRK1-205ENST00000555402 ACAA2P42765 397 aaKnown RBP4.37□□□□□ -1.71
VRK1-205ENST00000555402 NAAAQ02083 359 aa4.37□□□□□ -1.71
VRK1-205ENST00000555402 RAPSNQ13702 412 aa4.37□□□□□ -1.71
VRK1-205ENST00000555402 SIX1Q15475 284 aaPredicted RBP4.37□□□□□ -1.71
VRK1-205ENST00000555402 WDR25Q64LD2 544 aaPredicted RBP4.37□□□□□ -1.71
VRK1-205ENST00000555402 APOOLQ6UXV4 268 aa4.37□□□□□ -1.71
VRK1-205ENST00000555402 MOB2Q70IA6 237 aa4.37□□□□□ -1.71
VRK1-205ENST00000555402 ZNF573Q86YE8 665 aa4.37□□□□□ -1.71
VRK1-205ENST00000555402 HSCBQ8IWL3 235 aa4.37□□□□□ -1.71
VRK1-205ENST00000555402 ARFGAP2Q8N6H7 521 aa4.37□□□□□ -1.71
VRK1-205ENST00000555402 PRSS33Q8NF86 280 aa4.37□□□□□ -1.71
VRK1-205ENST00000555402 OR4F17Q8NGA8 305 aa4.37□□□□□ -1.71
VRK1-205ENST00000555402 LHX4Q969G2 390 aa4.37□□□□□ -1.71
VRK1-205ENST00000555402 BIRC7Q96CA5 298 aa4.37□□□□□ -1.71
VRK1-205ENST00000555402 RAB3CQ96E17 227 aa4.37□□□□□ -1.71
VRK1-205ENST00000555402 OR4F4Q96R69 305 aa4.37□□□□□ -1.71
VRK1-205ENST00000555402 ZNF416Q9BWM5 594 aa4.37□□□□□ -1.71
VRK1-205ENST00000555402 GPR174Q9BXC1 333 aa4.37□□□□□ -1.71
VRK1-205ENST00000555402 RPAP3Q9H6T3 665 aaPredicted RBP4.37□□□□□ -1.71
VRK1-205ENST00000555402 KAT8Q9H7Z6 458 aaKnown RBP4.37□□□□□ -1.71
VRK1-205ENST00000555402 ADGRL4Q9HBW9 690 aa4.37□□□□□ -1.71
VRK1-205ENST00000555402 TMOD2Q9NZR1 351 aa4.37□□□□□ -1.71
VRK1-205ENST00000555402 CGNQ9P2M7 1197 aaKnown RBP4.37□□□□□ -1.71
VRK1-205ENST00000555402 FOXJ3Q9UPW0 622 aa4.37□□□□□ -1.71
VRK1-205ENST00000555402 MOB4Q9Y3A3 225 aa4.37□□□□□ -1.71
VRK1-205ENST00000555402 ATP6V0A2Q9Y487 856 aa4.37□□□□□ -1.71
VRK1-205ENST00000555402 NPIPA5A0A0B4J1W7 369 aa4.36□□□□□ -1.71
VRK1-205ENST00000555402 NPIPA5E9PKD4 350 aa4.36□□□□□ -1.71
VRK1-205ENST00000555402 E9PMD0 336 aa4.36□□□□□ -1.71
VRK1-205ENST00000555402 H3BTX0 84 aa4.36□□□□□ -1.71
VRK1-205ENST00000555402 SGK494L7N484 410 aa4.36□□□□□ -1.71
VRK1-205ENST00000555402 PDE5AO76074 875 aa4.36□□□□□ -1.71
VRK1-205ENST00000555402 IGHG1P01857 330 aa4.36□□□□□ -1.71
VRK1-205ENST00000555402 CCDC159P0C7I6 412 aa4.36□□□□□ -1.71
VRK1-205ENST00000555402 SAA4P35542 130 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms