RNA–Protein interactions for RNA: ENST00000555002.5

SYNE2-216, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 11,532 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-216ENST00000555002 NPAS3Q8IXF0 933 aa6.58□□□□□ -1.36
SYNE2-216ENST00000555002 RBMXL3Q8N7X1 1067 aaKnown RBP6.58□□□□□ -1.36
SYNE2-216ENST00000555002 DBF4BQ8NFT6 615 aa6.58□□□□□ -1.36
SYNE2-216ENST00000555002 GPR88Q9GZN0 384 aa6.58□□□□□ -1.36
SYNE2-216ENST00000555002 NCOA3Q9Y6Q9 1424 aa6.58□□□□□ -1.36
SYNE2-216ENST00000555002 ONECUT3O60422 494 aaPredicted RBP6.58□□□□□ -1.36
SYNE2-216ENST00000555002 GPR37L1O60883 481 aa6.58□□□□□ -1.36
SYNE2-216ENST00000555002 CBSLP0DN79 551 aa6.58□□□□□ -1.36
SYNE2-216ENST00000555002 CBSP35520 551 aa6.58□□□□□ -1.36
SYNE2-216ENST00000555002 PTH2RP49190 550 aa6.58□□□□□ -1.36
SYNE2-216ENST00000555002 GRB7Q14451 532 aa6.58□□□□□ -1.36
SYNE2-216ENST00000555002 KIAA1614Q5VZ46 1190 aa6.58□□□□□ -1.36
SYNE2-216ENST00000555002 COMMD7Q86VX2 200 aa6.58□□□□□ -1.36
SYNE2-216ENST00000555002 METTL25Q8N6Q8 603 aa6.58□□□□□ -1.36
SYNE2-216ENST00000555002 TSGA13Q96PP4 275 aa6.58□□□□□ -1.36
SYNE2-216ENST00000555002 VSX1Q9NZR4 365 aaPredicted RBP6.58□□□□□ -1.36
SYNE2-216ENST00000555002 EXTL2Q9UBQ6 330 aa6.58□□□□□ -1.36
SYNE2-216ENST00000555002 KCTD3Q9Y597 815 aa6.58□□□□□ -1.36
SYNE2-216ENST00000555002 CRYZL1O95825 349 aa6.57□□□□□ -1.36
SYNE2-216ENST00000555002 DEFA4P12838 97 aa6.57□□□□□ -1.36
SYNE2-216ENST00000555002 MMP8P22894 467 aa6.57□□□□□ -1.36
SYNE2-216ENST00000555002 HOXA1P49639 335 aaPredicted RBP6.57□□□□□ -1.36
SYNE2-216ENST00000555002 ABHD15Q6UXT9 468 aa6.57□□□□□ -1.36
SYNE2-216ENST00000555002 PRICKLE2Q7Z3G6 844 aa6.57□□□□□ -1.36
SYNE2-216ENST00000555002 CMTM1Q8IZ96 169 aa6.57□□□□□ -1.36
SYNE2-216ENST00000555002 LINC00471Q8N535 108 aa6.57□□□□□ -1.36
SYNE2-216ENST00000555002 RSC1A1Q92681 617 aa6.57□□□□□ -1.36
SYNE2-216ENST00000555002 SLC41A3Q96GZ6 507 aa6.57□□□□□ -1.36
SYNE2-216ENST00000555002 PYURFQ96I23 114 aa6.57□□□□□ -1.36
SYNE2-216ENST00000555002 FBXL20Q96IG2 436 aa6.57□□□□□ -1.36
SYNE2-216ENST00000555002 FAM46AQ96IP4 442 aaKnown RBP6.57□□□□□ -1.36
SYNE2-216ENST00000555002 CASD1Q96PB1 797 aa6.57□□□□□ -1.36
SYNE2-216ENST00000555002 ZIM2Q9NZV7 527 aa6.57□□□□□ -1.36
SYNE2-216ENST00000555002 SLC23A2Q9UGH3 650 aa6.57□□□□□ -1.36
SYNE2-216ENST00000555002 RAB27BO00194 218 aa6.57□□□□□ -1.36
SYNE2-216ENST00000555002 SLC16A5O15375 505 aa6.57□□□□□ -1.36
SYNE2-216ENST00000555002 CCL14Q16627 93 aa6.57□□□□□ -1.36
SYNE2-216ENST00000555002 DEFB110Q30KQ9 67 aa6.57□□□□□ -1.36
SYNE2-216ENST00000555002 AGTRAPQ6RW13 159 aa6.57□□□□□ -1.36
SYNE2-216ENST00000555002 RPS27LQ71UM5 84 aaKnown RBP6.57□□□□□ -1.36
SYNE2-216ENST00000555002 FAM217AQ8IXS0 508 aa6.57□□□□□ -1.36
SYNE2-216ENST00000555002 WDR92Q96MX6 357 aa6.57□□□□□ -1.36
SYNE2-216ENST00000555002 ENKD1Q9H0I2 346 aa6.57□□□□□ -1.36
SYNE2-216ENST00000555002 RPS10P5Q9NQ39 176 aa6.57□□□□□ -1.36
SYNE2-216ENST00000555002 PLEKHJ1Q9NW61 149 aa6.57□□□□□ -1.36
SYNE2-216ENST00000555002 SPTBN1Q01082 2364 aaKnown RBP6.57□□□□□ -1.36
SYNE2-216ENST00000555002 ZNF891A8MT65 544 aaPredicted RBP6.57□□□□□ -1.36
SYNE2-216ENST00000555002 LEFTY1O75610 366 aa6.57□□□□□ -1.36
SYNE2-216ENST00000555002 DDCP20711 480 aa6.57□□□□□ -1.36
SYNE2-216ENST00000555002 GDF1P27539 372 aa6.57□□□□□ -1.36
SYNE2-216ENST00000555002 RFC2P35250 354 aa6.57□□□□□ -1.36
SYNE2-216ENST00000555002 ADGRD1Q6QNK2 874 aa6.57□□□□□ -1.36
SYNE2-216ENST00000555002 C7orf26Q96N11 449 aa6.57□□□□□ -1.36
SYNE2-216ENST00000555002 TMEM9Q9P0T7 183 aa6.57□□□□□ -1.36
SYNE2-216ENST00000555002 NPFFR2Q9Y5X5 522 aa6.57□□□□□ -1.36
SYNE2-216ENST00000555002 H2AFB2P0C5Z0 115 aa6.57□□□□□ -1.36
SYNE2-216ENST00000555002 ITGB5P18084 799 aa6.57□□□□□ -1.36
SYNE2-216ENST00000555002 PRKACGP22612 351 aa6.57□□□□□ -1.36
SYNE2-216ENST00000555002 CRYZQ08257 329 aaKnown RBP6.57□□□□□ -1.36
SYNE2-216ENST00000555002 CNKSR3Q6P9H4 555 aa6.57□□□□□ -1.36
SYNE2-216ENST00000555002 NUP43Q8NFH3 380 aa6.57□□□□□ -1.36
SYNE2-216ENST00000555002 DDX1Q92499 740 aaKnown RBP6.57□□□□□ -1.36
SYNE2-216ENST00000555002 DAZLQ92904 295 aaKnown RBP6.57□□□□□ -1.36
SYNE2-216ENST00000555002 HHIPQ96QV1 700 aa6.57□□□□□ -1.36
SYNE2-216ENST00000555002 TINAGL1Q9GZM7 467 aaPredicted RBP6.57□□□□□ -1.36
SYNE2-216ENST00000555002 PPA2Q9H2U2 334 aa6.57□□□□□ -1.36
SYNE2-216ENST00000555002 UNKLQ9H9P5 680 aaKnown RBP6.57□□□□□ -1.36
SYNE2-216ENST00000555002 C11orf97A0A1B0GVM6 126 aaPredicted RBP6.57□□□□□ -1.36
SYNE2-216ENST00000555002 IRAK2O43187 625 aa6.57□□□□□ -1.36
SYNE2-216ENST00000555002 DFNA5O60443 496 aa6.57□□□□□ -1.36
SYNE2-216ENST00000555002 SHMT2P34897 504 aa6.57□□□□□ -1.36
SYNE2-216ENST00000555002 AGTR2P50052 363 aa6.57□□□□□ -1.36
SYNE2-216ENST00000555002 ART1P52961 327 aa6.57□□□□□ -1.36
SYNE2-216ENST00000555002 RNF151Q2KHN1 245 aa6.57□□□□□ -1.36
SYNE2-216ENST00000555002 PRAMEF8Q5VWM4 474 aa6.57□□□□□ -1.36
SYNE2-216ENST00000555002 PRAMEF7Q5VXH5 474 aa6.57□□□□□ -1.36
SYNE2-216ENST00000555002 OR52E2Q8NGJ4 325 aa6.57□□□□□ -1.36
SYNE2-216ENST00000555002 TMEM74Q96NL1 305 aa6.57□□□□□ -1.36
SYNE2-216ENST00000555002 ZNF559Q9BR84 538 aa6.57□□□□□ -1.36
SYNE2-216ENST00000555002 TMEM184BQ9Y519 407 aaPredicted RBP6.57□□□□□ -1.36
SYNE2-216ENST00000555002 CD72P21854 359 aa6.57□□□□□ -1.36
SYNE2-216ENST00000555002 GNB1P62873 340 aa6.57□□□□□ -1.36
SYNE2-216ENST00000555002 MC2RQ01718 297 aa6.57□□□□□ -1.36
SYNE2-216ENST00000555002 PLA2G7Q13093 441 aa6.57□□□□□ -1.36
SYNE2-216ENST00000555002 OLIG2Q13516 323 aa6.57□□□□□ -1.36
SYNE2-216ENST00000555002 LY6G5CQ5SRR4 150 aa6.57□□□□□ -1.36
SYNE2-216ENST00000555002 CRELD2Q6UXH1 353 aaPredicted RBP6.57□□□□□ -1.36
SYNE2-216ENST00000555002 CLDN19Q8N6F1 224 aa6.57□□□□□ -1.36
SYNE2-216ENST00000555002 DCUN1D4Q92564 292 aa6.57□□□□□ -1.36
SYNE2-216ENST00000555002 OR10A5Q9H207 317 aa6.57□□□□□ -1.36
SYNE2-216ENST00000555002 OR10A2Q9H208 303 aa6.57□□□□□ -1.36
SYNE2-216ENST00000555002 TP63Q9H3D4 680 aaPredicted RBP6.57□□□□□ -1.36
SYNE2-216ENST00000555002 CD93Q9NPY3 652 aa6.57□□□□□ -1.36
SYNE2-216ENST00000555002 SLAMF7Q9NQ25 335 aa6.57□□□□□ -1.36
SYNE2-216ENST00000555002 ACSL5Q9ULC5 683 aa6.57□□□□□ -1.36
SYNE2-216ENST00000555002 GPR25O00155 361 aa6.57□□□□□ -1.36
SYNE2-216ENST00000555002 SC5DO75845 299 aa6.57□□□□□ -1.36
SYNE2-216ENST00000555002 SCO1O75880 301 aa6.57□□□□□ -1.36
SYNE2-216ENST00000555002 RDH10Q8IZV5 341 aa6.57□□□□□ -1.36
SYNE2-216ENST00000555002 Q8N402 240 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms