RNA–Protein interactions for RNA: ENST00000554943.5

PPP4R3A-206, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 5 BASIC

Gene PPP4R3A, Length 3,369 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-206ENST00000554943 IDH2P48735 452 aaKnown RBP11.84□□□□□ -0.51
PPP4R3A-206ENST00000554943 PSPHP78330 225 aa11.84□□□□□ -0.51
PPP4R3A-206ENST00000554943 ZNF155Q12901 538 aaPredicted RBP11.84□□□□□ -0.51
PPP4R3A-206ENST00000554943 DNASE1L3Q13609 305 aa11.84□□□□□ -0.51
PPP4R3A-206ENST00000554943 RPE65Q16518 533 aa11.84□□□□□ -0.51
PPP4R3A-206ENST00000554943 TSTQ16762 297 aaKnown RBP11.84□□□□□ -0.51
PPP4R3A-206ENST00000554943 RASSF6Q6ZTQ3 369 aa11.84□□□□□ -0.51
PPP4R3A-206ENST00000554943 ACOT4Q8N9L9 421 aa11.84□□□□□ -0.51
PPP4R3A-206ENST00000554943 TMEM163Q8TC26 289 aa11.84□□□□□ -0.51
PPP4R3A-206ENST00000554943 ELP4Q96EB1 424 aa11.84□□□□□ -0.51
PPP4R3A-206ENST00000554943 SLC35G5Q96KT7 338 aa11.84□□□□□ -0.51
PPP4R3A-206ENST00000554943 MIXL1Q9H2W2 232 aa11.84□□□□□ -0.51
PPP4R3A-206ENST00000554943 IL20Q9NYY1 176 aa11.84□□□□□ -0.51
PPP4R3A-206ENST00000554943 SEC14L4Q9UDX3 406 aa11.84□□□□□ -0.51
PPP4R3A-206ENST00000554943 UGT2B17O75795 530 aa11.84□□□□□ -0.51
PPP4R3A-206ENST00000554943 FAM157BP0CG42 384 aa11.84□□□□□ -0.51
PPP4R3A-206ENST00000554943 POU2F1P14859 743 aa11.84□□□□□ -0.51
PPP4R3A-206ENST00000554943 ETV5P41161 510 aa11.84□□□□□ -0.51
PPP4R3A-206ENST00000554943 RFX2P48378 723 aa11.84□□□□□ -0.51
PPP4R3A-206ENST00000554943 ETV1P50549 477 aa11.84□□□□□ -0.51
PPP4R3A-206ENST00000554943 XKP51811 444 aa11.84□□□□□ -0.51
PPP4R3A-206ENST00000554943 EEF1A1P68104 462 aaKnown RBP11.84□□□□□ -0.51
PPP4R3A-206ENST00000554943 MADCAM1Q13477 382 aa11.84□□□□□ -0.51
PPP4R3A-206ENST00000554943 FLCNQ8NFG4 579 aa11.84□□□□□ -0.51
PPP4R3A-206ENST00000554943 TM9SF4Q92544 642 aa11.84□□□□□ -0.51
PPP4R3A-206ENST00000554943 A0A087WUU8 490 aa11.83□□□□□ -0.52
PPP4R3A-206ENST00000554943 ACP2P11117 423 aa11.83□□□□□ -0.52
PPP4R3A-206ENST00000554943 TRHRP34981 398 aaPredicted RBP11.83□□□□□ -0.52
PPP4R3A-206ENST00000554943 RAB40BQ12829 278 aa11.83□□□□□ -0.52
PPP4R3A-206ENST00000554943 DECR1Q16698 335 aa11.83□□□□□ -0.52
PPP4R3A-206ENST00000554943 QSOX2Q6ZRP7 698 aa11.83□□□□□ -0.52
PPP4R3A-206ENST00000554943 STX19Q8N4C7 294 aa11.83□□□□□ -0.52
PPP4R3A-206ENST00000554943 OR56A1Q8NGH5 318 aa11.83□□□□□ -0.52
PPP4R3A-206ENST00000554943 SRRQ9GZT4 340 aa11.83□□□□□ -0.52
PPP4R3A-206ENST00000554943 WDR26Q9H7D7 661 aa11.83□□□□□ -0.52
PPP4R3A-206ENST00000554943 GPR27Q9NS67 375 aa11.83□□□□□ -0.52
PPP4R3A-206ENST00000554943 OR1A2Q9Y585 309 aa11.83□□□□□ -0.52
PPP4R3A-206ENST00000554943 A0A1W2PQF6 199 aa11.83□□□□□ -0.52
PPP4R3A-206ENST00000554943 IL1AP01583 271 aa11.83□□□□□ -0.52
PPP4R3A-206ENST00000554943 FHP07954 510 aa11.83□□□□□ -0.52
PPP4R3A-206ENST00000554943 ZNF136P52737 540 aa11.83□□□□□ -0.52
PPP4R3A-206ENST00000554943 FXYD6P3P58550 94 aa11.83□□□□□ -0.52
PPP4R3A-206ENST00000554943 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.83□□□□□ -0.52
PPP4R3A-206ENST00000554943 HSPB3Q12988 150 aa11.83□□□□□ -0.52
PPP4R3A-206ENST00000554943 TSPAN31Q12999 210 aa11.83□□□□□ -0.52
PPP4R3A-206ENST00000554943 PIN1Q13526 163 aaPredicted RBP11.83□□□□□ -0.52
PPP4R3A-206ENST00000554943 GPR50Q13585 617 aa11.83□□□□□ -0.52
PPP4R3A-206ENST00000554943 SPHARQ15513 63 aa11.83□□□□□ -0.52
PPP4R3A-206ENST00000554943 TIMM50Q3ZCQ8 353 aa11.83□□□□□ -0.52
PPP4R3A-206ENST00000554943 PRICKLE2Q7Z3G6 844 aa11.83□□□□□ -0.52
PPP4R3A-206ENST00000554943 PLD3Q8IV08 490 aa11.83□□□□□ -0.52
PPP4R3A-206ENST00000554943 C12orf76Q8N812 135 aaPredicted RBP11.83□□□□□ -0.52
PPP4R3A-206ENST00000554943 RSC1A1Q92681 617 aa11.83□□□□□ -0.52
PPP4R3A-206ENST00000554943 OR7D2Q96RA2 312 aa11.83□□□□□ -0.52
PPP4R3A-206ENST00000554943 PRSS27Q9BQR3 290 aa11.83□□□□□ -0.52
PPP4R3A-206ENST00000554943 ARHGAP9Q9BRR9 750 aa11.83□□□□□ -0.52
PPP4R3A-206ENST00000554943 SPHK1Q9NYA1 384 aa11.83□□□□□ -0.52
PPP4R3A-206ENST00000554943 M0R3H8 397 aa11.82□□□□□ -0.52
PPP4R3A-206ENST00000554943 FOXS1O43638 330 aa11.82□□□□□ -0.52
PPP4R3A-206ENST00000554943 OR1F1O43749 312 aa11.82□□□□□ -0.52
PPP4R3A-206ENST00000554943 PRKRAO75569 313 aaKnown RBP11.82□□□□□ -0.52
PPP4R3A-206ENST00000554943 FHL1Q13642 323 aa11.82□□□□□ -0.52
PPP4R3A-206ENST00000554943 MINDY4Q4G0A6 757 aa11.82□□□□□ -0.52
PPP4R3A-206ENST00000554943 ZNF628Q5EBL2 1059 aa11.82□□□□□ -0.52
PPP4R3A-206ENST00000554943 FRRS1Q6ZNA5 592 aa11.82□□□□□ -0.52
PPP4R3A-206ENST00000554943 MED17Q9NVC6 651 aa11.82□□□□□ -0.52
PPP4R3A-206ENST00000554943 FAM32AQ9Y421 112 aaKnown RBP11.82□□□□□ -0.52
PPP4R3A-206ENST00000554943 PLEKHM1Q9Y4G2 1056 aa11.82□□□□□ -0.52
PPP4R3A-206ENST00000554943 ADAMTS20P59510 1910 aa11.82□□□□□ -0.52
PPP4R3A-206ENST00000554943 LOC110117498-PIK3R3F6TDL0 507 aa11.82□□□□□ -0.52
PPP4R3A-206ENST00000554943 LIMS3P0CW19 117 aa11.82□□□□□ -0.52
PPP4R3A-206ENST00000554943 LIMS4P0CW20 117 aa11.82□□□□□ -0.52
PPP4R3A-206ENST00000554943 GSTM3P21266 225 aa11.82□□□□□ -0.52
PPP4R3A-206ENST00000554943 FPR3P25089 353 aa11.82□□□□□ -0.52
PPP4R3A-206ENST00000554943 CA8P35219 290 aa11.82□□□□□ -0.52
PPP4R3A-206ENST00000554943 SOAT1P35610 550 aa11.82□□□□□ -0.52
PPP4R3A-206ENST00000554943 RPS21P63220 83 aaKnown RBP11.82□□□□□ -0.52
PPP4R3A-206ENST00000554943 LRIT3Q3SXY7 679 aa11.82□□□□□ -0.52
PPP4R3A-206ENST00000554943 C2orf73Q8N5S3 287 aaPredicted RBP11.82□□□□□ -0.52
PPP4R3A-206ENST00000554943 OR4K5Q8NGD3 323 aa11.82□□□□□ -0.52
PPP4R3A-206ENST00000554943 PIK3R3Q92569 461 aa11.82□□□□□ -0.52
PPP4R3A-206ENST00000554943 TSSK6Q9BXA6 273 aa11.82□□□□□ -0.52
PPP4R3A-206ENST00000554943 SURF4O15260 269 aa11.82□□□□□ -0.52
PPP4R3A-206ENST00000554943 HMGN2P05204 90 aaKnown RBP11.82□□□□□ -0.52
PPP4R3A-206ENST00000554943 SLC35G4P0C7Q5 338 aa11.82□□□□□ -0.52
PPP4R3A-206ENST00000554943 SLAMF1Q13291 335 aa11.82□□□□□ -0.52
PPP4R3A-206ENST00000554943 SUSD6Q92537 303 aa11.82□□□□□ -0.52
PPP4R3A-206ENST00000554943 KIAA1143Q96AT1 154 aaPredicted RBP11.82□□□□□ -0.52
PPP4R3A-206ENST00000554943 EXOSC8Q96B26 276 aaKnown RBP11.82□□□□□ -0.52
PPP4R3A-206ENST00000554943 SEMA4GQ9NTN9 838 aa11.82□□□□□ -0.52
PPP4R3A-206ENST00000554943 LYARQ9NX58 379 aaKnown RBP11.82□□□□□ -0.52
PPP4R3A-206ENST00000554943 PCDHGB2Q9Y5G2 931 aa11.82□□□□□ -0.52
PPP4R3A-206ENST00000554943 EMC8O43402 210 aa11.81□□□□□ -0.52
PPP4R3A-206ENST00000554943 EML2O95834 649 aa11.81□□□□□ -0.52
PPP4R3A-206ENST00000554943 FEN1P39748 380 aaKnown RBP11.81□□□□□ -0.52
PPP4R3A-206ENST00000554943 CYP4F2P78329 520 aa11.81□□□□□ -0.52
PPP4R3A-206ENST00000554943 MGAT2Q10469 447 aa11.81□□□□□ -0.52
PPP4R3A-206ENST00000554943 ARHGAP11BQ3KRB8 267 aa11.81□□□□□ -0.52
PPP4R3A-206ENST00000554943 PLK5Q496M5 336 aa11.81□□□□□ -0.52
PPP4R3A-206ENST00000554943 PERM1Q5SV97 790 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms