RNA–Protein interactions for RNA: ENST00000554409.1

LINC00640-201, long intergenic non-protein coding RNA 640, humanhuman

TSL 3 BASIC

Gene LINC00640, Length 498 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00640-201ENST00000554409 DUSP8Q13202 625 aa6.92□□□□□ -1.3
LINC00640-201ENST00000554409 EXOSC7Q15024 291 aaKnown RBP6.92□□□□□ -1.3
LINC00640-201ENST00000554409 LTB4RQ15722 352 aa6.92□□□□□ -1.3
LINC00640-201ENST00000554409 TRMT12Q53H54 448 aaKnown RBP6.92□□□□□ -1.3
LINC00640-201ENST00000554409 CLEC6AQ6EIG7 209 aa6.92□□□□□ -1.3
LINC00640-201ENST00000554409 FAM71E1Q6IPT2 247 aa6.92□□□□□ -1.3
LINC00640-201ENST00000554409 NOXRED1Q6NXP6 359 aa6.92□□□□□ -1.3
LINC00640-201ENST00000554409 FAM180BQ6P0A1 224 aa6.92□□□□□ -1.3
LINC00640-201ENST00000554409 ARHGAP11AQ6P4F7 1023 aa6.92□□□□□ -1.3
LINC00640-201ENST00000554409 FAM111BQ6SJ93 734 aa6.92□□□□□ -1.3
LINC00640-201ENST00000554409 DOLPP1Q86YN1 238 aa6.92□□□□□ -1.3
LINC00640-201ENST00000554409 FAM9CQ8IZT9 166 aa6.92□□□□□ -1.3
LINC00640-201ENST00000554409 MEIOBQ8N635 442 aa6.92□□□□□ -1.3
LINC00640-201ENST00000554409 TMEM251Q8N6I4 163 aa6.92□□□□□ -1.3
LINC00640-201ENST00000554409 FAM13CQ8NE31 585 aa6.92□□□□□ -1.3
LINC00640-201ENST00000554409 OR10G3Q8NGC4 313 aa6.92□□□□□ -1.3
LINC00640-201ENST00000554409 OR6Y1Q8NGX8 325 aa6.92□□□□□ -1.3
LINC00640-201ENST00000554409 SPPL2AQ8TCT8 520 aa6.92□□□□□ -1.3
LINC00640-201ENST00000554409 EXOSC8Q96B26 276 aaKnown RBP6.92□□□□□ -1.3
LINC00640-201ENST00000554409 HSPBAP1Q96EW2 488 aa6.92□□□□□ -1.3
LINC00640-201ENST00000554409 ZNF764Q96H86 408 aaPredicted RBP6.92□□□□□ -1.3
LINC00640-201ENST00000554409 FCRL1Q96LA6 429 aa6.92□□□□□ -1.3
LINC00640-201ENST00000554409 DMRTA2Q96SC8 542 aa6.92□□□□□ -1.3
LINC00640-201ENST00000554409 VKORC1Q9BQB6 163 aa6.92□□□□□ -1.3
LINC00640-201ENST00000554409 MECRQ9BV79 373 aa6.92□□□□□ -1.3
LINC00640-201ENST00000554409 ITPAQ9BY32 194 aa6.92□□□□□ -1.3
LINC00640-201ENST00000554409 STMN4Q9H169 189 aaPredicted RBP6.92□□□□□ -1.3
LINC00640-201ENST00000554409 ZNF703Q9H7S9 590 aaPredicted RBP6.92□□□□□ -1.3
LINC00640-201ENST00000554409 PROK2Q9HC23 129 aa6.92□□□□□ -1.3
LINC00640-201ENST00000554409 EML4Q9HC35 981 aaKnown RBP6.92□□□□□ -1.3
LINC00640-201ENST00000554409 SLC35C2Q9NQQ7 365 aa6.92□□□□□ -1.3
LINC00640-201ENST00000554409 GIMAP4Q9NUV9 329 aa6.92□□□□□ -1.3
LINC00640-201ENST00000554409 C1orf109Q9NX04 203 aa6.92□□□□□ -1.3
LINC00640-201ENST00000554409 QPCTLQ9NXS2 382 aa6.92□□□□□ -1.3
LINC00640-201ENST00000554409 TUBA8Q9NY65 449 aaPredicted RBP6.92□□□□□ -1.3
LINC00640-201ENST00000554409 PRODH2Q9UF12 536 aa6.92□□□□□ -1.3
LINC00640-201ENST00000554409 SH3BGRL2Q9UJC5 107 aa6.92□□□□□ -1.3
LINC00640-201ENST00000554409 BOKQ9UMX3 212 aaPredicted RBP6.92□□□□□ -1.3
LINC00640-201ENST00000554409 ENTPD4Q9Y227 616 aa6.92□□□□□ -1.3
LINC00640-201ENST00000554409 MEMO1Q9Y316 297 aa6.92□□□□□ -1.3
LINC00640-201ENST00000554409 DNAJC15Q9Y5T4 150 aa6.92□□□□□ -1.3
LINC00640-201ENST00000554409 KLF2Q9Y5W3 355 aaPredicted RBP6.92□□□□□ -1.3
LINC00640-201ENST00000554409 SEC23IPQ9Y6Y8 1000 aaKnown RBP6.92□□□□□ -1.3
LINC00640-201ENST00000554409 SPTAN1Q13813 2472 aaKnown RBP6.91□□□□□ -1.3
LINC00640-201ENST00000554409 A0A087WV62 115 aa6.91□□□□□ -1.3
LINC00640-201ENST00000554409 FRG2CA6NGY1 282 aa6.91□□□□□ -1.3
LINC00640-201ENST00000554409 LRRC3CA6NJW4 275 aa6.91□□□□□ -1.3
LINC00640-201ENST00000554409 FAM166BA8MTA8 275 aa6.91□□□□□ -1.3
LINC00640-201ENST00000554409 G3V3Y1 287 aa6.91□□□□□ -1.3
LINC00640-201ENST00000554409 AQP7O14520 342 aa6.91□□□□□ -1.3
LINC00640-201ENST00000554409 ADAM10O14672 748 aa6.91□□□□□ -1.3
LINC00640-201ENST00000554409 TO15178 435 aa6.91□□□□□ -1.3
LINC00640-201ENST00000554409 RGS14O43566 566 aa6.91□□□□□ -1.3
LINC00640-201ENST00000554409 SUSD5O60279 629 aa6.91□□□□□ -1.3
LINC00640-201ENST00000554409 CDC40O60508 579 aaKnown RBP eCLIP6.91□□□□□ -1.3
LINC00640-201ENST00000554409 PLOD3O60568 738 aa6.91□□□□□ -1.3
LINC00640-201ENST00000554409 TBX19O60806 448 aa6.91□□□□□ -1.3
LINC00640-201ENST00000554409 TRIM3O75382 744 aaPredicted RBP6.91□□□□□ -1.3
LINC00640-201ENST00000554409 SEC22BO75396 215 aa6.91□□□□□ -1.3
LINC00640-201ENST00000554409 PPM1BO75688 479 aa6.91□□□□□ -1.3
LINC00640-201ENST00000554409 CHRNGP07510 517 aa6.91□□□□□ -1.3
LINC00640-201ENST00000554409 BPGMP07738 259 aa6.91□□□□□ -1.3
LINC00640-201ENST00000554409 ESRRAP11474 423 aaPredicted RBP6.91□□□□□ -1.3
LINC00640-201ENST00000554409 SNRPBP14678 240 aaKnown RBP6.91□□□□□ -1.3
LINC00640-201ENST00000554409 PCSK2P16519 638 aa6.91□□□□□ -1.3
LINC00640-201ENST00000554409 DRD5P21918 477 aa6.91□□□□□ -1.3
LINC00640-201ENST00000554409 ABCD3P28288 659 aa6.91□□□□□ -1.3
LINC00640-201ENST00000554409 MPIP34949 423 aa6.91□□□□□ -1.3
LINC00640-201ENST00000554409 MAGEA5P43359 124 aa6.91□□□□□ -1.3
LINC00640-201ENST00000554409 PPICP45877 212 aa6.91□□□□□ -1.3
LINC00640-201ENST00000554409 SMSP52788 366 aa6.91□□□□□ -1.3
LINC00640-201ENST00000554409 FBXW4P57775 412 aa6.91□□□□□ -1.3
LINC00640-201ENST00000554409 KCNJ2P63252 427 aa6.91□□□□□ -1.3
LINC00640-201ENST00000554409 RPP38P78345 283 aaKnown RBP6.91□□□□□ -1.3
LINC00640-201ENST00000554409 MRPS35P82673 323 aaKnown RBP6.91□□□□□ -1.3
LINC00640-201ENST00000554409 ADORA2A-AS1P86434 159 aa6.91□□□□□ -1.3
LINC00640-201ENST00000554409 C2orf80Q0P641 193 aa6.91□□□□□ -1.3
LINC00640-201ENST00000554409 ART3Q13508 389 aa6.91□□□□□ -1.3
LINC00640-201ENST00000554409 UGT3A2Q3SY77 523 aa6.91□□□□□ -1.3
LINC00640-201ENST00000554409 KRT71Q3SY84 523 aa6.91□□□□□ -1.3
LINC00640-201ENST00000554409 TNFAIP8L3Q5GJ75 292 aa6.91□□□□□ -1.3
LINC00640-201ENST00000554409 ARL13AQ5H913 290 aaPredicted RBP6.91□□□□□ -1.3
LINC00640-201ENST00000554409 PRAMEF20Q5VT98 475 aa6.91□□□□□ -1.3
LINC00640-201ENST00000554409 XKRXQ6PP77 449 aa6.91□□□□□ -1.3
LINC00640-201ENST00000554409 Q6ZSR9 355 aa6.91□□□□□ -1.3
LINC00640-201ENST00000554409 CROCCP2Q86T23 111 aa6.91□□□□□ -1.3
LINC00640-201ENST00000554409 CD163Q86VB7 1156 aa6.91□□□□□ -1.3
LINC00640-201ENST00000554409 TICAM1Q8IUC6 712 aa6.91□□□□□ -1.3
LINC00640-201ENST00000554409 CLYBLQ8N0X4 340 aa6.91□□□□□ -1.3
LINC00640-201ENST00000554409 SLC34A3Q8N130 599 aa6.91□□□□□ -1.3
LINC00640-201ENST00000554409 LINC00528Q8N1L1 170 aa6.91□□□□□ -1.3
LINC00640-201ENST00000554409 SIMC1Q8NDZ2 872 aa6.91□□□□□ -1.3
LINC00640-201ENST00000554409 ADCY4Q8NFM4 1077 aa6.91□□□□□ -1.3
LINC00640-201ENST00000554409 OR52R1Q8NGF1 315 aa6.91□□□□□ -1.3
LINC00640-201ENST00000554409 OR9A2Q8NGT5 310 aa6.91□□□□□ -1.3
LINC00640-201ENST00000554409 OR2T11Q8NH01 316 aa6.91□□□□□ -1.3
LINC00640-201ENST00000554409 DIO2Q92813 273 aa6.91□□□□□ -1.3
LINC00640-201ENST00000554409 HGDQ93099 445 aa6.91□□□□□ -1.3
LINC00640-201ENST00000554409 ZNF775Q96BV0 537 aaPredicted RBP6.91□□□□□ -1.3
LINC00640-201ENST00000554409 TMEM41AQ96HV5 264 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms