RNA–Protein interactions for RNA: ENST00000554180.5

TDP1-209, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-209ENST00000554180 P2RX2Q9UBL9 471 aa7.14□□□□□ -1.27
TDP1-209ENST00000554180 EGFL7Q9UHF1 273 aa7.14□□□□□ -1.27
TDP1-209ENST00000554180 C3orf18Q9UK00 162 aa7.14□□□□□ -1.27
TDP1-209ENST00000554180 PADI1Q9ULC6 663 aa7.14□□□□□ -1.27
TDP1-209ENST00000554180 PPIEQ9UNP9 301 aaKnown RBP7.14□□□□□ -1.27
TDP1-209ENST00000554180 SATB2Q9UPW6 733 aa7.14□□□□□ -1.27
TDP1-209ENST00000554180 LIPT1Q9Y234 373 aa7.14□□□□□ -1.27
TDP1-209ENST00000554180 ANGPT4Q9Y264 503 aa7.14□□□□□ -1.27
TDP1-209ENST00000554180 CFL2Q9Y281 166 aa7.14□□□□□ -1.27
TDP1-209ENST00000554180 PADI2Q9Y2J8 665 aa7.14□□□□□ -1.27
TDP1-209ENST00000554180 CLCA3PQ9Y6N3 262 aa7.14□□□□□ -1.27
TDP1-209ENST00000554180 NUP210LQ5VU65 1888 aa7.13□□□□□ -1.27
TDP1-209ENST00000554180 LOC102723996A0A087X1L8 192 aa7.13□□□□□ -1.27
TDP1-209ENST00000554180 A0A1W2PQ72 361 aa7.13□□□□□ -1.27
TDP1-209ENST00000554180 OR6C76A6NM76 312 aa7.13□□□□□ -1.27
TDP1-209ENST00000554180 A8MUI8 341 aa7.13□□□□□ -1.27
TDP1-209ENST00000554180 C17orf105B2RV13 164 aa7.13□□□□□ -1.27
TDP1-209ENST00000554180 C21orf140B9A014 251 aa7.13□□□□□ -1.27
TDP1-209ENST00000554180 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.13□□□□□ -1.27
TDP1-209ENST00000554180 BRINP1O60477 761 aa7.13□□□□□ -1.27
TDP1-209ENST00000554180 CNOT3O75175 753 aaKnown RBP7.13□□□□□ -1.27
TDP1-209ENST00000554180 CREG1O75629 220 aa7.13□□□□□ -1.27
TDP1-209ENST00000554180 PDE9AO76083 593 aa7.13□□□□□ -1.27
TDP1-209ENST00000554180 TNFSF15O95150 251 aa7.13□□□□□ -1.27
TDP1-209ENST00000554180 IFNA14P01570 189 aa7.13□□□□□ -1.27
TDP1-209ENST00000554180 IGHEP01854 428 aa7.13□□□□□ -1.27
TDP1-209ENST00000554180 C1QCP02747 245 aa7.13□□□□□ -1.27
TDP1-209ENST00000554180 IGKV3-11P04433 115 aa7.13□□□□□ -1.27
TDP1-209ENST00000554180 GPIP06744 558 aa7.13□□□□□ -1.27
TDP1-209ENST00000554180 GUSBP08236 651 aa7.13□□□□□ -1.27
TDP1-209ENST00000554180 NUDT7P0C024 238 aa7.13□□□□□ -1.27
TDP1-209ENST00000554180 TFPTP0C1Z6 253 aa7.13□□□□□ -1.27
TDP1-209ENST00000554180 CT62P0C5K7 136 aa7.13□□□□□ -1.27
TDP1-209ENST00000554180 TNNI3P19429 210 aa7.13□□□□□ -1.27
TDP1-209ENST00000554180 ATP6V1B2P21281 511 aa7.13□□□□□ -1.27
TDP1-209ENST00000554180 PSMA4P25789 261 aaKnown RBP7.13□□□□□ -1.27
TDP1-209ENST00000554180 PTGER1P34995 402 aa7.13□□□□□ -1.27
TDP1-209ENST00000554180 MAP3K8P41279 467 aa7.13□□□□□ -1.27
TDP1-209ENST00000554180 EFNA3P52797 238 aa7.13□□□□□ -1.27
TDP1-209ENST00000554180 CRISP3P54108 245 aa7.13□□□□□ -1.27
TDP1-209ENST00000554180 PRKAG1P54619 331 aa7.13□□□□□ -1.27
TDP1-209ENST00000554180 EMP2P54851 167 aa7.13□□□□□ -1.27
TDP1-209ENST00000554180 PCBP3P57721 371 aaKnown RBP7.13□□□□□ -1.27
TDP1-209ENST00000554180 RPS26P62854 115 aaKnown RBP7.13□□□□□ -1.27
TDP1-209ENST00000554180 CDK6Q00534 326 aa7.13□□□□□ -1.27
TDP1-209ENST00000554180 SCARB2Q14108 478 aa7.13□□□□□ -1.27
TDP1-209ENST00000554180 ZNF267Q14586 743 aaPredicted RBP7.13□□□□□ -1.27
TDP1-209ENST00000554180 MYBPC3Q14896 1274 aa7.13□□□□□ -1.27
TDP1-209ENST00000554180 ZNHIT3Q15649 155 aaPredicted RBP7.13□□□□□ -1.27
TDP1-209ENST00000554180 ATAD3BQ5T9A4 648 aa7.13□□□□□ -1.27
TDP1-209ENST00000554180 MLIPQ5VWP3 458 aa7.13□□□□□ -1.27
TDP1-209ENST00000554180 REEP3Q6NUK4 255 aa7.13□□□□□ -1.27
TDP1-209ENST00000554180 TMEM205Q6UW68 189 aa7.13□□□□□ -1.27
TDP1-209ENST00000554180 DGAT2L6Q6ZPD8 337 aa7.13□□□□□ -1.27
TDP1-209ENST00000554180 PATL1Q86TB9 770 aaKnown RBP7.13□□□□□ -1.27
TDP1-209ENST00000554180 LAPTM4BQ86VI4 370 aa7.13□□□□□ -1.27
TDP1-209ENST00000554180 SPATA24Q86W54 205 aa7.13□□□□□ -1.27
TDP1-209ENST00000554180 MORN4Q8NDC4 146 aa7.13□□□□□ -1.27
TDP1-209ENST00000554180 OR52R1Q8NGF1 315 aa7.13□□□□□ -1.27
TDP1-209ENST00000554180 OR2Y1Q8NGV0 311 aa7.13□□□□□ -1.27
TDP1-209ENST00000554180 SLC26A7Q8TE54 656 aa7.13□□□□□ -1.27
TDP1-209ENST00000554180 ADAMTS15Q8TE58 950 aa7.13□□□□□ -1.27
TDP1-209ENST00000554180 SLC38A5Q8WUX1 472 aa7.13□□□□□ -1.27
TDP1-209ENST00000554180 FIG4Q92562 907 aa7.13□□□□□ -1.27
TDP1-209ENST00000554180 PMM1Q92871 262 aa7.13□□□□□ -1.27
TDP1-209ENST00000554180 FAM162AQ96A26 154 aa7.13□□□□□ -1.27
TDP1-209ENST00000554180 NACC2Q96BF6 587 aa7.13□□□□□ -1.27
TDP1-209ENST00000554180 RSRC1Q96IZ7 334 aaKnown RBP7.13□□□□□ -1.27
TDP1-209ENST00000554180 MAGED4Q96JG8 741 aa7.13□□□□□ -1.27
TDP1-209ENST00000554180 VSTM2LQ96N03 204 aa7.13□□□□□ -1.27
TDP1-209ENST00000554180 TRNT1Q96Q11 434 aaKnown RBP7.13□□□□□ -1.27
TDP1-209ENST00000554180 OR7D2Q96RA2 312 aa7.13□□□□□ -1.27
TDP1-209ENST00000554180 LMF2Q9BU23 707 aaKnown RBP7.13□□□□□ -1.27
TDP1-209ENST00000554180 CNPPD1Q9BV87 410 aa7.13□□□□□ -1.27
TDP1-209ENST00000554180 BTBD2Q9BX70 525 aa7.13□□□□□ -1.27
TDP1-209ENST00000554180 TMEM121BQ9BXQ6 578 aaPredicted RBP7.13□□□□□ -1.27
TDP1-209ENST00000554180 OR51I1Q9H343 314 aa7.13□□□□□ -1.27
TDP1-209ENST00000554180 PIGUQ9H490 435 aa7.13□□□□□ -1.27
TDP1-209ENST00000554180 PIF1Q9H611 641 aa7.13□□□□□ -1.27
TDP1-209ENST00000554180 SOX17Q9H6I2 414 aaPredicted RBP7.13□□□□□ -1.27
TDP1-209ENST00000554180 DCLRE1BQ9H816 532 aa7.13□□□□□ -1.27
TDP1-209ENST00000554180 BCL2L10Q9HD36 194 aa7.13□□□□□ -1.27
TDP1-209ENST00000554180 EQTNQ9NQ60 294 aa7.13□□□□□ -1.27
TDP1-209ENST00000554180 POLE3Q9NRF9 147 aa7.13□□□□□ -1.27
TDP1-209ENST00000554180 PNO1Q9NRX1 252 aaKnown RBP7.13□□□□□ -1.27
TDP1-209ENST00000554180 DCAF13Q9NV06 445 aaKnown RBP7.13□□□□□ -1.27
TDP1-209ENST00000554180 FOXJ2Q9P0K8 574 aa7.13□□□□□ -1.27
TDP1-209ENST00000554180 GMPR2Q9P2T1 348 aaKnown RBP7.13□□□□□ -1.27
TDP1-209ENST00000554180 COPS7AQ9UBW8 275 aa7.13□□□□□ -1.27
TDP1-209ENST00000554180 PRODH2Q9UF12 536 aa7.13□□□□□ -1.27
TDP1-209ENST00000554180 USP22Q9UPT9 525 aa7.13□□□□□ -1.27
TDP1-209ENST00000554180 SAMD4AQ9UPU9 718 aaKnown RBP7.13□□□□□ -1.27
TDP1-209ENST00000554180 ERVK-19Q9WJR5 959 aa7.13□□□□□ -1.27
TDP1-209ENST00000554180 HEMK1Q9Y5R4 338 aaPredicted RBP7.13□□□□□ -1.27
TDP1-209ENST00000554180 DMXL1Q9Y485 3027 aa7.12□□□□□ -1.27
TDP1-209ENST00000554180 KIF26BQ2KJY2 2108 aa7.12□□□□□ -1.27
TDP1-209ENST00000554180 DSPPQ9NZW4 1301 aa7.12□□□□□ -1.27
TDP1-209ENST00000554180 TCRBV5S2A0A599 114 aa7.12□□□□□ -1.27
TDP1-209ENST00000554180 DHRS12A0PJE2 317 aa7.12□□□□□ -1.27
TDP1-209ENST00000554180 PMS2P1A4D2B8 440 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms