RNA–Protein interactions for RNA: ENST00000553405.1

MTHFD1-204, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 833 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-204ENST00000553405 VPS26BQ4G0F5 336 aa13.74□□□□□ -0.21
MTHFD1-204ENST00000553405 PAGE3Q5JUK9 113 aa13.74□□□□□ -0.21
MTHFD1-204ENST00000553405 ACER2Q5QJU3 275 aa13.74□□□□□ -0.21
MTHFD1-204ENST00000553405 ZNF468Q5VIY5 522 aaPredicted RBP13.74□□□□□ -0.21
MTHFD1-204ENST00000553405 SLC2A7Q6PXP3 512 aa13.74□□□□□ -0.21
MTHFD1-204ENST00000553405 IGFL3Q6UXB1 125 aa13.74□□□□□ -0.21
MTHFD1-204ENST00000553405 RPS19BP1Q86WX3 136 aaKnown RBP13.74□□□□□ -0.21
MTHFD1-204ENST00000553405 ZNF227Q86WZ6 799 aa13.74□□□□□ -0.21
MTHFD1-204ENST00000553405 MSRB3Q8IXL7 192 aa13.74□□□□□ -0.21
MTHFD1-204ENST00000553405 CLEC4FQ8N1N0 589 aa13.74□□□□□ -0.21
MTHFD1-204ENST00000553405 TSPEARQ8WU66 669 aa13.74□□□□□ -0.21
MTHFD1-204ENST00000553405 ABHD17AQ96GS6 310 aa13.74□□□□□ -0.21
MTHFD1-204ENST00000553405 ITPAQ9BY32 194 aa13.74□□□□□ -0.21
MTHFD1-204ENST00000553405 PAIP1Q9H074 479 aaKnown RBP13.74□□□□□ -0.21
MTHFD1-204ENST00000553405 SERHL2Q9H4I8 314 aa13.74□□□□□ -0.21
MTHFD1-204ENST00000553405 FOLH1BQ9HBA9 442 aa13.74□□□□□ -0.21
MTHFD1-204ENST00000553405 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.74□□□□□ -0.21
MTHFD1-204ENST00000553405 SLAMF8Q9P0V8 285 aa13.74□□□□□ -0.21
MTHFD1-204ENST00000553405 TUBD1Q9UJT1 453 aa13.74□□□□□ -0.21
MTHFD1-204ENST00000553405 ARL2BPQ9Y2Y0 163 aa13.74□□□□□ -0.21
MTHFD1-204ENST00000553405 SPTA1P02549 2419 aa13.73□□□□□ -0.21
MTHFD1-204ENST00000553405 EXPH5Q8NEV8 1989 aa13.73□□□□□ -0.21
MTHFD1-204ENST00000553405 A8MUI8 341 aa13.73□□□□□ -0.21
MTHFD1-204ENST00000553405 CFLARO15519 480 aa13.73□□□□□ -0.21
MTHFD1-204ENST00000553405 EMC8O43402 210 aa13.73□□□□□ -0.21
MTHFD1-204ENST00000553405 BCAS2O75934 225 aaPredicted RBP13.73□□□□□ -0.21
MTHFD1-204ENST00000553405 MAN2A2P49641 1150 aa13.73□□□□□ -0.21
MTHFD1-204ENST00000553405 MVDP53602 400 aa13.73□□□□□ -0.21
MTHFD1-204ENST00000553405 CORO7P57737 925 aa13.73□□□□□ -0.21
MTHFD1-204ENST00000553405 PSG6Q00889 435 aa13.73□□□□□ -0.21
MTHFD1-204ENST00000553405 KCNAB2Q13303 367 aa13.73□□□□□ -0.21
MTHFD1-204ENST00000553405 MFAP5Q13361 173 aa13.73□□□□□ -0.21
MTHFD1-204ENST00000553405 GTDC1Q4AE62 458 aa13.73□□□□□ -0.21
MTHFD1-204ENST00000553405 PIGGQ5H8A4 983 aa13.73□□□□□ -0.21
MTHFD1-204ENST00000553405 LRIF1Q5T3J3 769 aa13.73□□□□□ -0.21
MTHFD1-204ENST00000553405 C6orf163Q5TEZ5 329 aa13.73□□□□□ -0.21
MTHFD1-204ENST00000553405 AGAP7PQ5VUJ5 663 aa13.73□□□□□ -0.21
MTHFD1-204ENST00000553405 FAM91A1Q658Y4 838 aa13.73□□□□□ -0.21
MTHFD1-204ENST00000553405 MFSD12Q6NUT3 480 aa13.73□□□□□ -0.21
MTHFD1-204ENST00000553405 ISLR2Q6UXK2 745 aa13.73□□□□□ -0.21
MTHFD1-204ENST00000553405 DLEU7Q6UYE1 221 aa13.73□□□□□ -0.21
MTHFD1-204ENST00000553405 BEST3Q8N1M1 668 aa13.73□□□□□ -0.21
MTHFD1-204ENST00000553405 DPP10Q8N608 796 aa13.73□□□□□ -0.21
MTHFD1-204ENST00000553405 SLC5A8Q8N695 610 aa13.73□□□□□ -0.21
MTHFD1-204ENST00000553405 NUP43Q8NFH3 380 aa13.73□□□□□ -0.21
MTHFD1-204ENST00000553405 OR4A15Q8NGL6 344 aa13.73□□□□□ -0.21
MTHFD1-204ENST00000553405 THAP3Q8WTV1 239 aaPredicted RBP13.73□□□□□ -0.21
MTHFD1-204ENST00000553405 TP53INP1Q96A56 240 aa13.73□□□□□ -0.21
MTHFD1-204ENST00000553405 AGAP4Q96P64 663 aa13.73□□□□□ -0.21
MTHFD1-204ENST00000553405 MS4A4EQ96PG1 132 aa13.73□□□□□ -0.21
MTHFD1-204ENST00000553405 LMF1Q96S06 567 aa13.73□□□□□ -0.21
MTHFD1-204ENST00000553405 RASL10BQ96S79 203 aa13.73□□□□□ -0.21
MTHFD1-204ENST00000553405 LMF2Q9BU23 707 aaKnown RBP13.73□□□□□ -0.21
MTHFD1-204ENST00000553405 SLC25A23Q9BV35 468 aa13.73□□□□□ -0.21
MTHFD1-204ENST00000553405 RNF32Q9H0A6 362 aa13.73□□□□□ -0.21
MTHFD1-204ENST00000553405 NXF5Q9H1B4 397 aaKnown RBP13.73□□□□□ -0.21
MTHFD1-204ENST00000553405 ADNPQ9H2P0 1102 aa13.73□□□□□ -0.21
MTHFD1-204ENST00000553405 CDCP1Q9H5V8 836 aa13.73□□□□□ -0.21
MTHFD1-204ENST00000553405 TRIM45Q9H8W5 580 aaPredicted RBP13.73□□□□□ -0.21
MTHFD1-204ENST00000553405 MRGBPQ9NV56 204 aa13.73□□□□□ -0.21
MTHFD1-204ENST00000553405 DDX18Q9NVP1 670 aaKnown RBP13.73□□□□□ -0.21
MTHFD1-204ENST00000553405 SLC25A37Q9NYZ2 338 aa13.73□□□□□ -0.21
MTHFD1-204ENST00000553405 BCAP29Q9UHQ4 241 aa13.73□□□□□ -0.21
MTHFD1-204ENST00000553405 GMEB1Q9Y692 573 aa13.73□□□□□ -0.21
MTHFD1-204ENST00000553405 PRRC2CQ9Y520 2896 aaKnown RBP13.72□□□□□ -0.21
MTHFD1-204ENST00000553405 DYTNA2CJ06 578 aa13.72□□□□□ -0.21
MTHFD1-204ENST00000553405 CCDC154A6NI56 674 aa13.72□□□□□ -0.21
MTHFD1-204ENST00000553405 ERVH48-1M5A8F1 160 aa13.72□□□□□ -0.21
MTHFD1-204ENST00000553405 TO15178 435 aa13.72□□□□□ -0.21
MTHFD1-204ENST00000553405 CCDC22O60826 627 aa13.72□□□□□ -0.21
MTHFD1-204ENST00000553405 COQ9O75208 318 aa13.72□□□□□ -0.21
MTHFD1-204ENST00000553405 OR2J2O76002 312 aa13.72□□□□□ -0.21
MTHFD1-204ENST00000553405 CPSF4O95639 269 aaKnown RBP13.72□□□□□ -0.21
MTHFD1-204ENST00000553405 ABCB1P08183 1280 aaPredicted RBP13.72□□□□□ -0.21
MTHFD1-204ENST00000553405 ZCCHC18P0CG32 403 aa13.72□□□□□ -0.21
MTHFD1-204ENST00000553405 DRD5P21918 477 aa13.72□□□□□ -0.21
MTHFD1-204ENST00000553405 GPC1P35052 558 aa13.72□□□□□ -0.21
MTHFD1-204ENST00000553405 PPICP45877 212 aa13.72□□□□□ -0.21
MTHFD1-204ENST00000553405 TRPC1P48995 793 aa13.72□□□□□ -0.21
MTHFD1-204ENST00000553405 CCT3P49368 545 aaKnown RBP13.72□□□□□ -0.21
MTHFD1-204ENST00000553405 KCNK10P57789 538 aa13.72□□□□□ -0.21
MTHFD1-204ENST00000553405 LRRC74AQ0VAA2 488 aa13.72□□□□□ -0.21
MTHFD1-204ENST00000553405 MEP1AQ16819 746 aa13.72□□□□□ -0.21
MTHFD1-204ENST00000553405 SAXO2Q658L1 398 aa13.72□□□□□ -0.21
MTHFD1-204ENST00000553405 SLC29A4Q7RTT9 530 aa13.72□□□□□ -0.21
MTHFD1-204ENST00000553405 WDR53Q7Z5U6 358 aaPredicted RBP13.72□□□□□ -0.21
MTHFD1-204ENST00000553405 VPS37AQ8NEZ2 397 aa13.72□□□□□ -0.21
MTHFD1-204ENST00000553405 OR5L2Q8NGL0 311 aa13.72□□□□□ -0.21
MTHFD1-204ENST00000553405 OR5AK3PQ8NH89 298 aa13.72□□□□□ -0.21
MTHFD1-204ENST00000553405 NEURL3Q96EH8 262 aa13.72□□□□□ -0.21
MTHFD1-204ENST00000553405 WBP1Q96G27 269 aa13.72□□□□□ -0.21
MTHFD1-204ENST00000553405 C16orf58Q96GQ5 468 aa13.72□□□□□ -0.21
MTHFD1-204ENST00000553405 ITCHQ96J02 903 aa13.72□□□□□ -0.21
MTHFD1-204ENST00000553405 MAGED4Q96JG8 741 aa13.72□□□□□ -0.21
MTHFD1-204ENST00000553405 ZNF354BQ96LW1 612 aa13.72□□□□□ -0.21
MTHFD1-204ENST00000553405 ZCCHC3Q9NUD5 404 aaKnown RBP13.72□□□□□ -0.21
MTHFD1-204ENST00000553405 MAP10Q9P2G4 905 aa13.72□□□□□ -0.21
MTHFD1-204ENST00000553405 PRODH2Q9UF12 536 aa13.72□□□□□ -0.21
MTHFD1-204ENST00000553405 PCDHGB7Q9Y5F8 929 aa13.72□□□□□ -0.21
MTHFD1-204ENST00000553405 CSAG2Q9Y5P2 127 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms