RNA–Protein interactions for RNA: ENST00000553280.1

SCFD1-209, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-209ENST00000553280 CHIT1Q13231 466 aa4.22□□□□□ -1.73
SCFD1-209ENST00000553280 GPM6BQ13491 265 aa4.22□□□□□ -1.73
SCFD1-209ENST00000553280 FASTKQ14296 549 aaKnown RBP4.22□□□□□ -1.73
SCFD1-209ENST00000553280 EMC2Q15006 297 aa4.22□□□□□ -1.73
SCFD1-209ENST00000553280 PDK4Q16654 411 aa4.22□□□□□ -1.73
SCFD1-209ENST00000553280 ECSCRQ19T08 205 aa4.22□□□□□ -1.73
SCFD1-209ENST00000553280 CFAP157Q5JU67 520 aa4.22□□□□□ -1.73
SCFD1-209ENST00000553280 DMKNQ6E0U4 476 aaPredicted RBP4.22□□□□□ -1.73
SCFD1-209ENST00000553280 ATRAIDQ6UW56 229 aa4.22□□□□□ -1.73
SCFD1-209ENST00000553280 NR2C2APQ86WQ0 139 aa4.22□□□□□ -1.73
SCFD1-209ENST00000553280 ZFAND4Q86XD8 727 aa4.22□□□□□ -1.73
SCFD1-209ENST00000553280 KLHDC8BQ8IXV7 354 aa4.22□□□□□ -1.73
SCFD1-209ENST00000553280 TTC25Q96NG3 672 aa4.22□□□□□ -1.73
SCFD1-209ENST00000553280 CASD1Q96PB1 797 aa4.22□□□□□ -1.73
SCFD1-209ENST00000553280 RCHY1Q96PM5 261 aa4.22□□□□□ -1.73
SCFD1-209ENST00000553280 LITAFQ99732 161 aa4.22□□□□□ -1.73
SCFD1-209ENST00000553280 C19orf43Q9BQ61 176 aa4.22□□□□□ -1.73
SCFD1-209ENST00000553280 TBCDQ9BTW9 1192 aa4.22□□□□□ -1.73
SCFD1-209ENST00000553280 ZSCAN5AQ9BUG6 496 aa4.22□□□□□ -1.73
SCFD1-209ENST00000553280 NT5DC2Q9H857 520 aa4.22□□□□□ -1.73
SCFD1-209ENST00000553280 GORASP2Q9H8Y8 452 aa4.22□□□□□ -1.73
SCFD1-209ENST00000553280 CALHM2Q9HA72 323 aa4.22□□□□□ -1.73
SCFD1-209ENST00000553280 GHRLQ9UBU3 117 aa4.22□□□□□ -1.73
SCFD1-209ENST00000553280 EMCNQ9ULC0 261 aa4.22□□□□□ -1.73
SCFD1-209ENST00000553280 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP4.22□□□□□ -1.73
SCFD1-209ENST00000553280 MAB21L2Q9Y586 359 aa4.22□□□□□ -1.73
SCFD1-209ENST00000553280 A0A0J9YVX5 310 aa4.21□□□□□ -1.74
SCFD1-209ENST00000553280 TTC26A0AVF1 554 aa4.21□□□□□ -1.74
SCFD1-209ENST00000553280 IGLON5A6NGN9 336 aa4.21□□□□□ -1.74
SCFD1-209ENST00000553280 FBLL1A6NHQ2 334 aaKnown RBP4.21□□□□□ -1.74
SCFD1-209ENST00000553280 IFITM10A6NMD0 228 aa4.21□□□□□ -1.74
SCFD1-209ENST00000553280 PRSS44E7EML9 344 aa4.21□□□□□ -1.74
SCFD1-209ENST00000553280 H3BMH7 237 aa4.21□□□□□ -1.74
SCFD1-209ENST00000553280 PDLIM1O00151 329 aa4.21□□□□□ -1.74
SCFD1-209ENST00000553280 FRAT2O75474 233 aaPredicted RBP4.21□□□□□ -1.74
SCFD1-209ENST00000553280 ZNF821O75541 412 aaPredicted RBP4.21□□□□□ -1.74
SCFD1-209ENST00000553280 RHOBTB1O94844 696 aa4.21□□□□□ -1.74
SCFD1-209ENST00000553280 IGLV1-44P01699 117 aa4.21□□□□□ -1.74
SCFD1-209ENST00000553280 OPN1MWP04001 364 aa4.21□□□□□ -1.74
SCFD1-209ENST00000553280 GSTT2P0CG29 244 aa4.21□□□□□ -1.74
SCFD1-209ENST00000553280 GSTT2BP0CG30 244 aa4.21□□□□□ -1.74
SCFD1-209ENST00000553280 OPN1MW2P0DN77 364 aa4.21□□□□□ -1.74
SCFD1-209ENST00000553280 OPN1MW3P0DN78 364 aa4.21□□□□□ -1.74
SCFD1-209ENST00000553280 PDHBP11177 359 aa4.21□□□□□ -1.74
SCFD1-209ENST00000553280 UQCRBP14927 111 aa4.21□□□□□ -1.74
SCFD1-209ENST00000553280 FOSL2P15408 326 aa4.21□□□□□ -1.74
SCFD1-209ENST00000553280 CD1DP15813 335 aa4.21□□□□□ -1.74
SCFD1-209ENST00000553280 ATP6V1C1P21283 382 aa4.21□□□□□ -1.74
SCFD1-209ENST00000553280 GLRA2P23416 452 aa4.21□□□□□ -1.74
SCFD1-209ENST00000553280 CYLC1P35663 651 aaPredicted RBP4.21□□□□□ -1.74
SCFD1-209ENST00000553280 DLSTP36957 453 aa4.21□□□□□ -1.74
SCFD1-209ENST00000553280 HTR5AP47898 357 aa4.21□□□□□ -1.74
SCFD1-209ENST00000553280 GSCP56915 257 aaPredicted RBP4.21□□□□□ -1.74
SCFD1-209ENST00000553280 KRTAP10-6P60371 365 aaPredicted RBP4.21□□□□□ -1.74
SCFD1-209ENST00000553280 NOP14P78316 857 aaKnown RBP4.21□□□□□ -1.74
SCFD1-209ENST00000553280 TPD52L1Q16890 204 aaPredicted RBP4.21□□□□□ -1.74
SCFD1-209ENST00000553280 TMEM30BQ3MIR4 351 aa4.21□□□□□ -1.74
SCFD1-209ENST00000553280 LRRC23Q53EV4 343 aaPredicted RBP4.21□□□□□ -1.74
SCFD1-209ENST00000553280 UNC50Q53HI1 259 aa4.21□□□□□ -1.74
SCFD1-209ENST00000553280 WDR25Q64LD2 544 aaPredicted RBP4.21□□□□□ -1.74
SCFD1-209ENST00000553280 LUZP1Q86V48 1076 aa4.21□□□□□ -1.74
SCFD1-209ENST00000553280 CARM1Q86X55 608 aa4.21□□□□□ -1.74
SCFD1-209ENST00000553280 EFCAB13Q8IY85 973 aa4.21□□□□□ -1.74
SCFD1-209ENST00000553280 CENPSQ8N2Z9 138 aa4.21□□□□□ -1.74
SCFD1-209ENST00000553280 STEAP2Q8NFT2 490 aa4.21□□□□□ -1.74
SCFD1-209ENST00000553280 OR2T3Q8NH03 318 aa4.21□□□□□ -1.74
SCFD1-209ENST00000553280 C11orf45Q8TAV5 145 aa4.21□□□□□ -1.74
SCFD1-209ENST00000553280 ATXN7L3BQ96GX2 97 aa4.21□□□□□ -1.74
SCFD1-209ENST00000553280 HPDLQ96IR7 371 aa4.21□□□□□ -1.74
SCFD1-209ENST00000553280 DUX3Q96PT4 197 aa4.21□□□□□ -1.74
SCFD1-209ENST00000553280 GPR174Q9BXC1 333 aa4.21□□□□□ -1.74
SCFD1-209ENST00000553280 PARLQ9H300 379 aa4.21□□□□□ -1.74
SCFD1-209ENST00000553280 NDE1Q9NXR1 346 aa4.21□□□□□ -1.74
SCFD1-209ENST00000553280 KLRF1Q9NZS2 232 aa4.21□□□□□ -1.74
SCFD1-209ENST00000553280 EIF3KQ9UBQ5 218 aaKnown RBP4.21□□□□□ -1.74
SCFD1-209ENST00000553280 RNF6Q9Y252 685 aa4.21□□□□□ -1.74
SCFD1-209ENST00000553280 SLC9A8Q9Y2E8 581 aa4.21□□□□□ -1.74
SCFD1-209ENST00000553280 NOTCH4Q99466 2003 aa4.21□□□□□ -1.74
SCFD1-209ENST00000553280 CCDC7Q96M83 1385 aa4.2□□□□□ -1.74
SCFD1-209ENST00000553280 WASHC1A8K0Z3 465 aa4.2□□□□□ -1.74
SCFD1-209ENST00000553280 RNF212BA8MTL3 300 aa4.2□□□□□ -1.74
SCFD1-209ENST00000553280 A8MUI8 341 aa4.2□□□□□ -1.74
SCFD1-209ENST00000553280 NPIPA2E9PIF3 369 aa4.2□□□□□ -1.74
SCFD1-209ENST00000553280 TFECO14948 347 aaPredicted RBP4.2□□□□□ -1.74
SCFD1-209ENST00000553280 JAK2O60674 1132 aa4.2□□□□□ -1.74
SCFD1-209ENST00000553280 CSF2P04141 144 aa4.2□□□□□ -1.74
SCFD1-209ENST00000553280 SP1P08047 785 aa4.2□□□□□ -1.74
SCFD1-209ENST00000553280 IQCF3P0C7M6 154 aa4.2□□□□□ -1.74
SCFD1-209ENST00000553280 ZSCAN5DPP0CG00 497 aa4.2□□□□□ -1.74
SCFD1-209ENST00000553280 RPA2P15927 270 aa4.2□□□□□ -1.74
SCFD1-209ENST00000553280 RFC2P35250 354 aa4.2□□□□□ -1.74
SCFD1-209ENST00000553280 TMEM50BP56557 158 aa4.2□□□□□ -1.74
SCFD1-209ENST00000553280 NUCB2P80303 420 aa4.2□□□□□ -1.74
SCFD1-209ENST00000553280 HMGN5P82970 282 aaKnown RBP4.2□□□□□ -1.74
SCFD1-209ENST00000553280 CNTN2Q02246 1040 aa4.2□□□□□ -1.74
SCFD1-209ENST00000553280 TMEM187Q14656 261 aa4.2□□□□□ -1.74
SCFD1-209ENST00000553280 TATDN3Q17R31 274 aa4.2□□□□□ -1.74
SCFD1-209ENST00000553280 LINC01620Q4KN68 170 aa4.2□□□□□ -1.74
SCFD1-209ENST00000553280 BSPRYQ5W0U4 402 aa4.2□□□□□ -1.74
SCFD1-209ENST00000553280 CENPPQ6IPU0 288 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms