RNA–Protein interactions for RNA: ENST00000553278.1

SCFD1-208, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 795 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-208ENST00000553278 CAPN1P07384 714 aa5.01□□□□□ -1.61
SCFD1-208ENST00000553278 ZNF735P0CB33 412 aa5.01□□□□□ -1.61
SCFD1-208ENST00000553278 CPN1P15169 458 aa5.01□□□□□ -1.61
SCFD1-208ENST00000553278 RFC2P35250 354 aa5.01□□□□□ -1.61
SCFD1-208ENST00000553278 CDKN2AP42771 156 aaKnown RBP5.01□□□□□ -1.61
SCFD1-208ENST00000553278 ZFP36L2P47974 494 aaKnown RBP5.01□□□□□ -1.61
SCFD1-208ENST00000553278 RAG2P55895 527 aa5.01□□□□□ -1.61
SCFD1-208ENST00000553278 SLC17A1Q14916 467 aa5.01□□□□□ -1.61
SCFD1-208ENST00000553278 TEAD2Q15562 447 aa5.01□□□□□ -1.61
SCFD1-208ENST00000553278 HSP90AB3PQ58FF7 597 aa5.01□□□□□ -1.61
SCFD1-208ENST00000553278 RHBDD2Q6NTF9 364 aa5.01□□□□□ -1.61
SCFD1-208ENST00000553278 LEG1Q6P5S2 330 aa5.01□□□□□ -1.61
SCFD1-208ENST00000553278 DBX2Q6ZNG2 339 aa5.01□□□□□ -1.61
SCFD1-208ENST00000553278 RUFY3Q7L099 469 aa5.01□□□□□ -1.61
SCFD1-208ENST00000553278 OR4N5Q8IXE1 308 aa5.01□□□□□ -1.61
SCFD1-208ENST00000553278 TTC5Q8N0Z6 440 aa5.01□□□□□ -1.61
SCFD1-208ENST00000553278 LRRC75A-AS1Q8N1F1 130 aa5.01□□□□□ -1.61
SCFD1-208ENST00000553278 OR5AP2Q8NGF4 316 aa5.01□□□□□ -1.61
SCFD1-208ENST00000553278 OR6F1Q8NGZ6 308 aa5.01□□□□□ -1.61
SCFD1-208ENST00000553278 ZNF671Q8TAW3 534 aa5.01□□□□□ -1.61
SCFD1-208ENST00000553278 MAPK15Q8TD08 544 aa5.01□□□□□ -1.61
SCFD1-208ENST00000553278 UPRTQ96BW1 309 aa5.01□□□□□ -1.61
SCFD1-208ENST00000553278 ZNF479Q96JC4 524 aa5.01□□□□□ -1.61
SCFD1-208ENST00000553278 SLC29A3Q9BZD2 475 aa5.01□□□□□ -1.61
SCFD1-208ENST00000553278 GPR61Q9BZJ8 451 aa5.01□□□□□ -1.61
SCFD1-208ENST00000553278 C6orf106Q9H6K1 298 aaPredicted RBP5.01□□□□□ -1.61
SCFD1-208ENST00000553278 KCNK13Q9HB14 408 aa5.01□□□□□ -1.61
SCFD1-208ENST00000553278 RAB20Q9NX57 234 aa5.01□□□□□ -1.61
SCFD1-208ENST00000553278 ZKSCAN7Q9P0L1 754 aaPredicted RBP5.01□□□□□ -1.61
SCFD1-208ENST00000553278 KLF2Q9Y5W3 355 aaPredicted RBP5.01□□□□□ -1.61
SCFD1-208ENST00000553278 ATP10DQ9P241 1426 aa5□□□□□ -1.61
SCFD1-208ENST00000553278 FBLL1A6NHQ2 334 aaKnown RBP5□□□□□ -1.61
SCFD1-208ENST00000553278 EI24O14681 340 aa5□□□□□ -1.61
SCFD1-208ENST00000553278 TPST2O60704 377 aa5□□□□□ -1.61
SCFD1-208ENST00000553278 SCGNO76038 276 aa5□□□□□ -1.61
SCFD1-208ENST00000553278 FHP07954 510 aa5□□□□□ -1.61
SCFD1-208ENST00000553278 F7P08709 466 aaPredicted RBP5□□□□□ -1.61
SCFD1-208ENST00000553278 UQCRFS1P1P0C7P4 283 aa5□□□□□ -1.61
SCFD1-208ENST00000553278 AMD1P17707 334 aa5□□□□□ -1.61
SCFD1-208ENST00000553278 GALP22466 123 aa5□□□□□ -1.61
SCFD1-208ENST00000553278 SUCLG1P53597 346 aaKnown RBP5□□□□□ -1.61
SCFD1-208ENST00000553278 PRRX1P54821 245 aa5□□□□□ -1.61
SCFD1-208ENST00000553278 CSNK2BP67870 215 aa5□□□□□ -1.61
SCFD1-208ENST00000553278 IL9RQ01113 521 aa5□□□□□ -1.61
SCFD1-208ENST00000553278 MAP2K1Q02750 393 aaPredicted RBP5□□□□□ -1.61
SCFD1-208ENST00000553278 GUCY2DQ02846 1103 aa5□□□□□ -1.61
SCFD1-208ENST00000553278 COX10Q12887 443 aa5□□□□□ -1.61
SCFD1-208ENST00000553278 BNIP1Q12981 228 aa5□□□□□ -1.61
SCFD1-208ENST00000553278 ENPP2Q13822 863 aa5□□□□□ -1.61
SCFD1-208ENST00000553278 TFDP1Q14186 410 aa5□□□□□ -1.61
SCFD1-208ENST00000553278 MESDQ14696 234 aa5□□□□□ -1.61
SCFD1-208ENST00000553278 SSX2Q16385 188 aa5□□□□□ -1.61
SCFD1-208ENST00000553278 MAPK6Q16659 721 aa5□□□□□ -1.61
SCFD1-208ENST00000553278 SGSM1Q2NKQ1 1148 aa5□□□□□ -1.61
SCFD1-208ENST00000553278 NADSYN1Q6IA69 706 aa5□□□□□ -1.61
SCFD1-208ENST00000553278 ZSCAN25Q6NSZ9 544 aa5□□□□□ -1.61
SCFD1-208ENST00000553278 TMEM184AQ6ZMB5 413 aa5□□□□□ -1.61
SCFD1-208ENST00000553278 PARGQ86W56 976 aa5□□□□□ -1.61
SCFD1-208ENST00000553278 LACC1Q8IV20 430 aa5□□□□□ -1.61
SCFD1-208ENST00000553278 VSTM4Q8IW00 320 aa5□□□□□ -1.61
SCFD1-208ENST00000553278 LSMEM2Q8N112 164 aa5□□□□□ -1.61
SCFD1-208ENST00000553278 KLHDC9Q8NEP7 349 aa5□□□□□ -1.61
SCFD1-208ENST00000553278 OR9Q2Q8NGE9 314 aa5□□□□□ -1.61
SCFD1-208ENST00000553278 OR6S1Q8NH40 331 aa5□□□□□ -1.61
SCFD1-208ENST00000553278 MYLPFQ96A32 169 aa5□□□□□ -1.61
SCFD1-208ENST00000553278 RASD2Q96D21 266 aa5□□□□□ -1.61
SCFD1-208ENST00000553278 CPXM1Q96SM3 734 aa5□□□□□ -1.61
SCFD1-208ENST00000553278 APOOQ9BUR5 198 aa5□□□□□ -1.61
SCFD1-208ENST00000553278 MRIQ9BWK5 157 aa5□□□□□ -1.61
SCFD1-208ENST00000553278 MAGT1Q9H0U3 335 aa5□□□□□ -1.61
SCFD1-208ENST00000553278 YY1AP1Q9H869 796 aa5□□□□□ -1.61
SCFD1-208ENST00000553278 MTHFD2LQ9H903 347 aaPredicted RBP5□□□□□ -1.61
SCFD1-208ENST00000553278 MED20Q9H944 212 aa5□□□□□ -1.61
SCFD1-208ENST00000553278 NMUR1Q9HB89 426 aa5□□□□□ -1.61
SCFD1-208ENST00000553278 NRN1Q9NPD7 142 aa5□□□□□ -1.61
SCFD1-208ENST00000553278 DDX18Q9NVP1 670 aaKnown RBP5□□□□□ -1.61
SCFD1-208ENST00000553278 KLK11Q9UBX7 282 aa5□□□□□ -1.61
SCFD1-208ENST00000553278 PURGQ9UJV8 347 aaKnown RBP5□□□□□ -1.61
SCFD1-208ENST00000553278 RPH3ALQ9UNE2 315 aa5□□□□□ -1.61
SCFD1-208ENST00000553278 GSTK1Q9Y2Q3 226 aa5□□□□□ -1.61
SCFD1-208ENST00000553278 SYNJ2O15056 1496 aa5□□□□□ -1.61
SCFD1-208ENST00000553278 STK36Q9NRP7 1315 aa4.99□□□□□ -1.61
SCFD1-208ENST00000553278 TRAV26-1A0A087WT03 109 aa4.99□□□□□ -1.61
SCFD1-208ENST00000553278 GLTPD2A6NH11 291 aa4.99□□□□□ -1.61
SCFD1-208ENST00000553278 A8MU76 341 aa4.99□□□□□ -1.61
SCFD1-208ENST00000553278 CYB561D2O14569 222 aa4.99□□□□□ -1.61
SCFD1-208ENST00000553278 IMPA2O14732 288 aa4.99□□□□□ -1.61
SCFD1-208ENST00000553278 FCMRO60667 390 aa4.99□□□□□ -1.61
SCFD1-208ENST00000553278 WBP4O75554 376 aaKnown RBP4.99□□□□□ -1.61
SCFD1-208ENST00000553278 MTRF1O75570 445 aaKnown RBP4.99□□□□□ -1.61
SCFD1-208ENST00000553278 ECDO95905 644 aaPredicted RBP4.99□□□□□ -1.61
SCFD1-208ENST00000553278 PNMTP11086 282 aa4.99□□□□□ -1.61
SCFD1-208ENST00000553278 MYOGP15173 224 aa4.99□□□□□ -1.61
SCFD1-208ENST00000553278 MARK3P27448 753 aa4.99□□□□□ -1.61
SCFD1-208ENST00000553278 RPL9P32969 192 aaKnown RBP4.99□□□□□ -1.61
SCFD1-208ENST00000553278 ID1P41134 155 aa4.99□□□□□ -1.61
SCFD1-208ENST00000553278 INHBEP58166 350 aa4.99□□□□□ -1.61
SCFD1-208ENST00000553278 SYPL1Q16563 259 aa4.99□□□□□ -1.61
SCFD1-208ENST00000553278 GDPD4Q6W3E5 623 aa4.99□□□□□ -1.61
SCFD1-208ENST00000553278 FAM228AQ86W67 206 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 106.3 ms