RNA–Protein interactions for RNA: ENST00000553265.5

PRKCH-204, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-204ENST00000553265 TRIM23P36406 574 aa5.84□□□□□ -1.47
PRKCH-204ENST00000553265 GARSP41250 739 aaKnown RBP5.84□□□□□ -1.47
PRKCH-204ENST00000553265 BMXP51813 675 aa5.84□□□□□ -1.47
PRKCH-204ENST00000553265 CASP9P55211 416 aa5.84□□□□□ -1.47
PRKCH-204ENST00000553265 CDH6P55285 790 aa5.84□□□□□ -1.47
PRKCH-204ENST00000553265 ACY1Q03154 408 aa5.84□□□□□ -1.47
PRKCH-204ENST00000553265 TUBB2AQ13885 445 aa5.84□□□□□ -1.47
PRKCH-204ENST00000553265 DPYSQ14117 519 aa5.84□□□□□ -1.47
PRKCH-204ENST00000553265 SIX1Q15475 284 aaPredicted RBP5.84□□□□□ -1.47
PRKCH-204ENST00000553265 CLPPQ16740 277 aaPredicted RBP5.84□□□□□ -1.47
PRKCH-204ENST00000553265 ANKRD20A8PQ5CZ79 823 aa5.84□□□□□ -1.47
PRKCH-204ENST00000553265 FBXO48Q5FWF7 155 aa5.84□□□□□ -1.47
PRKCH-204ENST00000553265 TFDP3Q5H9I0 405 aa5.84□□□□□ -1.47
PRKCH-204ENST00000553265 ASPHD1Q5U4P2 390 aa5.84□□□□□ -1.47
PRKCH-204ENST00000553265 BRAT1Q6PJG6 821 aa5.84□□□□□ -1.47
PRKCH-204ENST00000553265 DPPA4Q7L190 304 aa5.84□□□□□ -1.47
PRKCH-204ENST00000553265 GPSM1Q86YR5 675 aa5.84□□□□□ -1.47
PRKCH-204ENST00000553265 SLC13A5Q86YT5 568 aaPredicted RBP5.84□□□□□ -1.47
PRKCH-204ENST00000553265 CAMK1DQ8IU85 385 aa5.84□□□□□ -1.47
PRKCH-204ENST00000553265 SLC25A41Q8N5S1 370 aa5.84□□□□□ -1.47
PRKCH-204ENST00000553265 NPWQ8N729 165 aa5.84□□□□□ -1.47
PRKCH-204ENST00000553265 PQLC3Q8N755 202 aa5.84□□□□□ -1.47
PRKCH-204ENST00000553265 LINC00469Q8N7U9 141 aa5.84□□□□□ -1.47
PRKCH-204ENST00000553265 BMPERQ8N8U9 685 aa5.84□□□□□ -1.47
PRKCH-204ENST00000553265 PRSS3P2Q8NHM4 247 aa5.84□□□□□ -1.47
PRKCH-204ENST00000553265 TRAF3IP1Q8TDR0 691 aaPredicted RBP5.84□□□□□ -1.47
PRKCH-204ENST00000553265 HCAR2Q8TDS4 363 aa5.84□□□□□ -1.47
PRKCH-204ENST00000553265 SLC13A3Q8WWT9 602 aa5.84□□□□□ -1.47
PRKCH-204ENST00000553265 PATE1Q8WXA2 126 aa5.84□□□□□ -1.47
PRKCH-204ENST00000553265 KLHL29Q96CT2 875 aa5.84□□□□□ -1.47
PRKCH-204ENST00000553265 ATP6V1G3Q96LB4 118 aa5.84□□□□□ -1.47
PRKCH-204ENST00000553265 CSPG4P5Q96PW8 444 aa5.84□□□□□ -1.47
PRKCH-204ENST00000553265 CMKLR1Q99788 373 aa5.84□□□□□ -1.47
PRKCH-204ENST00000553265 SH3GL1Q99961 368 aa5.84□□□□□ -1.47
PRKCH-204ENST00000553265 ZNF670Q9BS34 389 aa5.84□□□□□ -1.47
PRKCH-204ENST00000553265 NAA11Q9BSU3 229 aaPredicted RBP5.84□□□□□ -1.47
PRKCH-204ENST00000553265 TUBB2BQ9BVA1 445 aa5.84□□□□□ -1.47
PRKCH-204ENST00000553265 KRTAP4-9Q9BYQ8 210 aa5.84□□□□□ -1.47
PRKCH-204ENST00000553265 OSBPL8Q9BZF1 889 aa5.84□□□□□ -1.47
PRKCH-204ENST00000553265 RIBC2Q9H4K1 309 aa5.84□□□□□ -1.47
PRKCH-204ENST00000553265 XKR8Q9H6D3 395 aa5.84□□□□□ -1.47
PRKCH-204ENST00000553265 WDR26Q9H7D7 661 aa5.84□□□□□ -1.47
PRKCH-204ENST00000553265 PNRC2Q9NPJ4 139 aaKnown RBP5.84□□□□□ -1.47
PRKCH-204ENST00000553265 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP5.84□□□□□ -1.47
PRKCH-204ENST00000553265 SPATS2LQ9NUQ6 558 aaKnown RBP5.84□□□□□ -1.47
PRKCH-204ENST00000553265 TRNAU1APQ9NX07 287 aaKnown RBP5.84□□□□□ -1.47
PRKCH-204ENST00000553265 IL20Q9NYY1 176 aa5.84□□□□□ -1.47
PRKCH-204ENST00000553265 SMARCAL1Q9NZC9 954 aa5.84□□□□□ -1.47
PRKCH-204ENST00000553265 TMEM9Q9P0T7 183 aa5.84□□□□□ -1.47
PRKCH-204ENST00000553265 RCOR3Q9P2K3 495 aaPredicted RBP5.84□□□□□ -1.47
PRKCH-204ENST00000553265 RNF14Q9UBS8 474 aa5.84□□□□□ -1.47
PRKCH-204ENST00000553265 CARD8Q9Y2G2 431 aa5.84□□□□□ -1.47
PRKCH-204ENST00000553265 J3KR12 359 aa5.83□□□□□ -1.48
PRKCH-204ENST00000553265 EEF2KO00418 725 aaKnown RBP5.83□□□□□ -1.48
PRKCH-204ENST00000553265 ANGPT2O15123 496 aa5.83□□□□□ -1.48
PRKCH-204ENST00000553265 DUX1O43812 170 aa5.83□□□□□ -1.48
PRKCH-204ENST00000553265 SOD1P00441 154 aa5.83□□□□□ -1.48
PRKCH-204ENST00000553265 TNFP01375 233 aa5.83□□□□□ -1.48
PRKCH-204ENST00000553265 FGGP02679 453 aa5.83□□□□□ -1.48
PRKCH-204ENST00000553265 FGF1P05230 155 aa5.83□□□□□ -1.48
PRKCH-204ENST00000553265 HOXC4P09017 264 aaPredicted RBP5.83□□□□□ -1.48
PRKCH-204ENST00000553265 COX7A2P14406 83 aa5.83□□□□□ -1.48
PRKCH-204ENST00000553265 CCNB1P14635 433 aa5.83□□□□□ -1.48
PRKCH-204ENST00000553265 ERCC2P18074 760 aa5.83□□□□□ -1.48
PRKCH-204ENST00000553265 LHCGRP22888 699 aa5.83□□□□□ -1.48
PRKCH-204ENST00000553265 POU1F1P28069 291 aa5.83□□□□□ -1.48
PRKCH-204ENST00000553265 CD1CP29017 333 aa5.83□□□□□ -1.48
PRKCH-204ENST00000553265 UGT1A3P35503 534 aa5.83□□□□□ -1.48
PRKCH-204ENST00000553265 CETN2P41208 172 aa5.83□□□□□ -1.48
PRKCH-204ENST00000553265 LIMK2P53671 638 aa5.83□□□□□ -1.48
PRKCH-204ENST00000553265 OR1D5P58170 312 aa5.83□□□□□ -1.48
PRKCH-204ENST00000553265 TPI1P60174 286 aa5.83□□□□□ -1.48
PRKCH-204ENST00000553265 STX1BP61266 288 aa5.83□□□□□ -1.48
PRKCH-204ENST00000553265 PRAMEP78395 509 aa5.83□□□□□ -1.48
PRKCH-204ENST00000553265 RAD51Q06609 339 aa5.83□□□□□ -1.48
PRKCH-204ENST00000553265 CHIT1Q13231 466 aa5.83□□□□□ -1.48
PRKCH-204ENST00000553265 KRT81Q14533 505 aa5.83□□□□□ -1.48
PRKCH-204ENST00000553265 WHAMMP3Q1A5X7 153 aa5.83□□□□□ -1.48
PRKCH-204ENST00000553265 AMZ1Q400G9 498 aa5.83□□□□□ -1.48
PRKCH-204ENST00000553265 ANKRD20A4Q4UJ75 823 aa5.83□□□□□ -1.48
PRKCH-204ENST00000553265 PPP6R3Q5H9R7 873 aaPredicted RBP5.83□□□□□ -1.48
PRKCH-204ENST00000553265 MTX3Q5HYI7 312 aa5.83□□□□□ -1.48
PRKCH-204ENST00000553265 ANKRD20A2Q5SQ80 823 aa5.83□□□□□ -1.48
PRKCH-204ENST00000553265 PIK3CD-AS1Q5SR53 167 aa5.83□□□□□ -1.48
PRKCH-204ENST00000553265 SEL1L2Q5TEA6 688 aa5.83□□□□□ -1.48
PRKCH-204ENST00000553265 ANKRD20A1Q5TYW2 823 aa5.83□□□□□ -1.48
PRKCH-204ENST00000553265 ANKRD20A3Q5VUR7 823 aa5.83□□□□□ -1.48
PRKCH-204ENST00000553265 SUSD1Q6UWL2 747 aa5.83□□□□□ -1.48
PRKCH-204ENST00000553265 MARK2Q7KZI7 788 aaKnown RBP5.83□□□□□ -1.48
PRKCH-204ENST00000553265 PRSS45Q7RTY3 260 aa5.83□□□□□ -1.48
PRKCH-204ENST00000553265 GPAT4Q86UL3 456 aa5.83□□□□□ -1.48
PRKCH-204ENST00000553265 CCDC50Q8IVM0 306 aa5.83□□□□□ -1.48
PRKCH-204ENST00000553265 MAP7D3Q8IWC1 876 aa5.83□□□□□ -1.48
PRKCH-204ENST00000553265 DENND6AQ8IWF6 608 aa5.83□□□□□ -1.48
PRKCH-204ENST00000553265 CNTN4Q8IWV2 1026 aa5.83□□□□□ -1.48
PRKCH-204ENST00000553265 ARHGAP12Q8IWW6 846 aa5.83□□□□□ -1.48
PRKCH-204ENST00000553265 THRSPQ92748 146 aa5.83□□□□□ -1.48
PRKCH-204ENST00000553265 ART4Q93070 314 aa5.83□□□□□ -1.48
PRKCH-204ENST00000553265 SPACA9Q96E40 222 aaPredicted RBP5.83□□□□□ -1.48
PRKCH-204ENST00000553265 CELF6Q96J87 481 aaKnown RBP5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms