RNA–Protein interactions for RNA: ENST00000552828.5

CKAP4-202, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 3

Gene CKAP4, Length 831 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-202ENST00000552828 ZCCHC7Q8N3Z6 543 aaKnown RBP10.87□□□□□ -0.67
CKAP4-202ENST00000552828 NAXEQ8NCW5 288 aa10.87□□□□□ -0.67
CKAP4-202ENST00000552828 OR10G3Q8NGC4 313 aa10.87□□□□□ -0.67
CKAP4-202ENST00000552828 WDR20Q8TBZ3 569 aa10.87□□□□□ -0.67
CKAP4-202ENST00000552828 RNASE6Q93091 150 aaKnown RBP10.87□□□□□ -0.67
CKAP4-202ENST00000552828 RGMAQ96B86 450 aa10.87□□□□□ -0.67
CKAP4-202ENST00000552828 PPWD1Q96BP3 646 aaKnown RBP10.87□□□□□ -0.67
CKAP4-202ENST00000552828 ZBTB9Q96C00 473 aa10.87□□□□□ -0.67
CKAP4-202ENST00000552828 OR51B5Q9H339 312 aa10.87□□□□□ -0.67
CKAP4-202ENST00000552828 GSTO2Q9H4Y5 243 aa10.87□□□□□ -0.67
CKAP4-202ENST00000552828 SSU72Q9NP77 194 aaKnown RBP10.87□□□□□ -0.67
CKAP4-202ENST00000552828 SLC17A7Q9P2U7 560 aa10.87□□□□□ -0.67
CKAP4-202ENST00000552828 TRPS1Q9UHF7 1281 aa10.87□□□□□ -0.67
CKAP4-202ENST00000552828 FOXD3Q9UJU5 478 aaPredicted RBP10.87□□□□□ -0.67
CKAP4-202ENST00000552828 PRDM4Q9UKN5 801 aa10.87□□□□□ -0.67
CKAP4-202ENST00000552828 SNX6Q9UNH7 406 aa10.87□□□□□ -0.67
CKAP4-202ENST00000552828 ACTL7BQ9Y614 415 aa10.87□□□□□ -0.67
CKAP4-202ENST00000552828 A0A1B0GTL3 188 aa10.86□□□□□ -0.67
CKAP4-202ENST00000552828 OR6C76A6NM76 312 aa10.86□□□□□ -0.67
CKAP4-202ENST00000552828 H3BQF6 201 aa10.86□□□□□ -0.67
CKAP4-202ENST00000552828 SAP18O00422 153 aaKnown RBP10.86□□□□□ -0.67
CKAP4-202ENST00000552828 DVL2O14641 736 aa10.86□□□□□ -0.67
CKAP4-202ENST00000552828 TYROBPO43914 113 aa10.86□□□□□ -0.67
CKAP4-202ENST00000552828 TRIM13O60858 407 aa10.86□□□□□ -0.67
CKAP4-202ENST00000552828 OR4F21O95013 312 aa10.86□□□□□ -0.67
CKAP4-202ENST00000552828 ESRRBO95718 433 aa10.86□□□□□ -0.67
CKAP4-202ENST00000552828 GPR75O95800 540 aa10.86□□□□□ -0.67
CKAP4-202ENST00000552828 KRT6AP02538 564 aa10.86□□□□□ -0.67
CKAP4-202ENST00000552828 CLPSP04118 112 aa10.86□□□□□ -0.67
CKAP4-202ENST00000552828 KRT6BP04259 564 aa10.86□□□□□ -0.67
CKAP4-202ENST00000552828 ENO1P06733 434 aaKnown RBP10.86□□□□□ -0.67
CKAP4-202ENST00000552828 ALOX15P16050 662 aaPredicted RBP10.86□□□□□ -0.67
CKAP4-202ENST00000552828 TLX1P31314 330 aaPredicted RBP10.86□□□□□ -0.67
CKAP4-202ENST00000552828 UQCRC1P31930 480 aa10.86□□□□□ -0.67
CKAP4-202ENST00000552828 KRT6CP48668 564 aa10.86□□□□□ -0.67
CKAP4-202ENST00000552828 RAP1GDS1P52306 607 aa10.86□□□□□ -0.67
CKAP4-202ENST00000552828 SLC37A1P57057 533 aa10.86□□□□□ -0.67
CKAP4-202ENST00000552828 TNFRSF17Q02223 184 aa10.86□□□□□ -0.67
CKAP4-202ENST00000552828 CRYZQ08257 329 aaKnown RBP10.86□□□□□ -0.67
CKAP4-202ENST00000552828 FOXD4Q12950 439 aaPredicted RBP10.86□□□□□ -0.67
CKAP4-202ENST00000552828 CUL3Q13618 768 aa10.86□□□□□ -0.67
CKAP4-202ENST00000552828 SNTB1Q13884 538 aaKnown RBP10.86□□□□□ -0.67
CKAP4-202ENST00000552828 PCLAFQ15004 111 aa10.86□□□□□ -0.67
CKAP4-202ENST00000552828 ACSF3Q4G176 576 aaPredicted RBP10.86□□□□□ -0.67
CKAP4-202ENST00000552828 SGO1Q5FBB7 561 aa10.86□□□□□ -0.67
CKAP4-202ENST00000552828 TNFAIP8L3Q5GJ75 292 aa10.86□□□□□ -0.67
CKAP4-202ENST00000552828 TBCELQ5QJ74 424 aa10.86□□□□□ -0.67
CKAP4-202ENST00000552828 PRAMEF20Q5VT98 475 aa10.86□□□□□ -0.67
CKAP4-202ENST00000552828 FRMD7Q6ZUT3 714 aa10.86□□□□□ -0.67
CKAP4-202ENST00000552828 LACC1Q8IV20 430 aa10.86□□□□□ -0.67
CKAP4-202ENST00000552828 RNF175Q8N4F7 328 aa10.86□□□□□ -0.67
CKAP4-202ENST00000552828 CDYL2Q8N8U2 506 aa10.86□□□□□ -0.67
CKAP4-202ENST00000552828 ZNF441Q8N8Z8 693 aa10.86□□□□□ -0.67
CKAP4-202ENST00000552828 TNIP2Q8NFZ5 429 aa10.86□□□□□ -0.67
CKAP4-202ENST00000552828 METTL6Q8TCB7 284 aa10.86□□□□□ -0.67
CKAP4-202ENST00000552828 SELENOMQ8WWX9 145 aa10.86□□□□□ -0.67
CKAP4-202ENST00000552828 NTNG2Q96CW9 530 aa10.86□□□□□ -0.67
CKAP4-202ENST00000552828 LRRC46Q96FV0 321 aa10.86□□□□□ -0.67
CKAP4-202ENST00000552828 SERPINI1Q99574 410 aa10.86□□□□□ -0.67
CKAP4-202ENST00000552828 TIMP4Q99727 224 aa10.86□□□□□ -0.67
CKAP4-202ENST00000552828 PELOQ9BRX2 385 aaKnown RBP10.86□□□□□ -0.67
CKAP4-202ENST00000552828 SORBS1Q9BX66 1292 aaKnown RBP10.86□□□□□ -0.67
CKAP4-202ENST00000552828 WWTR1Q9GZV5 400 aa10.86□□□□□ -0.67
CKAP4-202ENST00000552828 PRDM14Q9GZV8 571 aa10.86□□□□□ -0.67
CKAP4-202ENST00000552828 SLC6A15Q9H2J7 730 aa10.86□□□□□ -0.67
CKAP4-202ENST00000552828 UBQLN3Q9H347 655 aa10.86□□□□□ -0.67
CKAP4-202ENST00000552828 MID1IP1Q9NPA3 183 aa10.86□□□□□ -0.67
CKAP4-202ENST00000552828 PHF11Q9UIL8 331 aa10.86□□□□□ -0.67
CKAP4-202ENST00000552828 ZNF225Q9UK10 706 aa10.86□□□□□ -0.67
CKAP4-202ENST00000552828 CBLCQ9ULV8 474 aa10.86□□□□□ -0.67
CKAP4-202ENST00000552828 PLEKHA6Q9Y2H5 1048 aa10.86□□□□□ -0.67
CKAP4-202ENST00000552828 NSD1Q96L73 2696 aaPredicted RBP10.85□□□□□ -0.67
CKAP4-202ENST00000552828 KDM4EB2RXH2 506 aaPredicted RBP10.85□□□□□ -0.67
CKAP4-202ENST00000552828 PLPP1O14494 284 aa10.85□□□□□ -0.67
CKAP4-202ENST00000552828 ULK1O75385 1050 aa10.85□□□□□ -0.67
CKAP4-202ENST00000552828 HPNP05981 417 aa10.85□□□□□ -0.67
CKAP4-202ENST00000552828 BMP5P22003 454 aa10.85□□□□□ -0.67
CKAP4-202ENST00000552828 HMOX2P30519 316 aa10.85□□□□□ -0.67
CKAP4-202ENST00000552828 ALDH3A1P30838 453 aa10.85□□□□□ -0.67
CKAP4-202ENST00000552828 ERVK-8P63133 956 aa10.85□□□□□ -0.67
CKAP4-202ENST00000552828 ADAM8P78325 824 aa10.85□□□□□ -0.67
CKAP4-202ENST00000552828 DUSP8Q13202 625 aa10.85□□□□□ -0.67
CKAP4-202ENST00000552828 EBPQ15125 230 aaKnown RBP10.85□□□□□ -0.67
CKAP4-202ENST00000552828 NHSL2Q5HYW2 709 aa10.85□□□□□ -0.67
CKAP4-202ENST00000552828 C18orf63Q68DL7 685 aa10.85□□□□□ -0.67
CKAP4-202ENST00000552828 MRM1Q6IN84 353 aaKnown RBP10.85□□□□□ -0.67
CKAP4-202ENST00000552828 PAMR1Q6UXH9 720 aa10.85□□□□□ -0.67
CKAP4-202ENST00000552828 RNF111Q6ZNA4 994 aa10.85□□□□□ -0.67
CKAP4-202ENST00000552828 SLC29A4Q7RTT9 530 aa10.85□□□□□ -0.67
CKAP4-202ENST00000552828 LIX1Q8N485 282 aa10.85□□□□□ -0.67
CKAP4-202ENST00000552828 FAM13CQ8NE31 585 aa10.85□□□□□ -0.67
CKAP4-202ENST00000552828 GOT1L1Q8NHS2 421 aaPredicted RBP10.85□□□□□ -0.67
CKAP4-202ENST00000552828 RIT1Q92963 219 aa10.85□□□□□ -0.67
CKAP4-202ENST00000552828 TP53INP1Q96A56 240 aa10.85□□□□□ -0.67
CKAP4-202ENST00000552828 SECISBP2Q96T21 854 aaKnown RBP10.85□□□□□ -0.67
CKAP4-202ENST00000552828 TRMOQ9BU70 441 aa10.85□□□□□ -0.67
CKAP4-202ENST00000552828 DOHHQ9BU89 302 aa10.85□□□□□ -0.67
CKAP4-202ENST00000552828 GATA5Q9BWX5 397 aaPredicted RBP10.85□□□□□ -0.67
CKAP4-202ENST00000552828 ZNF717Q9BY31 904 aaPredicted RBP10.85□□□□□ -0.67
CKAP4-202ENST00000552828 BRF2Q9HAW0 419 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms