RNA–Protein interactions for RNA: ENST00000552000.2

HOXB3-213, Transcript of homeobox B3, humanhuman

TSL 3

Gene HOXB3, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-213ENST00000552000 SLC29A4Q7RTT9 530 aa4.85□□□□□ -1.63
HOXB3-213ENST00000552000 P4HA3Q7Z4N8 544 aa4.85□□□□□ -1.63
HOXB3-213ENST00000552000 THOC6Q86W42 341 aaKnown RBP4.85□□□□□ -1.63
HOXB3-213ENST00000552000 RELL1Q8IUW5 271 aa4.85□□□□□ -1.63
HOXB3-213ENST00000552000 VSTM4Q8IW00 320 aa4.85□□□□□ -1.63
HOXB3-213ENST00000552000 ZNF611Q8N823 705 aa4.85□□□□□ -1.63
HOXB3-213ENST00000552000 GPATCH11Q8N954 259 aa4.85□□□□□ -1.63
HOXB3-213ENST00000552000 LRRC57Q8N9N7 239 aa4.85□□□□□ -1.63
HOXB3-213ENST00000552000 OR2L5Q8NG80 312 aa4.85□□□□□ -1.63
HOXB3-213ENST00000552000 RDH11Q8TC12 318 aa4.85□□□□□ -1.63
HOXB3-213ENST00000552000 SPPL2AQ8TCT8 520 aa4.85□□□□□ -1.63
HOXB3-213ENST00000552000 PPWD1Q96BP3 646 aaKnown RBP4.85□□□□□ -1.63
HOXB3-213ENST00000552000 ZNF669Q96BR6 464 aaPredicted RBP4.85□□□□□ -1.63
HOXB3-213ENST00000552000 FBXL8Q96CD0 374 aa4.85□□□□□ -1.63
HOXB3-213ENST00000552000 STARD4Q96DR4 205 aa4.85□□□□□ -1.63
HOXB3-213ENST00000552000 LINGO1Q96FE5 620 aa4.85□□□□□ -1.63
HOXB3-213ENST00000552000 TRMT61AQ96FX7 289 aaKnown RBP4.85□□□□□ -1.63
HOXB3-213ENST00000552000 PGM2Q96G03 612 aa4.85□□□□□ -1.63
HOXB3-213ENST00000552000 DGAT2Q96PD7 388 aa4.85□□□□□ -1.63
HOXB3-213ENST00000552000 FANCD2OSQ96PS1 177 aa4.85□□□□□ -1.63
HOXB3-213ENST00000552000 SERINC2Q96SA4 455 aa4.85□□□□□ -1.63
HOXB3-213ENST00000552000 KRT12Q99456 494 aa4.85□□□□□ -1.63
HOXB3-213ENST00000552000 NDNQ99608 321 aa4.85□□□□□ -1.63
HOXB3-213ENST00000552000 MAPKAP1Q9BPZ7 522 aa4.85□□□□□ -1.63
HOXB3-213ENST00000552000 SLC39A3Q9BRY0 314 aa4.85□□□□□ -1.63
HOXB3-213ENST00000552000 G6PC3Q9BUM1 346 aa4.85□□□□□ -1.63
HOXB3-213ENST00000552000 TRIM54Q9BYV2 358 aa4.85□□□□□ -1.63
HOXB3-213ENST00000552000 KLHL4Q9C0H6 718 aa4.85□□□□□ -1.63
HOXB3-213ENST00000552000 WWTR1Q9GZV5 400 aa4.85□□□□□ -1.63
HOXB3-213ENST00000552000 SHARPINQ9H0F6 387 aa4.85□□□□□ -1.63
HOXB3-213ENST00000552000 LIN7BQ9HAP6 207 aa4.85□□□□□ -1.63
HOXB3-213ENST00000552000 SSU72Q9NP77 194 aaKnown RBP4.85□□□□□ -1.63
HOXB3-213ENST00000552000 SERHLQ9NQF3 203 aa4.85□□□□□ -1.63
HOXB3-213ENST00000552000 HEY2Q9UBP5 337 aa4.85□□□□□ -1.63
HOXB3-213ENST00000552000 DTX4Q9Y2E6 619 aa4.85□□□□□ -1.63
HOXB3-213ENST00000552000 MAD1L1Q9Y6D9 718 aa4.85□□□□□ -1.63
HOXB3-213ENST00000552000 IKBKGQ9Y6K9 419 aa4.85□□□□□ -1.63
HOXB3-213ENST00000552000 NOTCH3Q9UM47 2321 aa4.85□□□□□ -1.63
HOXB3-213ENST00000552000 IGHV4-30-2A0A087WSY4 118 aa4.84□□□□□ -1.63
HOXB3-213ENST00000552000 IQANK1A0A1B0GTG1 560 aa4.84□□□□□ -1.63
HOXB3-213ENST00000552000 GRID2IPA4D2P6 1211 aa4.84□□□□□ -1.63
HOXB3-213ENST00000552000 FRG2CA6NGY1 282 aa4.84□□□□□ -1.63
HOXB3-213ENST00000552000 LRRC14BA6NHZ5 514 aa4.84□□□□□ -1.63
HOXB3-213ENST00000552000 GOLGA6L22H0YM25 854 aa4.84□□□□□ -1.63
HOXB3-213ENST00000552000 OVOL3O00110 214 aa4.84□□□□□ -1.63
HOXB3-213ENST00000552000 AP3B1O00203 1094 aa4.84□□□□□ -1.63
HOXB3-213ENST00000552000 CDC7O00311 574 aa4.84□□□□□ -1.63
HOXB3-213ENST00000552000 NDUFS7O75251 213 aa4.84□□□□□ -1.63
HOXB3-213ENST00000552000 H2AFYO75367 372 aaKnown RBP4.84□□□□□ -1.63
HOXB3-213ENST00000552000 TBX6O95947 436 aaPredicted RBP4.84□□□□□ -1.63
HOXB3-213ENST00000552000 FTCDO95954 541 aa4.84□□□□□ -1.63
HOXB3-213ENST00000552000 IGHV4-39P01824 125 aa4.84□□□□□ -1.63
HOXB3-213ENST00000552000 CRHP06850 196 aa4.84□□□□□ -1.63
HOXB3-213ENST00000552000 SOD3P08294 240 aa4.84□□□□□ -1.63
HOXB3-213ENST00000552000 TBXA2RP21731 343 aa4.84□□□□□ -1.63
HOXB3-213ENST00000552000 TCEA1P23193 301 aaKnown RBP4.84□□□□□ -1.63
HOXB3-213ENST00000552000 CHMP24386 653 aa4.84□□□□□ -1.63
HOXB3-213ENST00000552000 STT3AP46977 705 aa4.84□□□□□ -1.63
HOXB3-213ENST00000552000 PCYT1AP49585 367 aa4.84□□□□□ -1.63
HOXB3-213ENST00000552000 PGGT1BP53609 377 aa4.84□□□□□ -1.63
HOXB3-213ENST00000552000 CDKN2DP55273 166 aa4.84□□□□□ -1.63
HOXB3-213ENST00000552000 AP1S2P56377 157 aa4.84□□□□□ -1.63
HOXB3-213ENST00000552000 HERVK_113P63132 956 aa4.84□□□□□ -1.63
HOXB3-213ENST00000552000 ERVK-8P63133 956 aa4.84□□□□□ -1.63
HOXB3-213ENST00000552000 SLBPQ14493 270 aaKnown RBP eCLIP4.84□□□□□ -1.63
HOXB3-213ENST00000552000 EBPQ15125 230 aaKnown RBP4.84□□□□□ -1.63
HOXB3-213ENST00000552000 SPA17Q15506 151 aa4.84□□□□□ -1.63
HOXB3-213ENST00000552000 EXOC3L2Q2M3D2 409 aa4.84□□□□□ -1.63
HOXB3-213ENST00000552000 SPRED3Q2MJR0 410 aa4.84□□□□□ -1.63
HOXB3-213ENST00000552000 TMEM249Q2WGJ8 235 aa4.84□□□□□ -1.63
HOXB3-213ENST00000552000 RBM20Q5T481 1227 aaKnown RBP4.84□□□□□ -1.63
HOXB3-213ENST00000552000 TIGD3Q6B0B8 471 aa4.84□□□□□ -1.63
HOXB3-213ENST00000552000 ADNP2Q6IQ32 1131 aa4.84□□□□□ -1.63
HOXB3-213ENST00000552000 TRIM40Q6P9F5 258 aa4.84□□□□□ -1.63
HOXB3-213ENST00000552000 BHLHB9Q6PI77 547 aa4.84□□□□□ -1.63
HOXB3-213ENST00000552000 SCIMPQ6UWF3 145 aa4.84□□□□□ -1.63
HOXB3-213ENST00000552000 ENPP6Q6UWR7 440 aa4.84□□□□□ -1.63
HOXB3-213ENST00000552000 ANGPTL8Q6UXH0 198 aa4.84□□□□□ -1.63
HOXB3-213ENST00000552000 TMIGD1Q6UXZ0 262 aa4.84□□□□□ -1.63
HOXB3-213ENST00000552000 ZNF793Q6ZN11 406 aa4.84□□□□□ -1.63
HOXB3-213ENST00000552000 RNF111Q6ZNA4 994 aa4.84□□□□□ -1.63
HOXB3-213ENST00000552000 SH2D5Q6ZV89 423 aa4.84□□□□□ -1.63
HOXB3-213ENST00000552000 IL17RELQ6ZVW7 336 aa4.84□□□□□ -1.63
HOXB3-213ENST00000552000 PEX26Q7Z412 305 aa4.84□□□□□ -1.63
HOXB3-213ENST00000552000 CNGA4Q8IV77 575 aa4.84□□□□□ -1.63
HOXB3-213ENST00000552000 PRR22Q8IZ63 422 aa4.84□□□□□ -1.63
HOXB3-213ENST00000552000 TAGAPQ8N103 731 aa4.84□□□□□ -1.63
HOXB3-213ENST00000552000 UBL4BQ8N7F7 174 aa4.84□□□□□ -1.63
HOXB3-213ENST00000552000 ARIH2OSQ8N7S6 290 aa4.84□□□□□ -1.63
HOXB3-213ENST00000552000 TTLQ8NG68 377 aa4.84□□□□□ -1.63
HOXB3-213ENST00000552000 OR1J4Q8NGS1 313 aa4.84□□□□□ -1.63
HOXB3-213ENST00000552000 OR14L1PQ8NHC6 308 aa4.84□□□□□ -1.63
HOXB3-213ENST00000552000 AKAP1Q92667 903 aaKnown RBP eCLIP4.84□□□□□ -1.63
HOXB3-213ENST00000552000 CAVIN3Q969G5 261 aa4.84□□□□□ -1.63
HOXB3-213ENST00000552000 CTHRC1Q96CG8 243 aa4.84□□□□□ -1.63
HOXB3-213ENST00000552000 PLPPR2Q96GM1 343 aa4.84□□□□□ -1.63
HOXB3-213ENST00000552000 RBM18Q96H35 190 aaKnown RBP4.84□□□□□ -1.63
HOXB3-213ENST00000552000 TMEM41AQ96HV5 264 aa4.84□□□□□ -1.63
HOXB3-213ENST00000552000 FBXL20Q96IG2 436 aa4.84□□□□□ -1.63
HOXB3-213ENST00000552000 ZNF845Q96IR2 970 aaPredicted RBP4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms