RNA–Protein interactions for RNA: ENST00000551716.5

CACNB3-220, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 544 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-220ENST00000551716 SHARPINQ9H0F6 387 aa13.79□□□□□ -0.2
CACNB3-220ENST00000551716 RNF122Q9H9V4 155 aa13.79□□□□□ -0.2
CACNB3-220ENST00000551716 LYARQ9NX58 379 aaKnown RBP13.79□□□□□ -0.2
CACNB3-220ENST00000551716 ZNF175Q9Y473 711 aa13.79□□□□□ -0.2
CACNB3-220ENST00000551716 MED12Q93074 2177 aa13.78□□□□□ -0.2
CACNB3-220ENST00000551716 C2orf72A6NCS6 295 aa13.78□□□□□ -0.2
CACNB3-220ENST00000551716 NCF1BA6NI72 391 aaPredicted RBP13.78□□□□□ -0.2
CACNB3-220ENST00000551716 NCF1CA8MVU1 366 aaPredicted RBP13.78□□□□□ -0.2
CACNB3-220ENST00000551716 ACOX3O15254 700 aa13.78□□□□□ -0.2
CACNB3-220ENST00000551716 PRAMEF4O60810 478 aa13.78□□□□□ -0.2
CACNB3-220ENST00000551716 AIFM1O95831 613 aa13.78□□□□□ -0.2
CACNB3-220ENST00000551716 NCF1P14598 390 aaPredicted RBP13.78□□□□□ -0.2
CACNB3-220ENST00000551716 CD22P20273 847 aa13.78□□□□□ -0.2
CACNB3-220ENST00000551716 CHIT1Q13231 466 aa13.78□□□□□ -0.2
CACNB3-220ENST00000551716 PRAMEF9Q5VWM5 478 aa13.78□□□□□ -0.2
CACNB3-220ENST00000551716 LAS2Q8IYD9 372 aa13.78□□□□□ -0.2
CACNB3-220ENST00000551716 PIAS4Q8N2W9 510 aaPredicted RBP13.78□□□□□ -0.2
CACNB3-220ENST00000551716 NAT8LQ8N9F0 302 aa13.78□□□□□ -0.2
CACNB3-220ENST00000551716 RNF214Q8ND24 703 aa13.78□□□□□ -0.2
CACNB3-220ENST00000551716 ROBO4Q8WZ75 1007 aa13.78□□□□□ -0.2
CACNB3-220ENST00000551716 HGDQ93099 445 aa13.78□□□□□ -0.2
CACNB3-220ENST00000551716 FBXW5Q969U6 566 aa13.78□□□□□ -0.2
CACNB3-220ENST00000551716 TMCO6Q96DC7 493 aa13.78□□□□□ -0.2
CACNB3-220ENST00000551716 HS6ST2Q96MM7 605 aa13.78□□□□□ -0.2
CACNB3-220ENST00000551716 OR10A4Q9H209 315 aa13.78□□□□□ -0.2
CACNB3-220ENST00000551716 TSPY26PQ9H489 355 aa13.78□□□□□ -0.2
CACNB3-220ENST00000551716 GALNT9Q9HCQ5 603 aa13.78□□□□□ -0.2
CACNB3-220ENST00000551716 UQCRHLA0A096LP55 91 aa13.77□□□□□ -0.21
CACNB3-220ENST00000551716 PRAMEF25A6NGN4 478 aa13.77□□□□□ -0.21
CACNB3-220ENST00000551716 LINC01387J3KSC0 135 aa13.77□□□□□ -0.21
CACNB3-220ENST00000551716 SAP18O00422 153 aaKnown RBP13.77□□□□□ -0.21
CACNB3-220ENST00000551716 TAPBPO15533 448 aa13.77□□□□□ -0.21
CACNB3-220ENST00000551716 DLX3O60479 287 aa13.77□□□□□ -0.21
CACNB3-220ENST00000551716 SH3BGRLO75368 114 aa13.77□□□□□ -0.21
CACNB3-220ENST00000551716 NR2F6P10588 404 aa13.77□□□□□ -0.21
CACNB3-220ENST00000551716 PCNAP12004 261 aa13.77□□□□□ -0.21
CACNB3-220ENST00000551716 PIK3R1P27986 724 aa13.77□□□□□ -0.21
CACNB3-220ENST00000551716 PTGDSP41222 190 aa13.77□□□□□ -0.21
CACNB3-220ENST00000551716 HNRNPH2P55795 449 aaKnown RBP13.77□□□□□ -0.21
CACNB3-220ENST00000551716 EXOC3L2Q2M3D2 409 aa13.77□□□□□ -0.21
CACNB3-220ENST00000551716 LIPNQ5VXI9 398 aa13.77□□□□□ -0.21
CACNB3-220ENST00000551716 CYP20A1Q6UW02 462 aa13.77□□□□□ -0.21
CACNB3-220ENST00000551716 DNAJC14Q6Y2X3 702 aaPredicted RBP13.77□□□□□ -0.21
CACNB3-220ENST00000551716 FAM214BQ7L5A3 538 aa13.77□□□□□ -0.21
CACNB3-220ENST00000551716 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.77□□□□□ -0.21
CACNB3-220ENST00000551716 HEATR5AQ86XA9 2040 aa13.77□□□□□ -0.21
CACNB3-220ENST00000551716 PPIL6Q8IXY8 311 aa13.77□□□□□ -0.21
CACNB3-220ENST00000551716 OR7G3Q8NG95 312 aa13.77□□□□□ -0.21
CACNB3-220ENST00000551716 SMAP2Q8WU79 429 aaPredicted RBP13.77□□□□□ -0.21
CACNB3-220ENST00000551716 NODALQ96S42 347 aa13.77□□□□□ -0.21
CACNB3-220ENST00000551716 NXF5Q9H1B4 397 aaKnown RBP13.77□□□□□ -0.21
CACNB3-220ENST00000551716 OR51B5Q9H339 312 aa13.77□□□□□ -0.21
CACNB3-220ENST00000551716 NGBQ9NPG2 151 aa13.77□□□□□ -0.21
CACNB3-220ENST00000551716 PLSCR4Q9NRQ2 329 aa13.77□□□□□ -0.21
CACNB3-220ENST00000551716 HEY2Q9UBP5 337 aa13.77□□□□□ -0.21
CACNB3-220ENST00000551716 DKKL1Q9UK85 242 aa13.77□□□□□ -0.21
CACNB3-220ENST00000551716 LIPT1Q9Y234 373 aa13.77□□□□□ -0.21
CACNB3-220ENST00000551716 SNX8Q9Y5X2 465 aa13.77□□□□□ -0.21
CACNB3-220ENST00000551716 GLOD5A6NK44 160 aa13.76□□□□□ -0.21
CACNB3-220ENST00000551716 ZIC3O60481 467 aa13.76□□□□□ -0.21
CACNB3-220ENST00000551716 ADAM11O75078 769 aa13.76□□□□□ -0.21
CACNB3-220ENST00000551716 THBS1P07996 1170 aa13.76□□□□□ -0.21
CACNB3-220ENST00000551716 DANCRP0C864 163 aa13.76□□□□□ -0.21
CACNB3-220ENST00000551716 FCGR2AP12318 317 aa13.76□□□□□ -0.21
CACNB3-220ENST00000551716 GPX3P22352 226 aa13.76□□□□□ -0.21
CACNB3-220ENST00000551716 PTX3P26022 381 aaPredicted RBP13.76□□□□□ -0.21
CACNB3-220ENST00000551716 DEKP35659 375 aaKnown RBP13.76□□□□□ -0.21
CACNB3-220ENST00000551716 PIK3CBP42338 1070 aa13.76□□□□□ -0.21
CACNB3-220ENST00000551716 HSPA7P48741 367 aa13.76□□□□□ -0.21
CACNB3-220ENST00000551716 DSCR9P59020 149 aa13.76□□□□□ -0.21
CACNB3-220ENST00000551716 HMGCS1Q01581 520 aa13.76□□□□□ -0.21
CACNB3-220ENST00000551716 PLCXD2Q0VAA5 305 aa13.76□□□□□ -0.21
CACNB3-220ENST00000551716 ILF2Q12905 390 aaKnown RBP13.76□□□□□ -0.21
CACNB3-220ENST00000551716 E2F2Q14209 437 aa13.76□□□□□ -0.21
CACNB3-220ENST00000551716 KCTD19Q17RG1 926 aaPredicted RBP13.76□□□□□ -0.21
CACNB3-220ENST00000551716 GPSM1Q86YR5 675 aa13.76□□□□□ -0.21
CACNB3-220ENST00000551716 WFDC8Q8IUA0 241 aa13.76□□□□□ -0.21
CACNB3-220ENST00000551716 FIG4Q92562 907 aa13.76□□□□□ -0.21
CACNB3-220ENST00000551716 OMA1Q96E52 524 aa13.76□□□□□ -0.21
CACNB3-220ENST00000551716 LCORQ96JN0 433 aaPredicted RBP13.76□□□□□ -0.21
CACNB3-220ENST00000551716 TNFRSF13CQ96RJ3 184 aa13.76□□□□□ -0.21
CACNB3-220ENST00000551716 TMEM79Q9BSE2 394 aa13.76□□□□□ -0.21
CACNB3-220ENST00000551716 TACO1Q9BSH4 297 aaKnown RBP13.76□□□□□ -0.21
CACNB3-220ENST00000551716 SORBS1Q9BX66 1292 aaKnown RBP13.76□□□□□ -0.21
CACNB3-220ENST00000551716 GPR52Q9Y2T5 361 aa13.76□□□□□ -0.21
CACNB3-220ENST00000551716 RNF115Q9Y4L5 304 aa13.76□□□□□ -0.21
CACNB3-220ENST00000551716 ASB4Q9Y574 426 aa13.76□□□□□ -0.21
CACNB3-220ENST00000551716 A0A1W2PR48 441 aa13.75□□□□□ -0.21
CACNB3-220ENST00000551716 WASHC1A8K0Z3 465 aa13.75□□□□□ -0.21
CACNB3-220ENST00000551716 PRKRAO75569 313 aaKnown RBP13.75□□□□□ -0.21
CACNB3-220ENST00000551716 IGHV4-39P01824 125 aa13.75□□□□□ -0.21
CACNB3-220ENST00000551716 SOD3P08294 240 aa13.75□□□□□ -0.21
CACNB3-220ENST00000551716 FAM58BPP0C7Q3 252 aa13.75□□□□□ -0.21
CACNB3-220ENST00000551716 PYGBP11216 843 aa13.75□□□□□ -0.21
CACNB3-220ENST00000551716 DPP4P27487 766 aa13.75□□□□□ -0.21
CACNB3-220ENST00000551716 NEK2P51955 445 aa13.75□□□□□ -0.21
CACNB3-220ENST00000551716 VLDLRP98155 873 aa13.75□□□□□ -0.21
CACNB3-220ENST00000551716 NRF1Q16656 503 aa13.75□□□□□ -0.21
CACNB3-220ENST00000551716 TMEM249Q2WGJ8 235 aa13.75□□□□□ -0.21
CACNB3-220ENST00000551716 OR52E8Q6IFG1 317 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms