RNA–Protein interactions for RNA: ENST00000551320.1

PRPF40B-214, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-214ENST00000551320 HYAL4Q2M3T9 481 aa6.23□□□□□ -1.41
PRPF40B-214ENST00000551320 DEFB113Q30KQ7 82 aa6.23□□□□□ -1.41
PRPF40B-214ENST00000551320 KBTBD12Q3ZCT8 623 aa6.23□□□□□ -1.41
PRPF40B-214ENST00000551320 TCHHL1Q5QJ38 904 aaPredicted RBP6.23□□□□□ -1.41
PRPF40B-214ENST00000551320 ARMC3Q5W041 872 aa6.23□□□□□ -1.41
PRPF40B-214ENST00000551320 HIST2H2AA3Q6FI13 130 aa6.23□□□□□ -1.41
PRPF40B-214ENST00000551320 NIPAL1Q6NVV3 410 aa6.23□□□□□ -1.41
PRPF40B-214ENST00000551320 ANGPTL8Q6UXH0 198 aa6.23□□□□□ -1.41
PRPF40B-214ENST00000551320 PAMR1Q6UXH9 720 aa6.23□□□□□ -1.41
PRPF40B-214ENST00000551320 CLEC9AQ6UXN8 241 aa6.23□□□□□ -1.41
PRPF40B-214ENST00000551320 RGS9BPQ6ZS82 235 aa6.23□□□□□ -1.41
PRPF40B-214ENST00000551320 C3orf62Q6ZUJ4 267 aa6.23□□□□□ -1.41
PRPF40B-214ENST00000551320 SLC29A4Q7RTT9 530 aa6.23□□□□□ -1.41
PRPF40B-214ENST00000551320 HDXQ7Z353 690 aa6.23□□□□□ -1.41
PRPF40B-214ENST00000551320 ZNF550Q7Z398 422 aa6.23□□□□□ -1.41
PRPF40B-214ENST00000551320 CTAGE4Q8IX94 777 aa6.23□□□□□ -1.41
PRPF40B-214ENST00000551320 LAS2Q8IYD9 372 aa6.23□□□□□ -1.41
PRPF40B-214ENST00000551320 CENPLQ8N0S6 344 aaPredicted RBP6.23□□□□□ -1.41
PRPF40B-214ENST00000551320 PLD6Q8N2A8 252 aaKnown RBP6.23□□□□□ -1.41
PRPF40B-214ENST00000551320 PDPRQ8NCN5 879 aa6.23□□□□□ -1.41
PRPF40B-214ENST00000551320 MAPK1IP1LQ8NDC0 245 aa6.23□□□□□ -1.41
PRPF40B-214ENST00000551320 FAM83FQ8NEG4 500 aaPredicted RBP6.23□□□□□ -1.41
PRPF40B-214ENST00000551320 TTLQ8NG68 377 aa6.23□□□□□ -1.41
PRPF40B-214ENST00000551320 SLC22A8Q8TCC7 542 aa6.23□□□□□ -1.41
PRPF40B-214ENST00000551320 PYROXD1Q8WU10 500 aa6.23□□□□□ -1.41
PRPF40B-214ENST00000551320 RNASE6Q93091 150 aaKnown RBP6.23□□□□□ -1.41
PRPF40B-214ENST00000551320 RGMAQ96B86 450 aa6.23□□□□□ -1.41
PRPF40B-214ENST00000551320 WDR34Q96EX3 536 aa6.23□□□□□ -1.41
PRPF40B-214ENST00000551320 CMTM7Q96FZ5 175 aa6.23□□□□□ -1.41
PRPF40B-214ENST00000551320 ZC3HAV1LQ96H79 300 aaKnown RBP6.23□□□□□ -1.41
PRPF40B-214ENST00000551320 WDYHV1Q96HA8 205 aa6.23□□□□□ -1.41
PRPF40B-214ENST00000551320 FBXL20Q96IG2 436 aa6.23□□□□□ -1.41
PRPF40B-214ENST00000551320 MEGF10Q96KG7 1140 aa6.23□□□□□ -1.41
PRPF40B-214ENST00000551320 SGCZQ96LD1 299 aa6.23□□□□□ -1.41
PRPF40B-214ENST00000551320 UBXN10Q96LJ8 280 aa6.23□□□□□ -1.41
PRPF40B-214ENST00000551320 ATOH8Q96SQ7 321 aa6.23□□□□□ -1.41
PRPF40B-214ENST00000551320 GPR22Q99680 433 aa6.23□□□□□ -1.41
PRPF40B-214ENST00000551320 RBBP8Q99708 897 aa6.23□□□□□ -1.41
PRPF40B-214ENST00000551320 NAT9Q9BTE0 207 aa6.23□□□□□ -1.41
PRPF40B-214ENST00000551320 G6PC3Q9BUM1 346 aa6.23□□□□□ -1.41
PRPF40B-214ENST00000551320 EFCAB11Q9BUY7 163 aa6.23□□□□□ -1.41
PRPF40B-214ENST00000551320 MRPL1Q9BYD6 325 aaKnown RBP6.23□□□□□ -1.41
PRPF40B-214ENST00000551320 GALNT8Q9NY28 637 aa6.23□□□□□ -1.41
PRPF40B-214ENST00000551320 GPRC5BQ9NZH0 403 aa6.23□□□□□ -1.41
PRPF40B-214ENST00000551320 GRHL1Q9NZI5 618 aa6.23□□□□□ -1.41
PRPF40B-214ENST00000551320 CPSF2Q9P2I0 782 aaKnown RBP6.23□□□□□ -1.41
PRPF40B-214ENST00000551320 OPTCQ9UBM4 332 aa6.23□□□□□ -1.41
PRPF40B-214ENST00000551320 PYCARDQ9ULZ3 195 aa6.23□□□□□ -1.41
PRPF40B-214ENST00000551320 BOKQ9UMX3 212 aaPredicted RBP6.23□□□□□ -1.41
PRPF40B-214ENST00000551320 USF3Q68DE3 2245 aa6.23□□□□□ -1.41
PRPF40B-214ENST00000551320 RTTNQ86VV8 2226 aa6.23□□□□□ -1.41
PRPF40B-214ENST00000551320 MXRA5Q9NR99 2828 aa6.22□□□□□ -1.41
PRPF40B-214ENST00000551320 C2orf92A0A1B0GVN3 265 aa6.22□□□□□ -1.41
PRPF40B-214ENST00000551320 ESYT3A0FGR9 886 aa6.22□□□□□ -1.41
PRPF40B-214ENST00000551320 HMX2A2RU54 273 aa6.22□□□□□ -1.41
PRPF40B-214ENST00000551320 PRAMEF27A3QJZ7 478 aa6.22□□□□□ -1.41
PRPF40B-214ENST00000551320 FAM159BA6NKW6 160 aa6.22□□□□□ -1.41
PRPF40B-214ENST00000551320 HSPB2A8KAH6 182 aa6.22□□□□□ -1.41
PRPF40B-214ENST00000551320 E7ESA3 106 aa6.22□□□□□ -1.41
PRPF40B-214ENST00000551320 H7C1Q1 480 aa6.22□□□□□ -1.41
PRPF40B-214ENST00000551320 K7EPI3 171 aa6.22□□□□□ -1.41
PRPF40B-214ENST00000551320 OR7A17O14581 309 aa6.22□□□□□ -1.41
PRPF40B-214ENST00000551320 DVL2O14641 736 aa6.22□□□□□ -1.41
PRPF40B-214ENST00000551320 RAD51CO43502 376 aa6.22□□□□□ -1.41
PRPF40B-214ENST00000551320 EPPINO95925 133 aa6.22□□□□□ -1.41
PRPF40B-214ENST00000551320 TGM6O95932 706 aa6.22□□□□□ -1.41
PRPF40B-214ENST00000551320 OPN1LWP04000 364 aa6.22□□□□□ -1.41
PRPF40B-214ENST00000551320 RAF1P04049 648 aa6.22□□□□□ -1.41
PRPF40B-214ENST00000551320 ABCB1P08183 1280 aaPredicted RBP6.22□□□□□ -1.41
PRPF40B-214ENST00000551320 NR2F6P10588 404 aa6.22□□□□□ -1.41
PRPF40B-214ENST00000551320 CHN1P15882 459 aa6.22□□□□□ -1.41
PRPF40B-214ENST00000551320 CD53P19397 219 aa6.22□□□□□ -1.41
PRPF40B-214ENST00000551320 S1PR1P21453 382 aa6.22□□□□□ -1.41
PRPF40B-214ENST00000551320 ADSLP30566 484 aaPredicted RBP6.22□□□□□ -1.41
PRPF40B-214ENST00000551320 HOXC12P31275 282 aa6.22□□□□□ -1.41
PRPF40B-214ENST00000551320 CPOXP36551 454 aa6.22□□□□□ -1.41
PRPF40B-214ENST00000551320 PTGDSP41222 190 aa6.22□□□□□ -1.41
PRPF40B-214ENST00000551320 CASP2P42575 452 aa6.22□□□□□ -1.41
PRPF40B-214ENST00000551320 CDK9P50750 372 aaKnown RBP6.22□□□□□ -1.41
PRPF40B-214ENST00000551320 XKP51811 444 aa6.22□□□□□ -1.41
PRPF40B-214ENST00000551320 GNG11P61952 73 aa6.22□□□□□ -1.41
PRPF40B-214ENST00000551320 SIRPAP78324 504 aa6.22□□□□□ -1.41
PRPF40B-214ENST00000551320 PLIN5Q00G26 463 aa6.22□□□□□ -1.41
PRPF40B-214ENST00000551320 TGM3Q08188 693 aa6.22□□□□□ -1.41
PRPF40B-214ENST00000551320 FAM27E3Q08E93 113 aa6.22□□□□□ -1.41
PRPF40B-214ENST00000551320 PCBP2Q15366 365 aaKnown RBP eCLIP6.22□□□□□ -1.41
PRPF40B-214ENST00000551320 HSPB2Q16082 182 aa6.22□□□□□ -1.41
PRPF40B-214ENST00000551320 UAP1Q16222 522 aaPredicted RBP6.22□□□□□ -1.41
PRPF40B-214ENST00000551320 NTRK2Q16620 822 aa6.22□□□□□ -1.41
PRPF40B-214ENST00000551320 TRMT12Q53H54 448 aaKnown RBP6.22□□□□□ -1.41
PRPF40B-214ENST00000551320 MROH9Q5TGP6 573 aa6.22□□□□□ -1.41
PRPF40B-214ENST00000551320 VASNQ6EMK4 673 aa6.22□□□□□ -1.41
PRPF40B-214ENST00000551320 MRM1Q6IN84 353 aaKnown RBP6.22□□□□□ -1.41
PRPF40B-214ENST00000551320 GRHL2Q6ISB3 625 aa6.22□□□□□ -1.41
PRPF40B-214ENST00000551320 CYP20A1Q6UW02 462 aa6.22□□□□□ -1.41
PRPF40B-214ENST00000551320 REC114Q7Z4M0 266 aa6.22□□□□□ -1.41
PRPF40B-214ENST00000551320 GOLGA7Q7Z5G4 137 aa6.22□□□□□ -1.41
PRPF40B-214ENST00000551320 UBQLNLQ8IYU4 475 aa6.22□□□□□ -1.41
PRPF40B-214ENST00000551320 ZNF615Q8N8J6 731 aa6.22□□□□□ -1.41
PRPF40B-214ENST00000551320 ZNF441Q8N8Z8 693 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms