RNA–Protein interactions for RNA: ENST00000550804.5

CALCOCO1-218, Transcript of calcium binding and coiled-coil domain 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CALCOCO1, Length 2,291 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-218ENST00000550804 TUBA1AQ71U36 451 aa13.34□□□□□ -0.27
CALCOCO1-218ENST00000550804 IQCHQ86VS3 1027 aa13.34□□□□□ -0.27
CALCOCO1-218ENST00000550804 SLC22A16Q86VW1 577 aa13.34□□□□□ -0.27
CALCOCO1-218ENST00000550804 VRK2Q86Y07 508 aa13.34□□□□□ -0.27
CALCOCO1-218ENST00000550804 OR4N5Q8IXE1 308 aa13.34□□□□□ -0.27
CALCOCO1-218ENST00000550804 SLC34A3Q8N130 599 aa13.34□□□□□ -0.27
CALCOCO1-218ENST00000550804 NATD1Q8N6N6 113 aa13.34□□□□□ -0.27
CALCOCO1-218ENST00000550804 PSD4Q8NDX1 1056 aa13.34□□□□□ -0.27
CALCOCO1-218ENST00000550804 FAM83FQ8NEG4 500 aaPredicted RBP13.34□□□□□ -0.27
CALCOCO1-218ENST00000550804 OR4K5Q8NGD3 323 aa13.34□□□□□ -0.27
CALCOCO1-218ENST00000550804 TSACCQ96A04 125 aaPredicted RBP13.34□□□□□ -0.27
CALCOCO1-218ENST00000550804 COL26A1Q96A83 441 aa13.34□□□□□ -0.27
CALCOCO1-218ENST00000550804 DACH2Q96NX9 599 aa13.34□□□□□ -0.27
CALCOCO1-218ENST00000550804 TIMM29Q9BSF4 260 aa13.34□□□□□ -0.27
CALCOCO1-218ENST00000550804 FNDC11Q9BVV2 318 aa13.34□□□□□ -0.27
CALCOCO1-218ENST00000550804 PITHD1Q9GZP4 211 aaPredicted RBP13.34□□□□□ -0.27
CALCOCO1-218ENST00000550804 POLMQ9NP87 494 aaPredicted RBP13.34□□□□□ -0.27
CALCOCO1-218ENST00000550804 MGAT4BQ9UQ53 548 aa13.34□□□□□ -0.27
CALCOCO1-218ENST00000550804 NTNG1Q9Y2I2 539 aa13.34□□□□□ -0.27
CALCOCO1-218ENST00000550804 A0A1W2PQF6 199 aa13.33□□□□□ -0.28
CALCOCO1-218ENST00000550804 SH3D21A4FU49 640 aa13.33□□□□□ -0.28
CALCOCO1-218ENST00000550804 LRRTM2O43300 516 aa13.33□□□□□ -0.28
CALCOCO1-218ENST00000550804 TBX1O43435 398 aa13.33□□□□□ -0.28
CALCOCO1-218ENST00000550804 GTF2E2P29084 291 aaKnown RBP13.33□□□□□ -0.28
CALCOCO1-218ENST00000550804 NTSP30990 170 aa13.33□□□□□ -0.28
CALCOCO1-218ENST00000550804 PPP5CP53041 499 aa13.33□□□□□ -0.28
CALCOCO1-218ENST00000550804 C6orf132Q5T0Z8 1188 aa13.33□□□□□ -0.28
CALCOCO1-218ENST00000550804 USP43Q70EL4 1123 aa13.33□□□□□ -0.28
CALCOCO1-218ENST00000550804 OR2L5Q8NG80 312 aa13.33□□□□□ -0.28
CALCOCO1-218ENST00000550804 FAIM2Q9BWQ8 316 aa13.33□□□□□ -0.28
CALCOCO1-218ENST00000550804 PLA2G12AQ9BZM1 189 aa13.33□□□□□ -0.28
CALCOCO1-218ENST00000550804 TTYH1Q9H313 450 aaPredicted RBP13.33□□□□□ -0.28
CALCOCO1-218ENST00000550804 CHST2Q9Y4C5 530 aa13.33□□□□□ -0.28
CALCOCO1-218ENST00000550804 GPR89AB7ZAQ6 455 aa13.33□□□□□ -0.28
CALCOCO1-218ENST00000550804 H3BQ06 376 aaPredicted RBP13.33□□□□□ -0.28
CALCOCO1-218ENST00000550804 CTDSP2O14595 271 aa13.33□□□□□ -0.28
CALCOCO1-218ENST00000550804 PROM1O43490 865 aa13.33□□□□□ -0.28
CALCOCO1-218ENST00000550804 PLRG1O43660 514 aaKnown RBP13.33□□□□□ -0.28
CALCOCO1-218ENST00000550804 LGI1O95970 557 aa13.33□□□□□ -0.28
CALCOCO1-218ENST00000550804 GPR89BP0CG08 455 aa13.33□□□□□ -0.28
CALCOCO1-218ENST00000550804 TGM4P49221 684 aa13.33□□□□□ -0.28
CALCOCO1-218ENST00000550804 UGT2B15P54855 530 aa13.33□□□□□ -0.28
CALCOCO1-218ENST00000550804 TRA2BP62995 288 aaKnown RBP13.33□□□□□ -0.28
CALCOCO1-218ENST00000550804 SFSWAPQ12872 951 aaKnown RBP13.33□□□□□ -0.28
CALCOCO1-218ENST00000550804 FBXO43Q4G163 708 aa13.33□□□□□ -0.28
CALCOCO1-218ENST00000550804 TMEM35AQ53FP2 167 aa13.33□□□□□ -0.28
CALCOCO1-218ENST00000550804 SLX4IPQ5VYV7 408 aa13.33□□□□□ -0.28
CALCOCO1-218ENST00000550804 ENPP7Q6UWV6 458 aa13.33□□□□□ -0.28
CALCOCO1-218ENST00000550804 CASP12Q6UXS9 341 aa13.33□□□□□ -0.28
CALCOCO1-218ENST00000550804 TMEFF1Q8IYR6 380 aa13.33□□□□□ -0.28
CALCOCO1-218ENST00000550804 CADM3Q8N126 398 aa13.33□□□□□ -0.28
CALCOCO1-218ENST00000550804 PPP1R14BQ96C90 147 aa13.33□□□□□ -0.28
CALCOCO1-218ENST00000550804 TRMT61AQ96FX7 289 aaKnown RBP13.33□□□□□ -0.28
CALCOCO1-218ENST00000550804 CRELD1Q96HD1 420 aa13.33□□□□□ -0.28
CALCOCO1-218ENST00000550804 OPALINQ96PE5 141 aa13.33□□□□□ -0.28
CALCOCO1-218ENST00000550804 KCNS3Q9BQ31 491 aa13.33□□□□□ -0.28
CALCOCO1-218ENST00000550804 MMP27Q9H306 513 aa13.33□□□□□ -0.28
CALCOCO1-218ENST00000550804 EGLN3Q9H6Z9 239 aa13.33□□□□□ -0.28
CALCOCO1-218ENST00000550804 EHD3Q9NZN3 535 aa13.33□□□□□ -0.28
CALCOCO1-218ENST00000550804 ZNF624Q9P2J8 865 aaPredicted RBP13.33□□□□□ -0.28
CALCOCO1-218ENST00000550804 A0A1W2PRQ8 180 aa13.32□□□□□ -0.28
CALCOCO1-218ENST00000550804 AGAP5A6NIR3 686 aa13.32□□□□□ -0.28
CALCOCO1-218ENST00000550804 ATP6V1G1O75348 118 aa13.32□□□□□ -0.28
CALCOCO1-218ENST00000550804 ZIC2O95409 532 aaPredicted RBP13.32□□□□□ -0.28
CALCOCO1-218ENST00000550804 CD40LGP29965 261 aa13.32□□□□□ -0.28
CALCOCO1-218ENST00000550804 PPP2R1BP30154 601 aa13.32□□□□□ -0.28
CALCOCO1-218ENST00000550804 SNRPGP62308 76 aaKnown RBP13.32□□□□□ -0.28
CALCOCO1-218ENST00000550804 TEKQ02763 1124 aa13.32□□□□□ -0.28
CALCOCO1-218ENST00000550804 DBPQ10586 325 aaPredicted RBP13.32□□□□□ -0.28
CALCOCO1-218ENST00000550804 GINS1Q14691 196 aa13.32□□□□□ -0.28
CALCOCO1-218ENST00000550804 TJAP1Q5JTD0 557 aa13.32□□□□□ -0.28
CALCOCO1-218ENST00000550804 C12orf73Q69YU5 71 aa13.32□□□□□ -0.28
CALCOCO1-218ENST00000550804 SDE2Q6IQ49 451 aa13.32□□□□□ -0.28
CALCOCO1-218ENST00000550804 SLC48A1Q6P1K1 146 aa13.32□□□□□ -0.28
CALCOCO1-218ENST00000550804 LINC00299Q6ZSB3 139 aa13.32□□□□□ -0.28
CALCOCO1-218ENST00000550804 VN1R4Q7Z5H5 301 aa13.32□□□□□ -0.28
CALCOCO1-218ENST00000550804 KRT73Q86Y46 540 aa13.32□□□□□ -0.28
CALCOCO1-218ENST00000550804 FRMD1Q8N878 549 aa13.32□□□□□ -0.28
CALCOCO1-218ENST00000550804 MORN4Q8NDC4 146 aa13.32□□□□□ -0.28
CALCOCO1-218ENST00000550804 LCN9Q8WX39 176 aa13.32□□□□□ -0.28
CALCOCO1-218ENST00000550804 OR1E3Q8WZA6 343 aa13.32□□□□□ -0.28
CALCOCO1-218ENST00000550804 FAM131CQ96AQ9 280 aa13.32□□□□□ -0.28
CALCOCO1-218ENST00000550804 CNPPD1Q9BV87 410 aa13.32□□□□□ -0.28
CALCOCO1-218ENST00000550804 RERGLQ9H628 205 aa13.32□□□□□ -0.28
CALCOCO1-218ENST00000550804 HHATLQ9HCP6 504 aa13.32□□□□□ -0.28
CALCOCO1-218ENST00000550804 CNOT2Q9NZN8 540 aaKnown RBP13.32□□□□□ -0.28
CALCOCO1-218ENST00000550804 GPR52Q9Y2T5 361 aa13.32□□□□□ -0.28
CALCOCO1-218ENST00000550804 GON4LQ3T8J9 2241 aa13.32□□□□□ -0.28
CALCOCO1-218ENST00000550804 SCN3AQ9NY46 2000 aa13.32□□□□□ -0.28
CALCOCO1-218ENST00000550804 A0A087WUU8 490 aa13.32□□□□□ -0.28
CALCOCO1-218ENST00000550804 PRSS38A1L453 326 aa13.32□□□□□ -0.28
CALCOCO1-218ENST00000550804 MPZL2O60487 215 aa13.32□□□□□ -0.28
CALCOCO1-218ENST00000550804 SNRNP200O75643 2136 aaKnown RBP13.32□□□□□ -0.28
CALCOCO1-218ENST00000550804 KLF8O95600 359 aaPredicted RBP13.32□□□□□ -0.28
CALCOCO1-218ENST00000550804 HBQ1P09105 142 aa13.32□□□□□ -0.28
CALCOCO1-218ENST00000550804 F3P13726 295 aa13.32□□□□□ -0.28
CALCOCO1-218ENST00000550804 TRHRP34981 398 aaPredicted RBP13.32□□□□□ -0.28
CALCOCO1-218ENST00000550804 GIPRP48546 466 aa13.32□□□□□ -0.28
CALCOCO1-218ENST00000550804 RNF144AP50876 292 aaPredicted RBP13.32□□□□□ -0.28
CALCOCO1-218ENST00000550804 RAB15P59190 212 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms