RNA–Protein interactions for RNA: ENST00000550406.1

RAB5C-206, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5C, Length 500 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-206ENST00000550406 GAB1Q13480 694 aa12.07□□□□□ -0.48
RAB5C-206ENST00000550406 MEP1AQ16819 746 aa12.07□□□□□ -0.48
RAB5C-206ENST00000550406 GTDC1Q4AE62 458 aa12.07□□□□□ -0.48
RAB5C-206ENST00000550406 CT45A2Q5DJT8 189 aa12.07□□□□□ -0.48
RAB5C-206ENST00000550406 PIGGQ5H8A4 983 aa12.07□□□□□ -0.48
RAB5C-206ENST00000550406 ACER2Q5QJU3 275 aa12.07□□□□□ -0.48
RAB5C-206ENST00000550406 AGAP7PQ5VUJ5 663 aa12.07□□□□□ -0.48
RAB5C-206ENST00000550406 ISLR2Q6UXK2 745 aa12.07□□□□□ -0.48
RAB5C-206ENST00000550406 NPSR1Q6W5P4 371 aa12.07□□□□□ -0.48
RAB5C-206ENST00000550406 TMEM64Q6YI46 380 aa12.07□□□□□ -0.48
RAB5C-206ENST00000550406 LINC00696Q6ZRV3 163 aa12.07□□□□□ -0.48
RAB5C-206ENST00000550406 SLC29A4Q7RTT9 530 aa12.07□□□□□ -0.48
RAB5C-206ENST00000550406 MSRB3Q8IXL7 192 aa12.07□□□□□ -0.48
RAB5C-206ENST00000550406 BEST3Q8N1M1 668 aa12.07□□□□□ -0.48
RAB5C-206ENST00000550406 ANKS4BQ8N8V4 417 aa12.07□□□□□ -0.48
RAB5C-206ENST00000550406 VPS37AQ8NEZ2 397 aa12.07□□□□□ -0.48
RAB5C-206ENST00000550406 OR5AK3PQ8NH89 298 aa12.07□□□□□ -0.48
RAB5C-206ENST00000550406 SFXN5Q8TD22 340 aa12.07□□□□□ -0.48
RAB5C-206ENST00000550406 ZNF354BQ96LW1 612 aa12.07□□□□□ -0.48
RAB5C-206ENST00000550406 AGAP4Q96P64 663 aa12.07□□□□□ -0.48
RAB5C-206ENST00000550406 PHF12Q96QT6 1004 aa12.07□□□□□ -0.48
RAB5C-206ENST00000550406 PAIP1Q9H074 479 aaKnown RBP12.07□□□□□ -0.48
RAB5C-206ENST00000550406 NXF5Q9H1B4 397 aaKnown RBP12.07□□□□□ -0.48
RAB5C-206ENST00000550406 SERHL2Q9H4I8 314 aa12.07□□□□□ -0.48
RAB5C-206ENST00000550406 C3orf14Q9HBI5 128 aa12.07□□□□□ -0.48
RAB5C-206ENST00000550406 DDX18Q9NVP1 670 aaKnown RBP12.07□□□□□ -0.48
RAB5C-206ENST00000550406 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.07□□□□□ -0.48
RAB5C-206ENST00000550406 GPATCH2Q9NW75 528 aa12.07□□□□□ -0.48
RAB5C-206ENST00000550406 PLA2G3Q9NZ20 509 aa12.07□□□□□ -0.48
RAB5C-206ENST00000550406 STMN3Q9NZ72 180 aa12.07□□□□□ -0.48
RAB5C-206ENST00000550406 GPR55Q9Y2T6 319 aaPredicted RBP12.07□□□□□ -0.48
RAB5C-206ENST00000550406 SNX8Q9Y5X2 465 aa12.07□□□□□ -0.48
RAB5C-206ENST00000550406 CACNA1BQ00975 2339 aa12.06□□□□□ -0.48
RAB5C-206ENST00000550406 C2orf92A0A1B0GVN3 265 aa12.06□□□□□ -0.48
RAB5C-206ENST00000550406 A0A1W2PP18 115 aa12.06□□□□□ -0.48
RAB5C-206ENST00000550406 MKRN2OSH3BPM6 223 aa12.06□□□□□ -0.48
RAB5C-206ENST00000550406 CCDC22O60826 627 aa12.06□□□□□ -0.48
RAB5C-206ENST00000550406 ITGA10O75578 1167 aa12.06□□□□□ -0.48
RAB5C-206ENST00000550406 SNRPB2P08579 225 aaKnown RBP12.06□□□□□ -0.48
RAB5C-206ENST00000550406 ACP2P11117 423 aa12.06□□□□□ -0.48
RAB5C-206ENST00000550406 UQCRC2P22695 453 aa12.06□□□□□ -0.48
RAB5C-206ENST00000550406 ADSLP30566 484 aaPredicted RBP12.06□□□□□ -0.48
RAB5C-206ENST00000550406 PPICP45877 212 aa12.06□□□□□ -0.48
RAB5C-206ENST00000550406 CD97P48960 835 aa12.06□□□□□ -0.48
RAB5C-206ENST00000550406 NR0B1P51843 470 aaKnown RBP12.06□□□□□ -0.48
RAB5C-206ENST00000550406 PRKAG1P54619 331 aa12.06□□□□□ -0.48
RAB5C-206ENST00000550406 CORO7P57737 925 aa12.06□□□□□ -0.48
RAB5C-206ENST00000550406 PSG6Q00889 435 aa12.06□□□□□ -0.48
RAB5C-206ENST00000550406 MAPKAPK3Q16644 382 aa12.06□□□□□ -0.48
RAB5C-206ENST00000550406 DLEU7Q6UYE1 221 aa12.06□□□□□ -0.48
RAB5C-206ENST00000550406 C6orf120Q7Z4R8 191 aa12.06□□□□□ -0.48
RAB5C-206ENST00000550406 ZNF227Q86WZ6 799 aa12.06□□□□□ -0.48
RAB5C-206ENST00000550406 LGI4Q8N135 537 aa12.06□□□□□ -0.48
RAB5C-206ENST00000550406 SLC5A8Q8N695 610 aa12.06□□□□□ -0.48
RAB5C-206ENST00000550406 OR4N2Q8NGD1 307 aa12.06□□□□□ -0.48
RAB5C-206ENST00000550406 OR5L2Q8NGL0 311 aa12.06□□□□□ -0.48
RAB5C-206ENST00000550406 TSPEARQ8WU66 669 aa12.06□□□□□ -0.48
RAB5C-206ENST00000550406 TP53INP1Q96A56 240 aa12.06□□□□□ -0.48
RAB5C-206ENST00000550406 ITCHQ96J02 903 aa12.06□□□□□ -0.48
RAB5C-206ENST00000550406 BTBD9Q96Q07 612 aa12.06□□□□□ -0.48
RAB5C-206ENST00000550406 PANX1Q96RD7 426 aa12.06□□□□□ -0.48
RAB5C-206ENST00000550406 GAL3ST4Q96RP7 486 aa12.06□□□□□ -0.48
RAB5C-206ENST00000550406 RASL10BQ96S79 203 aa12.06□□□□□ -0.48
RAB5C-206ENST00000550406 YIPF4Q9BSR8 244 aa12.06□□□□□ -0.48
RAB5C-206ENST00000550406 LMF2Q9BU23 707 aaKnown RBP12.06□□□□□ -0.48
RAB5C-206ENST00000550406 NEUROD4Q9HD90 331 aa12.06□□□□□ -0.48
RAB5C-206ENST00000550406 ZCCHC3Q9NUD5 404 aaKnown RBP12.06□□□□□ -0.48
RAB5C-206ENST00000550406 MAP10Q9P2G4 905 aa12.06□□□□□ -0.48
RAB5C-206ENST00000550406 PRODH2Q9UF12 536 aa12.06□□□□□ -0.48
RAB5C-206ENST00000550406 CFL2Q9Y281 166 aa12.06□□□□□ -0.48
RAB5C-206ENST00000550406 CSAG2Q9Y5P2 127 aa12.06□□□□□ -0.48
RAB5C-206ENST00000550406 KMT2BQ9UMN6 2715 aaPredicted RBP12.05□□□□□ -0.48
RAB5C-206ENST00000550406 TRBV5-3A0A0A0MS03 114 aa12.05□□□□□ -0.48
RAB5C-206ENST00000550406 DYTNA2CJ06 578 aa12.05□□□□□ -0.48
RAB5C-206ENST00000550406 CAPN14A8MX76 684 aa12.05□□□□□ -0.48
RAB5C-206ENST00000550406 ERVH48-1M5A8F1 160 aa12.05□□□□□ -0.48
RAB5C-206ENST00000550406 RFXANKO14593 260 aa12.05□□□□□ -0.48
RAB5C-206ENST00000550406 SLC22A2O15244 555 aa12.05□□□□□ -0.48
RAB5C-206ENST00000550406 COQ9O75208 318 aa12.05□□□□□ -0.48
RAB5C-206ENST00000550406 WDPCPO95876 746 aa12.05□□□□□ -0.48
RAB5C-206ENST00000550406 F10P00742 488 aa12.05□□□□□ -0.48
RAB5C-206ENST00000550406 HMGN2P05204 90 aaKnown RBP12.05□□□□□ -0.48
RAB5C-206ENST00000550406 ZCCHC18P0CG32 403 aa12.05□□□□□ -0.48
RAB5C-206ENST00000550406 DRD5P21918 477 aa12.05□□□□□ -0.48
RAB5C-206ENST00000550406 CD96P40200 585 aa12.05□□□□□ -0.48
RAB5C-206ENST00000550406 TRPC1P48995 793 aa12.05□□□□□ -0.48
RAB5C-206ENST00000550406 MAN2A2P49641 1150 aa12.05□□□□□ -0.48
RAB5C-206ENST00000550406 CASP9P55211 416 aa12.05□□□□□ -0.48
RAB5C-206ENST00000550406 LRRC74AQ0VAA2 488 aa12.05□□□□□ -0.48
RAB5C-206ENST00000550406 NNATQ16517 81 aa12.05□□□□□ -0.48
RAB5C-206ENST00000550406 LRIF1Q5T3J3 769 aa12.05□□□□□ -0.48
RAB5C-206ENST00000550406 ABHD17BQ5VST6 288 aa12.05□□□□□ -0.48
RAB5C-206ENST00000550406 IRAK1BP1Q5VVH5 260 aa12.05□□□□□ -0.48
RAB5C-206ENST00000550406 SAXO2Q658L1 398 aa12.05□□□□□ -0.48
RAB5C-206ENST00000550406 MFSD12Q6NUT3 480 aa12.05□□□□□ -0.48
RAB5C-206ENST00000550406 IGFL3Q6UXB1 125 aa12.05□□□□□ -0.48
RAB5C-206ENST00000550406 ZNF621Q6ZSS3 439 aa12.05□□□□□ -0.48
RAB5C-206ENST00000550406 SNX32Q86XE0 403 aa12.05□□□□□ -0.48
RAB5C-206ENST00000550406 POU5F2Q8N7G0 328 aa12.05□□□□□ -0.48
RAB5C-206ENST00000550406 SLC16A11Q8NCK7 471 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 91.5 ms