RNA–Protein interactions for RNA: ENST00000550335.5

HCFC2-204, Transcript of host cell factor C2, humanhuman

TSL 5

Gene HCFC2, Length 1,223 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-204ENST00000550335 ASNSP08243 561 aa4.9□□□□□ -1.63
HCFC2-204ENST00000550335 CLUP10909 449 aa4.9□□□□□ -1.63
HCFC2-204ENST00000550335 GNB3P16520 340 aa4.9□□□□□ -1.63
HCFC2-204ENST00000550335 DPP4P27487 766 aa4.9□□□□□ -1.63
HCFC2-204ENST00000550335 AXLP30530 894 aa4.9□□□□□ -1.63
HCFC2-204ENST00000550335 SLC1A6P48664 564 aa4.9□□□□□ -1.63
HCFC2-204ENST00000550335 SGSHP51688 502 aa4.9□□□□□ -1.63
HCFC2-204ENST00000550335 HERVK_113P63132 956 aa4.9□□□□□ -1.63
HCFC2-204ENST00000550335 ERVK-8P63133 956 aa4.9□□□□□ -1.63
HCFC2-204ENST00000550335 MAJINQ3KP22 176 aa4.9□□□□□ -1.63
HCFC2-204ENST00000550335 SLC36A3Q495N2 470 aa4.9□□□□□ -1.63
HCFC2-204ENST00000550335 BEND6Q5SZJ8 279 aaPredicted RBP4.9□□□□□ -1.63
HCFC2-204ENST00000550335 ATAD3BQ5T9A4 648 aa4.9□□□□□ -1.63
HCFC2-204ENST00000550335 ASPHD2Q6ICH7 369 aa4.9□□□□□ -1.63
HCFC2-204ENST00000550335 Q7L0L9 218 aa4.9□□□□□ -1.63
HCFC2-204ENST00000550335 LUZP1Q86V48 1076 aa4.9□□□□□ -1.63
HCFC2-204ENST00000550335 CATSPERDQ86XM0 798 aa4.9□□□□□ -1.63
HCFC2-204ENST00000550335 GVQW1Q8N7I0 195 aa4.9□□□□□ -1.63
HCFC2-204ENST00000550335 FADS6Q8N9I5 356 aa4.9□□□□□ -1.63
HCFC2-204ENST00000550335 OR6F1Q8NGZ6 308 aa4.9□□□□□ -1.63
HCFC2-204ENST00000550335 ZNF519Q8TB69 540 aa4.9□□□□□ -1.63
HCFC2-204ENST00000550335 PCNPQ8WW12 178 aaKnown RBP4.9□□□□□ -1.63
HCFC2-204ENST00000550335 ALKBH3Q96Q83 286 aaPredicted RBP4.9□□□□□ -1.63
HCFC2-204ENST00000550335 VPS35Q96QK1 796 aa4.9□□□□□ -1.63
HCFC2-204ENST00000550335 F2RL3Q96RI0 385 aa4.9□□□□□ -1.63
HCFC2-204ENST00000550335 SYT15Q9BQS2 421 aa4.9□□□□□ -1.63
HCFC2-204ENST00000550335 CRACR2AQ9BSW2 395 aa4.9□□□□□ -1.63
HCFC2-204ENST00000550335 RAB11FIP5Q9BXF6 653 aa4.9□□□□□ -1.63
HCFC2-204ENST00000550335 ERVK-6Q9BXR3 956 aa4.9□□□□□ -1.63
HCFC2-204ENST00000550335 RPAP3Q9H6T3 665 aaPredicted RBP4.9□□□□□ -1.63
HCFC2-204ENST00000550335 IL1RAPQ9NPH3 570 aa4.9□□□□□ -1.63
HCFC2-204ENST00000550335 PROCRQ9UNN8 238 aa4.9□□□□□ -1.63
HCFC2-204ENST00000550335 RRP15Q9Y3B9 282 aaKnown RBP4.9□□□□□ -1.63
HCFC2-204ENST00000550335 PYGO1Q9Y3Y4 419 aa4.9□□□□□ -1.63
HCFC2-204ENST00000550335 RNF17Q9BXT8 1623 aaKnown RBP4.9□□□□□ -1.63
HCFC2-204ENST00000550335 ZC3H13Q5T200 1668 aaKnown RBP4.89□□□□□ -1.63
HCFC2-204ENST00000550335 PTPRTO14522 1441 aa4.89□□□□□ -1.63
HCFC2-204ENST00000550335 PTPRUQ92729 1446 aa4.89□□□□□ -1.63
HCFC2-204ENST00000550335 PLA2R1Q13018 1463 aa4.89□□□□□ -1.63
HCFC2-204ENST00000550335 NLRP1Q9C000 1473 aa4.89□□□□□ -1.63
HCFC2-204ENST00000550335 SYNJ2BP-COX16A0A087WUM0 186 aa4.89□□□□□ -1.63
HCFC2-204ENST00000550335 TRIM49BA6NDI0 452 aa4.89□□□□□ -1.63
HCFC2-204ENST00000550335 A8MUI8 341 aa4.89□□□□□ -1.63
HCFC2-204ENST00000550335 ERVV-2B6SEH9 535 aa4.89□□□□□ -1.63
HCFC2-204ENST00000550335 ZNF749O43361 778 aa4.89□□□□□ -1.63
HCFC2-204ENST00000550335 MTX2O75431 263 aa4.89□□□□□ -1.63
HCFC2-204ENST00000550335 GOT2P00505 430 aaKnown RBP4.89□□□□□ -1.63
HCFC2-204ENST00000550335 CSF2P04141 144 aa4.89□□□□□ -1.63
HCFC2-204ENST00000550335 RPA2P15927 270 aa4.89□□□□□ -1.63
HCFC2-204ENST00000550335 DRD5P21918 477 aa4.89□□□□□ -1.63
HCFC2-204ENST00000550335 RFC2P35250 354 aa4.89□□□□□ -1.63
HCFC2-204ENST00000550335 HTR5AP47898 357 aa4.89□□□□□ -1.63
HCFC2-204ENST00000550335 NDST1P52848 882 aa4.89□□□□□ -1.63
HCFC2-204ENST00000550335 LRRC8BQ6P9F7 803 aa4.89□□□□□ -1.63
HCFC2-204ENST00000550335 LCLAT1Q6UWP7 414 aa4.89□□□□□ -1.63
HCFC2-204ENST00000550335 Q6ZRP5 223 aa4.89□□□□□ -1.63
HCFC2-204ENST00000550335 ZDHHC21Q8IVQ6 265 aa4.89□□□□□ -1.63
HCFC2-204ENST00000550335 ARFGAP2Q8N6H7 521 aa4.89□□□□□ -1.63
HCFC2-204ENST00000550335 CHDHQ8NE62 594 aaPredicted RBP4.89□□□□□ -1.63
HCFC2-204ENST00000550335 NUP37Q8NFH4 326 aa4.89□□□□□ -1.63
HCFC2-204ENST00000550335 OR2T6Q8NHC8 308 aa4.89□□□□□ -1.63
HCFC2-204ENST00000550335 FBXO17Q96EF6 278 aa4.89□□□□□ -1.63
HCFC2-204ENST00000550335 C4orf36Q96KX1 117 aa4.89□□□□□ -1.63
HCFC2-204ENST00000550335 VSTM2LQ96N03 204 aa4.89□□□□□ -1.63
HCFC2-204ENST00000550335 USP28Q96RU2 1077 aa4.89□□□□□ -1.63
HCFC2-204ENST00000550335 TSPY26PQ9H489 355 aa4.89□□□□□ -1.63
HCFC2-204ENST00000550335 ALG9Q9H6U8 611 aa4.89□□□□□ -1.63
HCFC2-204ENST00000550335 RMND5AQ9H871 391 aa4.89□□□□□ -1.63
HCFC2-204ENST00000550335 WDR41Q9HAD4 459 aa4.89□□□□□ -1.63
HCFC2-204ENST00000550335 NMUR1Q9HB89 426 aa4.89□□□□□ -1.63
HCFC2-204ENST00000550335 NRN1Q9NPD7 142 aa4.89□□□□□ -1.63
HCFC2-204ENST00000550335 C1orf123Q9NWV4 160 aa4.89□□□□□ -1.63
HCFC2-204ENST00000550335 XPO7Q9UIA9 1087 aaKnown RBP4.89□□□□□ -1.63
HCFC2-204ENST00000550335 MRPS18CQ9Y3D5 142 aaKnown RBP4.89□□□□□ -1.63
HCFC2-204ENST00000550335 CROCC2H7BZ55 1655 aa4.89□□□□□ -1.63
HCFC2-204ENST00000550335 PRDM15P57071 1507 aaPredicted RBP4.88□□□□□ -1.63
HCFC2-204ENST00000550335 LMTK2Q8IWU2 1503 aa4.88□□□□□ -1.63
HCFC2-204ENST00000550335 CLRN2A0PK11 232 aa4.88□□□□□ -1.63
HCFC2-204ENST00000550335 IFITM10A6NMD0 228 aa4.88□□□□□ -1.63
HCFC2-204ENST00000550335 WASH3PC4AMC7 463 aa4.88□□□□□ -1.63
HCFC2-204ENST00000550335 SLCO1B7G3V0H7 640 aa4.88□□□□□ -1.63
HCFC2-204ENST00000550335 H0YL77 283 aa4.88□□□□□ -1.63
HCFC2-204ENST00000550335 SDHDO14521 159 aa4.88□□□□□ -1.63
HCFC2-204ENST00000550335 BUB1O43683 1085 aa4.88□□□□□ -1.63
HCFC2-204ENST00000550335 TSPAN2O60636 221 aa4.88□□□□□ -1.63
HCFC2-204ENST00000550335 HMMRO75330 724 aa4.88□□□□□ -1.63
HCFC2-204ENST00000550335 STK17BO94768 372 aa4.88□□□□□ -1.63
HCFC2-204ENST00000550335 MFN2O95140 757 aa4.88□□□□□ -1.63
HCFC2-204ENST00000550335 DUS4LO95620 317 aaKnown RBP4.88□□□□□ -1.63
HCFC2-204ENST00000550335 UGT2B4P06133 528 aa4.88□□□□□ -1.63
HCFC2-204ENST00000550335 ADORA3P0DMS8 318 aa4.88□□□□□ -1.63
HCFC2-204ENST00000550335 CALML3P27482 149 aa4.88□□□□□ -1.63
HCFC2-204ENST00000550335 GBX2P52951 348 aaPredicted RBP4.88□□□□□ -1.63
HCFC2-204ENST00000550335 ACTR1AP61163 376 aa4.88□□□□□ -1.63
HCFC2-204ENST00000550335 NAAAQ02083 359 aa4.88□□□□□ -1.63
HCFC2-204ENST00000550335 EMC2Q15006 297 aa4.88□□□□□ -1.63
HCFC2-204ENST00000550335 MLF2Q15773 248 aaPredicted RBP4.88□□□□□ -1.63
HCFC2-204ENST00000550335 KNOP1Q1ED39 458 aaKnown RBP4.88□□□□□ -1.63
HCFC2-204ENST00000550335 MTHFSDQ2M296 383 aaKnown RBP4.88□□□□□ -1.63
HCFC2-204ENST00000550335 LRIT3Q3SXY7 679 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms