RNA–Protein interactions for RNA: ENST00000550219.1

NUP188-211, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 886 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-211ENST00000550219 TTTY12Q9BZ98 90 aa12.4□□□□□ -0.42
NUP188-211ENST00000550219 TP63Q9H3D4 680 aaPredicted RBP12.4□□□□□ -0.42
NUP188-211ENST00000550219 LYRM4Q9HD34 91 aa12.4□□□□□ -0.42
NUP188-211ENST00000550219 TCF7L2Q9NQB0 619 aa12.4□□□□□ -0.42
NUP188-211ENST00000550219 COPS7AQ9UBW8 275 aa12.4□□□□□ -0.42
NUP188-211ENST00000550219 MCM8Q9UJA3 840 aa12.4□□□□□ -0.42
NUP188-211ENST00000550219 LRBAP50851 2863 aa12.39□□□□□ -0.43
NUP188-211ENST00000550219 A0A0G2JND7 137 aa12.39□□□□□ -0.43
NUP188-211ENST00000550219 GOLGA8QA0A0J9YX86 632 aa12.39□□□□□ -0.43
NUP188-211ENST00000550219 GOLGA8OA6NCC3 632 aa12.39□□□□□ -0.43
NUP188-211ENST00000550219 NKX2-6A6NCS4 301 aa12.39□□□□□ -0.43
NUP188-211ENST00000550219 NPIPA2E9PIF3 369 aa12.39□□□□□ -0.43
NUP188-211ENST00000550219 GOLGA8NF8WBI6 632 aa12.39□□□□□ -0.43
NUP188-211ENST00000550219 NPIPA3F8WFD2 350 aa12.39□□□□□ -0.43
NUP188-211ENST00000550219 KLK1P06870 262 aa12.39□□□□□ -0.43
NUP188-211ENST00000550219 POU3F2P20265 443 aaPredicted RBP12.39□□□□□ -0.43
NUP188-211ENST00000550219 TIA1P31483 386 aaKnown RBP eCLIP12.39□□□□□ -0.43
NUP188-211ENST00000550219 DNASE1L1P49184 302 aa12.39□□□□□ -0.43
NUP188-211ENST00000550219 KRTAP10-9P60411 292 aa12.39□□□□□ -0.43
NUP188-211ENST00000550219 RNF4P78317 190 aa12.39□□□□□ -0.43
NUP188-211ENST00000550219 TLE4Q04727 773 aa12.39□□□□□ -0.43
NUP188-211ENST00000550219 SERTAD2Q14140 314 aa12.39□□□□□ -0.43
NUP188-211ENST00000550219 GALNTL6Q49A17 601 aa12.39□□□□□ -0.43
NUP188-211ENST00000550219 NOXRED1Q6NXP6 359 aa12.39□□□□□ -0.43
NUP188-211ENST00000550219 PAOXQ6QHF9 649 aa12.39□□□□□ -0.43
NUP188-211ENST00000550219 RTL4Q6ZR62 310 aa12.39□□□□□ -0.43
NUP188-211ENST00000550219 GK5Q6ZS86 529 aa12.39□□□□□ -0.43
NUP188-211ENST00000550219 ACAD11Q709F0 780 aa12.39□□□□□ -0.43
NUP188-211ENST00000550219 SPATA19Q7Z5L4 167 aa12.39□□□□□ -0.43
NUP188-211ENST00000550219 NUDT13Q86X67 352 aa12.39□□□□□ -0.43
NUP188-211ENST00000550219 OR5M9Q8NGP3 310 aa12.39□□□□□ -0.43
NUP188-211ENST00000550219 OR5M3Q8NGP4 307 aa12.39□□□□□ -0.43
NUP188-211ENST00000550219 DOK4Q8TEW6 326 aa12.39□□□□□ -0.43
NUP188-211ENST00000550219 DGAT2Q96PD7 388 aa12.39□□□□□ -0.43
NUP188-211ENST00000550219 TMEM120AQ9BXJ8 343 aa12.39□□□□□ -0.43
NUP188-211ENST00000550219 FAM107BQ9H098 131 aa12.39□□□□□ -0.43
NUP188-211ENST00000550219 HRH3Q9Y5N1 445 aa12.39□□□□□ -0.43
NUP188-211ENST00000550219 LIPGQ9Y5X9 500 aa12.39□□□□□ -0.43
NUP188-211ENST00000550219 FBN2P35556 2912 aa12.39□□□□□ -0.43
NUP188-211ENST00000550219 TMPRSS11DO60235 418 aa12.38□□□□□ -0.43
NUP188-211ENST00000550219 FGF17O60258 216 aa12.38□□□□□ -0.43
NUP188-211ENST00000550219 PRKRAO75569 313 aaKnown RBP12.38□□□□□ -0.43
NUP188-211ENST00000550219 ALDOCP09972 364 aaKnown RBP12.38□□□□□ -0.43
NUP188-211ENST00000550219 BCKDHAP12694 445 aa12.38□□□□□ -0.43
NUP188-211ENST00000550219 COX7A2P14406 83 aa12.38□□□□□ -0.43
NUP188-211ENST00000550219 PCSK2P16519 638 aa12.38□□□□□ -0.43
NUP188-211ENST00000550219 MAGEA5P43359 124 aa12.38□□□□□ -0.43
NUP188-211ENST00000550219 GSTM5P46439 218 aa12.38□□□□□ -0.43
NUP188-211ENST00000550219 MRPL19P49406 292 aaKnown RBP12.38□□□□□ -0.43
NUP188-211ENST00000550219 TRA2BP62995 288 aaKnown RBP12.38□□□□□ -0.43
NUP188-211ENST00000550219 RPL38P63173 70 aaKnown RBP12.38□□□□□ -0.43
NUP188-211ENST00000550219 MAD2L1Q13257 205 aaPredicted RBP12.38□□□□□ -0.43
NUP188-211ENST00000550219 METTL21CQ5VZV1 264 aa12.38□□□□□ -0.43
NUP188-211ENST00000550219 NXNQ6DKJ4 435 aa12.38□□□□□ -0.43
NUP188-211ENST00000550219 TMEM211Q6ICI0 200 aa12.38□□□□□ -0.43
NUP188-211ENST00000550219 SLC22A16Q86VW1 577 aa12.38□□□□□ -0.43
NUP188-211ENST00000550219 CCDC71Q8IV32 467 aaPredicted RBP12.38□□□□□ -0.43
NUP188-211ENST00000550219 FNDC5Q8NAU1 212 aa12.38□□□□□ -0.43
NUP188-211ENST00000550219 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.38□□□□□ -0.43
NUP188-211ENST00000550219 ASB5Q8WWX0 329 aa12.38□□□□□ -0.43
NUP188-211ENST00000550219 RND1Q92730 232 aa12.38□□□□□ -0.43
NUP188-211ENST00000550219 CNPPD1Q9BV87 410 aa12.38□□□□□ -0.43
NUP188-211ENST00000550219 PLSCR2Q9NRY7 297 aa12.38□□□□□ -0.43
NUP188-211ENST00000550219 PNPLA3Q9NST1 481 aa12.38□□□□□ -0.43
NUP188-211ENST00000550219 SACM1LQ9NTJ5 587 aa12.38□□□□□ -0.43
NUP188-211ENST00000550219 NOP53Q9NZM5 478 aaKnown RBP12.38□□□□□ -0.43
NUP188-211ENST00000550219 TNFRSF10DQ9UBN6 386 aa12.38□□□□□ -0.43
NUP188-211ENST00000550219 RNF6Q9Y252 685 aa12.38□□□□□ -0.43
NUP188-211ENST00000550219 DLGAP4Q9Y2H0 992 aa12.38□□□□□ -0.43
NUP188-211ENST00000550219 WBP11Q9Y2W2 641 aaKnown RBP12.38□□□□□ -0.43
NUP188-211ENST00000550219 ASB4Q9Y574 426 aa12.38□□□□□ -0.43
NUP188-211ENST00000550219 CSMD1Q96PZ7 3565 aa12.38□□□□□ -0.43
NUP188-211ENST00000550219 PCDH7O60245 1069 aa12.37□□□□□ -0.43
NUP188-211ENST00000550219 ZNF354AO60765 605 aaPredicted RBP12.37□□□□□ -0.43
NUP188-211ENST00000550219 P04436 131 aa12.37□□□□□ -0.43
NUP188-211ENST00000550219 ANXA4P09525 319 aaPredicted RBP12.37□□□□□ -0.43
NUP188-211ENST00000550219 CCL3P10147 92 aa12.37□□□□□ -0.43
NUP188-211ENST00000550219 PRPS2P11908 318 aa12.37□□□□□ -0.43
NUP188-211ENST00000550219 SDC1P18827 310 aa12.37□□□□□ -0.43
NUP188-211ENST00000550219 MAPK1P28482 360 aa12.37□□□□□ -0.43
NUP188-211ENST00000550219 CHRNB4P30926 498 aa12.37□□□□□ -0.43
NUP188-211ENST00000550219 DIO3P55073 304 aa12.37□□□□□ -0.43
NUP188-211ENST00000550219 NUP107P57740 925 aa12.37□□□□□ -0.43
NUP188-211ENST00000550219 IRX1P78414 480 aaPredicted RBP12.37□□□□□ -0.43
NUP188-211ENST00000550219 PLIN5Q00G26 463 aa12.37□□□□□ -0.43
NUP188-211ENST00000550219 TNFRSF17Q02223 184 aa12.37□□□□□ -0.43
NUP188-211ENST00000550219 SLAMF1Q13291 335 aa12.37□□□□□ -0.43
NUP188-211ENST00000550219 CCNYL2Q5T2Q4 361 aa12.37□□□□□ -0.43
NUP188-211ENST00000550219 IL23RQ5VWK5 629 aa12.37□□□□□ -0.43
NUP188-211ENST00000550219 ZNF585AQ6P3V2 769 aa12.37□□□□□ -0.43
NUP188-211ENST00000550219 OPN5Q6U736 354 aa12.37□□□□□ -0.43
NUP188-211ENST00000550219 TMEM251Q8N6I4 163 aa12.37□□□□□ -0.43
NUP188-211ENST00000550219 OR5L2Q8NGL0 311 aa12.37□□□□□ -0.43
NUP188-211ENST00000550219 ZNF721Q8TF20 911 aa12.37□□□□□ -0.43
NUP188-211ENST00000550219 ANKRD9Q96BM1 317 aaPredicted RBP12.37□□□□□ -0.43
NUP188-211ENST00000550219 PPWD1Q96BP3 646 aaKnown RBP12.37□□□□□ -0.43
NUP188-211ENST00000550219 TM4SF18Q96CE8 201 aa12.37□□□□□ -0.43
NUP188-211ENST00000550219 C14orf79Q96F83 325 aa12.37□□□□□ -0.43
NUP188-211ENST00000550219 GAL3ST4Q96RP7 486 aa12.37□□□□□ -0.43
NUP188-211ENST00000550219 SPOCK3Q9BQ16 436 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms