RNA–Protein interactions for RNA: ENST00000549162.5

SCAF11-212, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-212ENST00000549162 PRKCDQ05655 676 aa4.55□□□□□ -1.68
SCAF11-212ENST00000549162 TUBA3CQ13748 450 aa4.55□□□□□ -1.68
SCAF11-212ENST00000549162 EFR3AQ14156 821 aa4.55□□□□□ -1.68
SCAF11-212ENST00000549162 ELAVL1Q15717 326 aaKnown RBP4.55□□□□□ -1.68
SCAF11-212ENST00000549162 ZSCAN26Q16670 478 aa4.55□□□□□ -1.68
SCAF11-212ENST00000549162 HHATQ5VTY9 493 aa4.55□□□□□ -1.68
SCAF11-212ENST00000549162 Q6ZSR6 202 aa4.55□□□□□ -1.68
SCAF11-212ENST00000549162 PRSS48Q7RTY5 328 aa4.55□□□□□ -1.68
SCAF11-212ENST00000549162 GSPT2Q8IYD1 628 aaKnown RBP4.55□□□□□ -1.68
SCAF11-212ENST00000549162 KIAA2013Q8IYS2 634 aa4.55□□□□□ -1.68
SCAF11-212ENST00000549162 ZNF614Q8N883 585 aa4.55□□□□□ -1.68
SCAF11-212ENST00000549162 NEIL2Q969S2 332 aa4.55□□□□□ -1.68
SCAF11-212ENST00000549162 FBXL20Q96IG2 436 aa4.55□□□□□ -1.68
SCAF11-212ENST00000549162 LRR1Q96L50 414 aa4.55□□□□□ -1.68
SCAF11-212ENST00000549162 ACOX2Q99424 681 aa4.55□□□□□ -1.68
SCAF11-212ENST00000549162 SPATA16Q9BXB7 569 aa4.55□□□□□ -1.68
SCAF11-212ENST00000549162 LAT2Q9GZY6 243 aa4.55□□□□□ -1.68
SCAF11-212ENST00000549162 LRRN3Q9H3W5 708 aa4.55□□□□□ -1.68
SCAF11-212ENST00000549162 C6orf106Q9H6K1 298 aaPredicted RBP4.55□□□□□ -1.68
SCAF11-212ENST00000549162 SMURF1Q9HCE7 757 aa4.55□□□□□ -1.68
SCAF11-212ENST00000549162 PLSCR4Q9NRQ2 329 aa4.55□□□□□ -1.68
SCAF11-212ENST00000549162 SEPT10Q9P0V9 454 aa4.55□□□□□ -1.68
SCAF11-212ENST00000549162 CDH22Q9UJ99 828 aa4.55□□□□□ -1.68
SCAF11-212ENST00000549162 A0A087X0M5 115 aa4.55□□□□□ -1.68
SCAF11-212ENST00000549162 A0A1B0GX30 115 aa4.55□□□□□ -1.68
SCAF11-212ENST00000549162 MAGEA13PA6NCF6 341 aa4.55□□□□□ -1.68
SCAF11-212ENST00000549162 DUXAA6NLW8 204 aa4.55□□□□□ -1.68
SCAF11-212ENST00000549162 H0Y8X5 98 aa4.55□□□□□ -1.68
SCAF11-212ENST00000549162 M0R3G1 203 aa4.55□□□□□ -1.68
SCAF11-212ENST00000549162 MASP2O00187 686 aa4.55□□□□□ -1.68
SCAF11-212ENST00000549162 LGI1O95970 557 aa4.55□□□□□ -1.68
SCAF11-212ENST00000549162 GFAPP14136 432 aa4.55□□□□□ -1.68
SCAF11-212ENST00000549162 GNSP15586 552 aa4.55□□□□□ -1.68
SCAF11-212ENST00000549162 ZNF26P17031 533 aaPredicted RBP4.55□□□□□ -1.68
SCAF11-212ENST00000549162 SLC25A1P53007 311 aa4.55□□□□□ -1.68
SCAF11-212ENST00000549162 LIM2P55344 173 aa4.55□□□□□ -1.68
SCAF11-212ENST00000549162 MAXP61244 160 aa4.55□□□□□ -1.68
SCAF11-212ENST00000549162 FOXC1Q12948 553 aa4.55□□□□□ -1.68
SCAF11-212ENST00000549162 HEPACAMQ14CZ8 416 aa4.55□□□□□ -1.68
SCAF11-212ENST00000549162 ABRAXAS2Q15018 415 aa4.55□□□□□ -1.68
SCAF11-212ENST00000549162 EIF2S3LQ2VIR3 472 aaKnown RBP4.55□□□□□ -1.68
SCAF11-212ENST00000549162 PLAG1Q6DJT9 500 aa4.55□□□□□ -1.68
SCAF11-212ENST00000549162 C1orf94Q6P1W5 598 aa4.55□□□□□ -1.68
SCAF11-212ENST00000549162 ZNF551Q7Z340 670 aaPredicted RBP4.55□□□□□ -1.68
SCAF11-212ENST00000549162 CHERPQ8IWX8 916 aaKnown RBP4.55□□□□□ -1.68
SCAF11-212ENST00000549162 SLC15A3Q8IY34 581 aa4.55□□□□□ -1.68
SCAF11-212ENST00000549162 KYQ8NBH2 561 aa4.55□□□□□ -1.68
SCAF11-212ENST00000549162 SLC13A3Q8WWT9 602 aa4.55□□□□□ -1.68
SCAF11-212ENST00000549162 MYLIPQ8WY64 445 aa4.55□□□□□ -1.68
SCAF11-212ENST00000549162 PHYHIPQ92561 330 aa4.55□□□□□ -1.68
SCAF11-212ENST00000549162 FBXW5Q969U6 566 aa4.55□□□□□ -1.68
SCAF11-212ENST00000549162 LRRC37BQ96QE4 947 aa4.55□□□□□ -1.68
SCAF11-212ENST00000549162 CGREF1Q99674 301 aa4.55□□□□□ -1.68
SCAF11-212ENST00000549162 FAIM2Q9BWQ8 316 aa4.55□□□□□ -1.68
SCAF11-212ENST00000549162 CMTM6Q9NX76 183 aa4.55□□□□□ -1.68
SCAF11-212ENST00000549162 NEMP2A6NFY4 417 aa4.54□□□□□ -1.68
SCAF11-212ENST00000549162 TMEM202A6NGA9 273 aa4.54□□□□□ -1.68
SCAF11-212ENST00000549162 C1QTNF9BB2RNN3 333 aa4.54□□□□□ -1.68
SCAF11-212ENST00000549162 E9PBE3 544 aa4.54□□□□□ -1.68
SCAF11-212ENST00000549162 PDLIM1O00151 329 aa4.54□□□□□ -1.68
SCAF11-212ENST00000549162 AIM2O14862 343 aa4.54□□□□□ -1.68
SCAF11-212ENST00000549162 EMC8O43402 210 aa4.54□□□□□ -1.68
SCAF11-212ENST00000549162 EPPINO95925 133 aa4.54□□□□□ -1.68
SCAF11-212ENST00000549162 TGFB1P01137 390 aa4.54□□□□□ -1.68
SCAF11-212ENST00000549162 HPNP05981 417 aa4.54□□□□□ -1.68
SCAF11-212ENST00000549162 FHP07954 510 aa4.54□□□□□ -1.68
SCAF11-212ENST00000549162 SLC2A5P22732 501 aa4.54□□□□□ -1.68
SCAF11-212ENST00000549162 CSF2RBP32927 897 aa4.54□□□□□ -1.68
SCAF11-212ENST00000549162 TNNT3P45378 269 aaPredicted RBP4.54□□□□□ -1.68
SCAF11-212ENST00000549162 ALDH3B2P48448 385 aa4.54□□□□□ -1.68
SCAF11-212ENST00000549162 VPS41P49754 854 aa4.54□□□□□ -1.68
SCAF11-212ENST00000549162 SESN2P58004 480 aaPredicted RBP4.54□□□□□ -1.68
SCAF11-212ENST00000549162 CCL7P80098 99 aa4.54□□□□□ -1.68
SCAF11-212ENST00000549162 PTCHD3Q3KNS1 767 aa4.54□□□□□ -1.68
SCAF11-212ENST00000549162 FBXL19-AS1Q494R0 122 aa4.54□□□□□ -1.68
SCAF11-212ENST00000549162 CACHD1Q5VU97 1274 aa4.54□□□□□ -1.68
SCAF11-212ENST00000549162 TMC5Q6UXY8 1006 aa4.54□□□□□ -1.68
SCAF11-212ENST00000549162 TMIGD1Q6UXZ0 262 aa4.54□□□□□ -1.68
SCAF11-212ENST00000549162 ZNF793Q6ZN11 406 aa4.54□□□□□ -1.68
SCAF11-212ENST00000549162 SPATA6LQ8N4H0 392 aa4.54□□□□□ -1.68
SCAF11-212ENST00000549162 MGARPQ8TDB4 240 aa4.54□□□□□ -1.68
SCAF11-212ENST00000549162 HS6ST2Q96MM7 605 aa4.54□□□□□ -1.68
SCAF11-212ENST00000549162 ANGPTL4Q9BY76 406 aa4.54□□□□□ -1.68
SCAF11-212ENST00000549162 NCOR1P1Q9H4R4 102 aa4.54□□□□□ -1.68
SCAF11-212ENST00000549162 RNPEPL1Q9HAU8 725 aa4.54□□□□□ -1.68
SCAF11-212ENST00000549162 S100A14Q9HCY8 104 aa4.54□□□□□ -1.68
SCAF11-212ENST00000549162 FGF20Q9NP95 211 aaPredicted RBP4.54□□□□□ -1.68
SCAF11-212ENST00000549162 ASCL3Q9NQ33 180 aa4.54□□□□□ -1.68
SCAF11-212ENST00000549162 PAK1IP1Q9NWT1 392 aaPredicted RBP4.54□□□□□ -1.68
SCAF11-212ENST00000549162 GFOD1Q9NXC2 390 aa4.54□□□□□ -1.68
SCAF11-212ENST00000549162 JKAMPQ9P055 326 aa4.54□□□□□ -1.68
SCAF11-212ENST00000549162 APOBEC3BQ9UH17 382 aaKnown RBP4.54□□□□□ -1.68
SCAF11-212ENST00000549162 SLC35A3Q9Y2D2 325 aa4.54□□□□□ -1.68
SCAF11-212ENST00000549162 CCDC154A6NI56 674 aa4.54□□□□□ -1.68
SCAF11-212ENST00000549162 PIP5K1BO14986 540 aa4.54□□□□□ -1.68
SCAF11-212ENST00000549162 UPP2O95045 317 aa4.54□□□□□ -1.68
SCAF11-212ENST00000549162 MFN2O95140 757 aa4.54□□□□□ -1.68
SCAF11-212ENST00000549162 VIMP08670 466 aaKnown RBP4.54□□□□□ -1.68
SCAF11-212ENST00000549162 KHKP50053 298 aa4.54□□□□□ -1.68
SCAF11-212ENST00000549162 CDH13P55290 713 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms