RNA–Protein interactions for RNA: ENST00000548825.6

PRPF40B-209, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRPF40B, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-209ENST00000548825 A0A1W2PR48 441 aa12.89□□□□□ -0.35
PRPF40B-209ENST00000548825 PRKNO60260 465 aaPredicted RBP12.89□□□□□ -0.35
PRPF40B-209ENST00000548825 MRPL3P09001 348 aaKnown RBP12.89□□□□□ -0.35
PRPF40B-209ENST00000548825 CELP19835 753 aa12.89□□□□□ -0.35
PRPF40B-209ENST00000548825 TGM3Q08188 693 aa12.89□□□□□ -0.35
PRPF40B-209ENST00000548825 MLF2Q15773 248 aaPredicted RBP12.89□□□□□ -0.35
PRPF40B-209ENST00000548825 WFIKKN2Q8TEU8 576 aa12.89□□□□□ -0.35
PRPF40B-209ENST00000548825 CLIP3Q96DZ5 547 aa12.89□□□□□ -0.35
PRPF40B-209ENST00000548825 VMP1Q96GC9 406 aa12.89□□□□□ -0.35
PRPF40B-209ENST00000548825 AMDHD1Q96NU7 426 aa12.89□□□□□ -0.35
PRPF40B-209ENST00000548825 HHIPQ96QV1 700 aa12.89□□□□□ -0.35
PRPF40B-209ENST00000548825 SLC30A2Q9BRI3 323 aa12.89□□□□□ -0.35
PRPF40B-209ENST00000548825 OR51V1Q9H2C8 321 aa12.89□□□□□ -0.35
PRPF40B-209ENST00000548825 TMEM38AQ9H6F2 299 aa12.89□□□□□ -0.35
PRPF40B-209ENST00000548825 MED20Q9H944 212 aa12.89□□□□□ -0.35
PRPF40B-209ENST00000548825 TDRD6O60522 2096 aaKnown RBP12.89□□□□□ -0.35
PRPF40B-209ENST00000548825 POM121BA6NF01 834 aa12.88□□□□□ -0.35
PRPF40B-209ENST00000548825 C4orf51C9J302 202 aa12.88□□□□□ -0.35
PRPF40B-209ENST00000548825 NPIPB8E9PQR5 432 aa12.88□□□□□ -0.35
PRPF40B-209ENST00000548825 H3BSH0 61 aa12.88□□□□□ -0.35
PRPF40B-209ENST00000548825 CASKO14936 926 aa12.88□□□□□ -0.35
PRPF40B-209ENST00000548825 VEGFDO43915 354 aa12.88□□□□□ -0.35
PRPF40B-209ENST00000548825 LDB3O75112 727 aa12.88□□□□□ -0.35
PRPF40B-209ENST00000548825 PDE9AO76083 593 aa12.88□□□□□ -0.35
PRPF40B-209ENST00000548825 KCNK2O95069 426 aa12.88□□□□□ -0.35
PRPF40B-209ENST00000548825 SLC2A10O95528 541 aa12.88□□□□□ -0.35
PRPF40B-209ENST00000548825 SDC2P34741 201 aa12.88□□□□□ -0.35
PRPF40B-209ENST00000548825 SOX18P35713 384 aa12.88□□□□□ -0.35
PRPF40B-209ENST00000548825 INPP1P49441 399 aa12.88□□□□□ -0.35
PRPF40B-209ENST00000548825 SNRPNP63162 240 aaKnown RBP12.88□□□□□ -0.35
PRPF40B-209ENST00000548825 KCNJ8Q15842 424 aa12.88□□□□□ -0.35
PRPF40B-209ENST00000548825 PDZK1Q5T2W1 519 aa12.88□□□□□ -0.35
PRPF40B-209ENST00000548825 LCTLQ6UWM7 567 aa12.88□□□□□ -0.35
PRPF40B-209ENST00000548825 FBLIM1Q8WUP2 373 aa12.88□□□□□ -0.35
PRPF40B-209ENST00000548825 NEURL3Q96EH8 262 aa12.88□□□□□ -0.35
PRPF40B-209ENST00000548825 CACYBPQ9HB71 228 aaKnown RBP12.88□□□□□ -0.35
PRPF40B-209ENST00000548825 GIMAP4Q9NUV9 329 aa12.88□□□□□ -0.35
PRPF40B-209ENST00000548825 H2AFY2Q9P0M6 372 aaPredicted RBP12.88□□□□□ -0.35
PRPF40B-209ENST00000548825 KMOO15229 486 aa12.88□□□□□ -0.35
PRPF40B-209ENST00000548825 EFCAB14O75071 495 aa12.88□□□□□ -0.35
PRPF40B-209ENST00000548825 AIFM1O95831 613 aa12.88□□□□□ -0.35
PRPF40B-209ENST00000548825 RECKO95980 971 aa12.88□□□□□ -0.35
PRPF40B-209ENST00000548825 GNSP15586 552 aa12.88□□□□□ -0.35
PRPF40B-209ENST00000548825 POLR2CP19387 275 aaPredicted RBP12.88□□□□□ -0.35
PRPF40B-209ENST00000548825 NCF4Q15080 339 aa12.88□□□□□ -0.35
PRPF40B-209ENST00000548825 SLC30A8Q8IWU4 369 aa12.88□□□□□ -0.35
PRPF40B-209ENST00000548825 BBS10Q8TAM1 723 aa12.88□□□□□ -0.35
PRPF40B-209ENST00000548825 OTUB2Q96DC9 234 aa12.88□□□□□ -0.35
PRPF40B-209ENST00000548825 CNRIP1Q96F85 164 aaPredicted RBP12.88□□□□□ -0.35
PRPF40B-209ENST00000548825 ZNF354BQ96LW1 612 aa12.88□□□□□ -0.35
PRPF40B-209ENST00000548825 NECTIN4Q96NY8 510 aa12.88□□□□□ -0.35
PRPF40B-209ENST00000548825 GFM1Q96RP9 751 aaKnown RBP12.88□□□□□ -0.35
PRPF40B-209ENST00000548825 LHX9Q9NQ69 397 aa12.88□□□□□ -0.35
PRPF40B-209ENST00000548825 KLHL1Q9NR64 748 aa12.88□□□□□ -0.35
PRPF40B-209ENST00000548825 SIRT3Q9NTG7 399 aaPredicted RBP12.88□□□□□ -0.35
PRPF40B-209ENST00000548825 MAT2BQ9NZL9 334 aa12.88□□□□□ -0.35
PRPF40B-209ENST00000548825 MUTYHQ9UIF7 546 aa12.88□□□□□ -0.35
PRPF40B-209ENST00000548825 ZNF780BQ9Y6R6 833 aa12.88□□□□□ -0.35
PRPF40B-209ENST00000548825 OR2W5A6NFC9 320 aa12.88□□□□□ -0.35
PRPF40B-209ENST00000548825 CD8B2A6NJW9 211 aa12.88□□□□□ -0.35
PRPF40B-209ENST00000548825 DNAJB6O75190 326 aa12.88□□□□□ -0.35
PRPF40B-209ENST00000548825 HBQ1P09105 142 aa12.88□□□□□ -0.35
PRPF40B-209ENST00000548825 CD8BP10966 210 aa12.88□□□□□ -0.35
PRPF40B-209ENST00000548825 IMPDH2P12268 514 aa12.88□□□□□ -0.35
PRPF40B-209ENST00000548825 DRD3P35462 400 aa12.88□□□□□ -0.35
PRPF40B-209ENST00000548825 ETV5P41161 510 aa12.88□□□□□ -0.35
PRPF40B-209ENST00000548825 MAPK9P45984 424 aa12.88□□□□□ -0.35
PRPF40B-209ENST00000548825 ETV1P50549 477 aa12.88□□□□□ -0.35
PRPF40B-209ENST00000548825 CSNK2BP67870 215 aa12.88□□□□□ -0.35
PRPF40B-209ENST00000548825 TFF2Q03403 129 aa12.88□□□□□ -0.35
PRPF40B-209ENST00000548825 RUNX3Q13761 415 aa12.88□□□□□ -0.35
PRPF40B-209ENST00000548825 TIMM50Q3ZCQ8 353 aa12.88□□□□□ -0.35
PRPF40B-209ENST00000548825 FIGNL1Q6PIW4 674 aa12.88□□□□□ -0.35
PRPF40B-209ENST00000548825 UBE3DQ7Z6J8 389 aa12.88□□□□□ -0.35
PRPF40B-209ENST00000548825 LRRC56Q8IYG6 542 aaPredicted RBP12.88□□□□□ -0.35
PRPF40B-209ENST00000548825 NUP43Q8NFH3 380 aa12.88□□□□□ -0.35
PRPF40B-209ENST00000548825 GRHL3Q8TE85 626 aa12.88□□□□□ -0.35
PRPF40B-209ENST00000548825 CXorf40BQ96DE9 158 aa12.88□□□□□ -0.35
PRPF40B-209ENST00000548825 ASB16Q96NS5 453 aa12.88□□□□□ -0.35
PRPF40B-209ENST00000548825 OPALINQ96PE5 141 aa12.88□□□□□ -0.35
PRPF40B-209ENST00000548825 ZAR1LA6NP61 321 aa12.87□□□□□ -0.35
PRPF40B-209ENST00000548825 SOBPA7XYQ1 873 aa12.87□□□□□ -0.35
PRPF40B-209ENST00000548825 PIP5K1CO60331 668 aa12.87□□□□□ -0.35
PRPF40B-209ENST00000548825 HOXB6P17509 224 aaKnown RBP12.87□□□□□ -0.35
PRPF40B-209ENST00000548825 EN2P19622 333 aaPredicted RBP12.87□□□□□ -0.35
PRPF40B-209ENST00000548825 RAB28P51157 221 aa12.87□□□□□ -0.35
PRPF40B-209ENST00000548825 TUBA1BP68363 451 aa12.87□□□□□ -0.35
PRPF40B-209ENST00000548825 EEF1A2Q05639 463 aaKnown RBP12.87□□□□□ -0.35
PRPF40B-209ENST00000548825 PDE7AQ13946 482 aa12.87□□□□□ -0.35
PRPF40B-209ENST00000548825 FGL2Q14314 439 aa12.87□□□□□ -0.35
PRPF40B-209ENST00000548825 DEFB110Q30KQ9 67 aa12.87□□□□□ -0.35
PRPF40B-209ENST00000548825 METRNLQ641Q3 311 aa12.87□□□□□ -0.35
PRPF40B-209ENST00000548825 TUBA1AQ71U36 451 aa12.87□□□□□ -0.35
PRPF40B-209ENST00000548825 GPR155Q7Z3F1 870 aa12.87□□□□□ -0.35
PRPF40B-209ENST00000548825 LAPTM4BQ86VI4 370 aa12.87□□□□□ -0.35
PRPF40B-209ENST00000548825 NKAIN4Q8IVV8 208 aa12.87□□□□□ -0.35
PRPF40B-209ENST00000548825 NRMQ8IXM6 262 aa12.87□□□□□ -0.35
PRPF40B-209ENST00000548825 SLC16A11Q8NCK7 471 aa12.87□□□□□ -0.35
PRPF40B-209ENST00000548825 OR51G2Q8NGK0 314 aa12.87□□□□□ -0.35
PRPF40B-209ENST00000548825 SETD7Q8WTS6 366 aaKnown RBP12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 297.7 ms