RNA–Protein interactions for RNA: ENST00000548658.1

BEST3-209, Transcript of bestrophin 3, humanhuman

TSL 5

Gene BEST3, Length 572 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-209ENST00000548658 CCDC116Q8IYX3 515 aa10.45□□□□□ -0.74
BEST3-209ENST00000548658 MARVELD2Q8N4S9 558 aa10.45□□□□□ -0.74
BEST3-209ENST00000548658 CCDC63Q8NA47 563 aa10.45□□□□□ -0.74
BEST3-209ENST00000548658 OR5M9Q8NGP3 310 aa10.45□□□□□ -0.74
BEST3-209ENST00000548658 OR10Q1Q8NGQ4 319 aa10.45□□□□□ -0.74
BEST3-209ENST00000548658 NEIL3Q8TAT5 605 aa10.45□□□□□ -0.74
BEST3-209ENST00000548658 C16orf78Q8WTQ4 265 aa10.45□□□□□ -0.74
BEST3-209ENST00000548658 DTNBP1Q96EV8 351 aa10.45□□□□□ -0.74
BEST3-209ENST00000548658 C11orf24Q96F05 449 aaPredicted RBP10.45□□□□□ -0.74
BEST3-209ENST00000548658 APIPQ96GX9 242 aa10.45□□□□□ -0.74
BEST3-209ENST00000548658 TMEM41AQ96HV5 264 aa10.45□□□□□ -0.74
BEST3-209ENST00000548658 RILPQ96NA2 401 aa10.45□□□□□ -0.74
BEST3-209ENST00000548658 TTYH2Q9BSA4 534 aa10.45□□□□□ -0.74
BEST3-209ENST00000548658 IQCGQ9H095 443 aaKnown RBP10.45□□□□□ -0.74
BEST3-209ENST00000548658 ENKD1Q9H0I2 346 aa10.45□□□□□ -0.74
BEST3-209ENST00000548658 STMN4Q9H169 189 aaPredicted RBP10.45□□□□□ -0.74
BEST3-209ENST00000548658 NXF5Q9H1B4 397 aaKnown RBP10.45□□□□□ -0.74
BEST3-209ENST00000548658 SLC24A3Q9HC58 644 aa10.45□□□□□ -0.74
BEST3-209ENST00000548658 SLC35C2Q9NQQ7 365 aa10.45□□□□□ -0.74
BEST3-209ENST00000548658 OXSMQ9NWU1 459 aa10.45□□□□□ -0.74
BEST3-209ENST00000548658 EMCNQ9ULC0 261 aa10.45□□□□□ -0.74
BEST3-209ENST00000548658 TEX15Q9BXT5 2789 aa10.45□□□□□ -0.74
BEST3-209ENST00000548658 PKDREJQ9NTG1 2253 aa10.44□□□□□ -0.74
BEST3-209ENST00000548658 FRG2CA6NGY1 282 aa10.44□□□□□ -0.74
BEST3-209ENST00000548658 LRRC3CA6NJW4 275 aa10.44□□□□□ -0.74
BEST3-209ENST00000548658 SMIM23A6NLE4 172 aa10.44□□□□□ -0.74
BEST3-209ENST00000548658 AHRRA9YTQ3 701 aa10.44□□□□□ -0.74
BEST3-209ENST00000548658 TO15178 435 aa10.44□□□□□ -0.74
BEST3-209ENST00000548658 TRAPPC6AO75865 159 aa10.44□□□□□ -0.74
BEST3-209ENST00000548658 RSL1D1O76021 490 aaKnown RBP10.44□□□□□ -0.74
BEST3-209ENST00000548658 SHBGP04278 402 aa10.44□□□□□ -0.74
BEST3-209ENST00000548658 ABCB1P08183 1280 aaPredicted RBP10.44□□□□□ -0.74
BEST3-209ENST00000548658 CELA3AP09093 270 aa10.44□□□□□ -0.74
BEST3-209ENST00000548658 UROSP10746 265 aa10.44□□□□□ -0.74
BEST3-209ENST00000548658 PRF1P14222 555 aa10.44□□□□□ -0.74
BEST3-209ENST00000548658 CHN1P15882 459 aa10.44□□□□□ -0.74
BEST3-209ENST00000548658 DDCP20711 480 aa10.44□□□□□ -0.74
BEST3-209ENST00000548658 GCKP35557 465 aa10.44□□□□□ -0.74
BEST3-209ENST00000548658 ZFP36L2P47974 494 aaKnown RBP10.44□□□□□ -0.74
BEST3-209ENST00000548658 RAE1P78406 368 aaKnown RBP10.44□□□□□ -0.74
BEST3-209ENST00000548658 BTKQ06187 659 aa10.44□□□□□ -0.74
BEST3-209ENST00000548658 ZNF763Q0D2J5 394 aa10.44□□□□□ -0.74
BEST3-209ENST00000548658 EXOSC7Q15024 291 aaKnown RBP10.44□□□□□ -0.74
BEST3-209ENST00000548658 CDSNQ15517 529 aa10.44□□□□□ -0.74
BEST3-209ENST00000548658 CEBPEQ15744 281 aa10.44□□□□□ -0.74
BEST3-209ENST00000548658 ERCC6LQ2NKX8 1250 aa10.44□□□□□ -0.74
BEST3-209ENST00000548658 TRMT12Q53H54 448 aaKnown RBP10.44□□□□□ -0.74
BEST3-209ENST00000548658 LIPMQ5VYY2 423 aa10.44□□□□□ -0.74
BEST3-209ENST00000548658 TMEM64Q6YI46 380 aa10.44□□□□□ -0.74
BEST3-209ENST00000548658 NCCRP1Q6ZVX7 275 aaPredicted RBP10.44□□□□□ -0.74
BEST3-209ENST00000548658 SRRM1Q8IYB3 904 aaKnown RBP10.44□□□□□ -0.74
BEST3-209ENST00000548658 PM20D2Q8IYS1 436 aa10.44□□□□□ -0.74
BEST3-209ENST00000548658 MMP21Q8N119 569 aa10.44□□□□□ -0.74
BEST3-209ENST00000548658 RIBC1Q8N443 379 aaPredicted RBP10.44□□□□□ -0.74
BEST3-209ENST00000548658 ADCY4Q8NFM4 1077 aa10.44□□□□□ -0.74
BEST3-209ENST00000548658 OR52R1Q8NGF1 315 aa10.44□□□□□ -0.74
BEST3-209ENST00000548658 EXOSC8Q96B26 276 aaKnown RBP10.44□□□□□ -0.74
BEST3-209ENST00000548658 TMCO6Q96DC7 493 aa10.44□□□□□ -0.74
BEST3-209ENST00000548658 C14orf79Q96F83 325 aa10.44□□□□□ -0.74
BEST3-209ENST00000548658 BBS4Q96RK4 519 aa10.44□□□□□ -0.74
BEST3-209ENST00000548658 KCNA7Q96RP8 456 aa10.44□□□□□ -0.74
BEST3-209ENST00000548658 TRMOQ9BU70 441 aa10.44□□□□□ -0.74
BEST3-209ENST00000548658 ITPAQ9BY32 194 aa10.44□□□□□ -0.74
BEST3-209ENST00000548658 METTL7AQ9H8H3 244 aa10.44□□□□□ -0.74
BEST3-209ENST00000548658 MIEF1Q9NQG6 463 aa10.44□□□□□ -0.74
BEST3-209ENST00000548658 ALKBH4Q9NXW9 302 aa10.44□□□□□ -0.74
BEST3-209ENST00000548658 TAS2R9Q9NYW1 312 aa10.44□□□□□ -0.74
BEST3-209ENST00000548658 TAS2R7Q9NYW3 318 aa10.44□□□□□ -0.74
BEST3-209ENST00000548658 SENP1Q9P0U3 644 aa10.44□□□□□ -0.74
BEST3-209ENST00000548658 HEY2Q9UBP5 337 aa10.44□□□□□ -0.74
BEST3-209ENST00000548658 RNF6Q9Y252 685 aa10.44□□□□□ -0.74
BEST3-209ENST00000548658 GPR55Q9Y2T6 319 aaPredicted RBP10.44□□□□□ -0.74
BEST3-209ENST00000548658 PLLPQ9Y342 182 aa10.44□□□□□ -0.74
BEST3-209ENST00000548658 LIPGQ9Y5X9 500 aa10.44□□□□□ -0.74
BEST3-209ENST00000548658 CACNA1CQ13936 2221 aa10.43□□□□□ -0.74
BEST3-209ENST00000548658 PHF3Q92576 2039 aaKnown RBP10.43□□□□□ -0.74
BEST3-209ENST00000548658 C15orf38-AP3S2A0A0A6YYH1 394 aa10.43□□□□□ -0.74
BEST3-209ENST00000548658 OR6C70A6NIJ9 312 aa10.43□□□□□ -0.74
BEST3-209ENST00000548658 UBFD1O14562 309 aaKnown RBP10.43□□□□□ -0.74
BEST3-209ENST00000548658 PLOD3O60568 738 aa10.43□□□□□ -0.74
BEST3-209ENST00000548658 TRIM13O60858 407 aa10.43□□□□□ -0.74
BEST3-209ENST00000548658 CBX7O95931 251 aa10.43□□□□□ -0.74
BEST3-209ENST00000548658 HPNP05981 417 aa10.43□□□□□ -0.74
BEST3-209ENST00000548658 SNRPB2P08579 225 aaKnown RBP10.43□□□□□ -0.74
BEST3-209ENST00000548658 KRT20P35900 424 aa10.43□□□□□ -0.74
BEST3-209ENST00000548658 KIR3DL1P43629 444 aa10.43□□□□□ -0.74
BEST3-209ENST00000548658 EMDP50402 254 aa10.43□□□□□ -0.74
BEST3-209ENST00000548658 HTR6P50406 440 aa10.43□□□□□ -0.74
BEST3-209ENST00000548658 NUP107P57740 925 aa10.43□□□□□ -0.74
BEST3-209ENST00000548658 MRPS22P82650 360 aaKnown RBP10.43□□□□□ -0.74
BEST3-209ENST00000548658 MRPS35P82673 323 aaKnown RBP10.43□□□□□ -0.74
BEST3-209ENST00000548658 SLC18A2Q05940 514 aa10.43□□□□□ -0.74
BEST3-209ENST00000548658 C2orf80Q0P641 193 aa10.43□□□□□ -0.74
BEST3-209ENST00000548658 PLCXD2Q0VAA5 305 aa10.43□□□□□ -0.74
BEST3-209ENST00000548658 DUSP8Q13202 625 aa10.43□□□□□ -0.74
BEST3-209ENST00000548658 ZNF628Q5EBL2 1059 aa10.43□□□□□ -0.74
BEST3-209ENST00000548658 C1orf185Q5T7R7 199 aa10.43□□□□□ -0.74
BEST3-209ENST00000548658 TIGD3Q6B0B8 471 aa10.43□□□□□ -0.74
BEST3-209ENST00000548658 IKBIPQ70UQ0 350 aa10.43□□□□□ -0.74
BEST3-209ENST00000548658 FAM9CQ8IZT9 166 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms