RNA–Protein interactions for RNA: ENST00000547486.1

CPSF6-204, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2

Gene CPSF6, Length 872 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-204ENST00000547486 ATP5F1P24539 256 aaPredicted RBP12.19□□□□□ -0.46
CPSF6-204ENST00000547486 PTPN6P29350 595 aa12.19□□□□□ -0.46
CPSF6-204ENST00000547486 CEACAM8P31997 349 aaPredicted RBP12.19□□□□□ -0.46
CPSF6-204ENST00000547486 MASP1P48740 699 aa12.19□□□□□ -0.46
CPSF6-204ENST00000547486 TMED10P49755 219 aaKnown RBP12.19□□□□□ -0.46
CPSF6-204ENST00000547486 PRKAA2P54646 552 aa12.19□□□□□ -0.46
CPSF6-204ENST00000547486 HMGCS1Q01581 520 aa12.19□□□□□ -0.46
CPSF6-204ENST00000547486 SLC29A2Q14542 456 aa12.19□□□□□ -0.46
CPSF6-204ENST00000547486 RASA2Q15283 850 aa12.19□□□□□ -0.46
CPSF6-204ENST00000547486 PRSS53Q2L4Q9 553 aa12.19□□□□□ -0.46
CPSF6-204ENST00000547486 SLC25A35Q3KQZ1 300 aa12.19□□□□□ -0.46
CPSF6-204ENST00000547486 ACSF3Q4G176 576 aaPredicted RBP12.19□□□□□ -0.46
CPSF6-204ENST00000547486 WIPI1Q5MNZ9 446 aaPredicted RBP12.19□□□□□ -0.46
CPSF6-204ENST00000547486 DCST1Q5T197 706 aa12.19□□□□□ -0.46
CPSF6-204ENST00000547486 C6orf163Q5TEZ5 329 aa12.19□□□□□ -0.46
CPSF6-204ENST00000547486 SCIMPQ6UWF3 145 aa12.19□□□□□ -0.46
CPSF6-204ENST00000547486 GPRIN3Q6ZVF9 776 aa12.19□□□□□ -0.46
CPSF6-204ENST00000547486 NUP54Q7Z3B4 507 aa12.19□□□□□ -0.46
CPSF6-204ENST00000547486 WDR53Q7Z5U6 358 aaPredicted RBP12.19□□□□□ -0.46
CPSF6-204ENST00000547486 CLYBLQ8N0X4 340 aa12.19□□□□□ -0.46
CPSF6-204ENST00000547486 RELL2Q8NC24 303 aaPredicted RBP12.19□□□□□ -0.46
CPSF6-204ENST00000547486 METTL6Q8TCB7 284 aa12.19□□□□□ -0.46
CPSF6-204ENST00000547486 MZB1Q8WU39 189 aa12.19□□□□□ -0.46
CPSF6-204ENST00000547486 NRGNQ92686 78 aa12.19□□□□□ -0.46
CPSF6-204ENST00000547486 OMA1Q96E52 524 aa12.19□□□□□ -0.46
CPSF6-204ENST00000547486 APIPQ96GX9 242 aa12.19□□□□□ -0.46
CPSF6-204ENST00000547486 TMEM41AQ96HV5 264 aa12.19□□□□□ -0.46
CPSF6-204ENST00000547486 LCORQ96JN0 433 aaPredicted RBP12.19□□□□□ -0.46
CPSF6-204ENST00000547486 KCNA7Q96RP8 456 aa12.19□□□□□ -0.46
CPSF6-204ENST00000547486 GALNT9Q9HCQ5 603 aa12.19□□□□□ -0.46
CPSF6-204ENST00000547486 EHD3Q9NZN3 535 aa12.19□□□□□ -0.46
CPSF6-204ENST00000547486 MCM8Q9UJA3 840 aa12.19□□□□□ -0.46
CPSF6-204ENST00000547486 UTS2RQ9UKP6 389 aa12.19□□□□□ -0.46
CPSF6-204ENST00000547486 DLGAP4Q9Y2H0 992 aa12.19□□□□□ -0.46
CPSF6-204ENST00000547486 L3MBTL1Q9Y468 752 aa12.19□□□□□ -0.46
CPSF6-204ENST00000547486 TIMM22Q9Y584 194 aa12.19□□□□□ -0.46
CPSF6-204ENST00000547486 ZNF780BQ9Y6R6 833 aa12.19□□□□□ -0.46
CPSF6-204ENST00000547486 A0A1W2PPM1 405 aa12.18□□□□□ -0.46
CPSF6-204ENST00000547486 HSPB2A8KAH6 182 aa12.18□□□□□ -0.46
CPSF6-204ENST00000547486 FAM47E-STBD1D6RA91 191 aa12.18□□□□□ -0.46
CPSF6-204ENST00000547486 UBFD1O14562 309 aaKnown RBP12.18□□□□□ -0.46
CPSF6-204ENST00000547486 ICOSLGO75144 302 aa12.18□□□□□ -0.46
CPSF6-204ENST00000547486 KRT6AP02538 564 aa12.18□□□□□ -0.46
CPSF6-204ENST00000547486 KRT6BP04259 564 aa12.18□□□□□ -0.46
CPSF6-204ENST00000547486 PYGBP11216 843 aa12.18□□□□□ -0.46
CPSF6-204ENST00000547486 HSD3B1P14060 373 aa12.18□□□□□ -0.46
CPSF6-204ENST00000547486 KRT15P19012 456 aa12.18□□□□□ -0.46
CPSF6-204ENST00000547486 HSD3B2P26439 372 aa12.18□□□□□ -0.46
CPSF6-204ENST00000547486 PPICP45877 212 aa12.18□□□□□ -0.46
CPSF6-204ENST00000547486 KRT6CP48668 564 aa12.18□□□□□ -0.46
CPSF6-204ENST00000547486 NAGLUP54802 743 aa12.18□□□□□ -0.46
CPSF6-204ENST00000547486 CSTF3Q12996 717 aaKnown RBP12.18□□□□□ -0.46
CPSF6-204ENST00000547486 MYBPHQ13203 477 aa12.18□□□□□ -0.46
CPSF6-204ENST00000547486 TOMM20Q15388 145 aa12.18□□□□□ -0.46
CPSF6-204ENST00000547486 HSPB2Q16082 182 aa12.18□□□□□ -0.46
CPSF6-204ENST00000547486 ZNF628Q5EBL2 1059 aa12.18□□□□□ -0.46
CPSF6-204ENST00000547486 NHSL2Q5HYW2 709 aa12.18□□□□□ -0.46
CPSF6-204ENST00000547486 CES4AQ5XG92 561 aa12.18□□□□□ -0.46
CPSF6-204ENST00000547486 ARSKQ6UWY0 536 aa12.18□□□□□ -0.46
CPSF6-204ENST00000547486 ANGPTL8Q6UXH0 198 aa12.18□□□□□ -0.46
CPSF6-204ENST00000547486 YRDCQ86U90 279 aaKnown RBP12.18□□□□□ -0.46
CPSF6-204ENST00000547486 LCA5Q86VQ0 697 aa12.18□□□□□ -0.46
CPSF6-204ENST00000547486 IFT20Q8IY31 132 aa12.18□□□□□ -0.46
CPSF6-204ENST00000547486 KAT2AQ92830 837 aa12.18□□□□□ -0.46
CPSF6-204ENST00000547486 L3HYPDHQ96EM0 354 aa12.18□□□□□ -0.46
CPSF6-204ENST00000547486 HSPBAP1Q96EW2 488 aa12.18□□□□□ -0.46
CPSF6-204ENST00000547486 C11orf24Q96F05 449 aaPredicted RBP12.18□□□□□ -0.46
CPSF6-204ENST00000547486 WDYHV1Q96HA8 205 aa12.18□□□□□ -0.46
CPSF6-204ENST00000547486 FAIM2Q9BWQ8 316 aa12.18□□□□□ -0.46
CPSF6-204ENST00000547486 UGT2B28Q9BY64 529 aa12.18□□□□□ -0.46
CPSF6-204ENST00000547486 PRDM14Q9GZV8 571 aa12.18□□□□□ -0.46
CPSF6-204ENST00000547486 METTL7AQ9H8H3 244 aa12.18□□□□□ -0.46
CPSF6-204ENST00000547486 EMCNQ9ULC0 261 aa12.18□□□□□ -0.46
CPSF6-204ENST00000547486 CFL2Q9Y281 166 aa12.18□□□□□ -0.46
CPSF6-204ENST00000547486 GPR55Q9Y2T6 319 aaPredicted RBP12.18□□□□□ -0.46
CPSF6-204ENST00000547486 G3V2L1 256 aa12.17□□□□□ -0.46
CPSF6-204ENST00000547486 SYT5O00445 386 aa12.17□□□□□ -0.46
CPSF6-204ENST00000547486 TO15178 435 aa12.17□□□□□ -0.46
CPSF6-204ENST00000547486 ACOX3O15254 700 aa12.17□□□□□ -0.46
CPSF6-204ENST00000547486 PCDH7O60245 1069 aa12.17□□□□□ -0.46
CPSF6-204ENST00000547486 ESRRBO95718 433 aa12.17□□□□□ -0.46
CPSF6-204ENST00000547486 RHOXF2BP0C7M4 288 aa12.17□□□□□ -0.46
CPSF6-204ENST00000547486 CT45A8P0DMV1 189 aa12.17□□□□□ -0.46
CPSF6-204ENST00000547486 CT45A9P0DMV2 189 aa12.17□□□□□ -0.46
CPSF6-204ENST00000547486 DRD2P14416 443 aa12.17□□□□□ -0.46
CPSF6-204ENST00000547486 BMP5P22003 454 aa12.17□□□□□ -0.46
CPSF6-204ENST00000547486 TIMP3P35625 211 aa12.17□□□□□ -0.46
CPSF6-204ENST00000547486 FOXA1P55317 472 aa12.17□□□□□ -0.46
CPSF6-204ENST00000547486 CORO7P57737 925 aa12.17□□□□□ -0.46
CPSF6-204ENST00000547486 RPP38P78345 283 aaKnown RBP12.17□□□□□ -0.46
CPSF6-204ENST00000547486 BTKQ06187 659 aa12.17□□□□□ -0.46
CPSF6-204ENST00000547486 PLCXD2Q0VAA5 305 aa12.17□□□□□ -0.46
CPSF6-204ENST00000547486 LCP2Q13094 533 aa12.17□□□□□ -0.46
CPSF6-204ENST00000547486 CT45A2Q5DJT8 189 aa12.17□□□□□ -0.46
CPSF6-204ENST00000547486 TMEM81Q6P7N7 255 aa12.17□□□□□ -0.46
CPSF6-204ENST00000547486 SH2D5Q6ZV89 423 aa12.17□□□□□ -0.46
CPSF6-204ENST00000547486 TMEM200AQ86VY9 491 aa12.17□□□□□ -0.46
CPSF6-204ENST00000547486 SLC22A9Q8IVM8 553 aa12.17□□□□□ -0.46
CPSF6-204ENST00000547486 ZZZ3Q8IYH5 903 aa12.17□□□□□ -0.46
CPSF6-204ENST00000547486 GBP7Q8N8V2 638 aaPredicted RBP12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms