RNA–Protein interactions for RNA: ENST00000546869.1

DDX54-203, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-203ENST00000546869 CYP4Z2PQ8N1L4 340 aa13.37□□□□□ -0.27
DDX54-203ENST00000546869 SIMC1Q8NDZ2 872 aa13.37□□□□□ -0.27
DDX54-203ENST00000546869 VPS37AQ8NEZ2 397 aa13.37□□□□□ -0.27
DDX54-203ENST00000546869 DNAJB8Q8NHS0 232 aa13.37□□□□□ -0.27
DDX54-203ENST00000546869 HOXB13Q92826 284 aaPredicted RBP13.37□□□□□ -0.27
DDX54-203ENST00000546869 TMEM125Q96AQ2 219 aa13.37□□□□□ -0.27
DDX54-203ENST00000546869 SPACA9Q96E40 222 aaPredicted RBP13.37□□□□□ -0.27
DDX54-203ENST00000546869 LCORQ96JN0 433 aaPredicted RBP13.37□□□□□ -0.27
DDX54-203ENST00000546869 BTBD9Q96Q07 612 aa13.37□□□□□ -0.27
DDX54-203ENST00000546869 GAL3ST4Q96RP7 486 aa13.37□□□□□ -0.27
DDX54-203ENST00000546869 SH2D2AQ9NP31 389 aa13.37□□□□□ -0.27
DDX54-203ENST00000546869 TIMMDC1Q9NPL8 285 aa13.37□□□□□ -0.27
DDX54-203ENST00000546869 TCF7L2Q9NQB0 619 aa13.37□□□□□ -0.27
DDX54-203ENST00000546869 SDR39U1Q9NRG7 319 aaPredicted RBP13.37□□□□□ -0.27
DDX54-203ENST00000546869 TMEM45AQ9NWC5 275 aa13.37□□□□□ -0.27
DDX54-203ENST00000546869 HPF1Q9NWY4 346 aa13.37□□□□□ -0.27
DDX54-203ENST00000546869 ANKRD10Q9NXR5 420 aa13.37□□□□□ -0.27
DDX54-203ENST00000546869 ZIM2Q9NZV7 527 aa13.37□□□□□ -0.27
DDX54-203ENST00000546869 DTX4Q9Y2E6 619 aa13.37□□□□□ -0.27
DDX54-203ENST00000546869 NPFFR2Q9Y5X5 522 aa13.37□□□□□ -0.27
DDX54-203ENST00000546869 SMG1Q96Q15 3661 aaKnown RBP13.36□□□□□ -0.27
DDX54-203ENST00000546869 PRSS51A0A1B0GVH4 220 aa13.36□□□□□ -0.27
DDX54-203ENST00000546869 ASPDHA6ND91 283 aa13.36□□□□□ -0.27
DDX54-203ENST00000546869 FRG2CA6NGY1 282 aa13.36□□□□□ -0.27
DDX54-203ENST00000546869 RNASET2O00584 256 aaKnown RBP13.36□□□□□ -0.27
DDX54-203ENST00000546869 POLR3GO15318 223 aaPredicted RBP13.36□□□□□ -0.27
DDX54-203ENST00000546869 NME2P1O60361 137 aa13.36□□□□□ -0.27
DDX54-203ENST00000546869 SOX30O94993 753 aa13.36□□□□□ -0.27
DDX54-203ENST00000546869 F10P00742 488 aa13.36□□□□□ -0.27
DDX54-203ENST00000546869 NME2P22392 152 aa13.36□□□□□ -0.27
DDX54-203ENST00000546869 PTGER1P34995 402 aa13.36□□□□□ -0.27
DDX54-203ENST00000546869 GPC1P35052 558 aa13.36□□□□□ -0.27
DDX54-203ENST00000546869 KIR3DL1P43629 444 aa13.36□□□□□ -0.27
DDX54-203ENST00000546869 TMED10P49755 219 aaKnown RBP13.36□□□□□ -0.27
DDX54-203ENST00000546869 NR0B1P51843 470 aaKnown RBP13.36□□□□□ -0.27
DDX54-203ENST00000546869 WNT3P56703 355 aa13.36□□□□□ -0.27
DDX54-203ENST00000546869 GUCY1A3Q02108 690 aa13.36□□□□□ -0.27
DDX54-203ENST00000546869 LRRC74AQ0VAA2 488 aa13.36□□□□□ -0.27
DDX54-203ENST00000546869 RPS6KA2Q15349 733 aa13.36□□□□□ -0.27
DDX54-203ENST00000546869 INPP5JQ15735 1006 aaPredicted RBP13.36□□□□□ -0.27
DDX54-203ENST00000546869 NTRK2Q16620 822 aa13.36□□□□□ -0.27
DDX54-203ENST00000546869 ZCCHC12Q6PEW1 402 aa13.36□□□□□ -0.27
DDX54-203ENST00000546869 IL20RBQ6UXL0 311 aa13.36□□□□□ -0.27
DDX54-203ENST00000546869 TMEM64Q6YI46 380 aa13.36□□□□□ -0.27
DDX54-203ENST00000546869 RTL4Q6ZR62 310 aa13.36□□□□□ -0.27
DDX54-203ENST00000546869 C5orf34Q96MH7 638 aa13.36□□□□□ -0.27
DDX54-203ENST00000546869 SECISBP2Q96T21 854 aaKnown RBP13.36□□□□□ -0.27
DDX54-203ENST00000546869 ITPAQ9BY32 194 aa13.36□□□□□ -0.27
DDX54-203ENST00000546869 NXF5Q9H1B4 397 aaKnown RBP13.36□□□□□ -0.27
DDX54-203ENST00000546869 EPN3Q9H201 632 aa13.36□□□□□ -0.27
DDX54-203ENST00000546869 FOLH1BQ9HBA9 442 aa13.36□□□□□ -0.27
DDX54-203ENST00000546869 C3orf14Q9HBI5 128 aa13.36□□□□□ -0.27
DDX54-203ENST00000546869 NEUROD4Q9HD90 331 aa13.36□□□□□ -0.27
DDX54-203ENST00000546869 DDX18Q9NVP1 670 aaKnown RBP13.36□□□□□ -0.27
DDX54-203ENST00000546869 BSNQ9UPA5 3926 aa13.35□□□□□ -0.27
DDX54-203ENST00000546869 BOD1L1Q8NFC6 3051 aa13.35□□□□□ -0.27
DDX54-203ENST00000546869 ANKRD33BA6NCL7 494 aa13.35□□□□□ -0.27
DDX54-203ENST00000546869 E9PBE3 544 aa13.35□□□□□ -0.27
DDX54-203ENST00000546869 KLRC4-KLRK1H3BQV0 150 aa13.35□□□□□ -0.27
DDX54-203ENST00000546869 EMC8O43402 210 aa13.35□□□□□ -0.27
DDX54-203ENST00000546869 ERN1O75460 977 aaKnown RBP13.35□□□□□ -0.27
DDX54-203ENST00000546869 SLC22A3O75751 556 aa13.35□□□□□ -0.27
DDX54-203ENST00000546869 IL6P05231 212 aa13.35□□□□□ -0.27
DDX54-203ENST00000546869 CT45A8P0DMV1 189 aa13.35□□□□□ -0.27
DDX54-203ENST00000546869 CT45A9P0DMV2 189 aa13.35□□□□□ -0.27
DDX54-203ENST00000546869 MAP3K8P41279 467 aa13.35□□□□□ -0.27
DDX54-203ENST00000546869 UFM1P61960 85 aa13.35□□□□□ -0.27
DDX54-203ENST00000546869 PRR5P85299 388 aa13.35□□□□□ -0.27
DDX54-203ENST00000546869 HSPB3Q12988 150 aa13.35□□□□□ -0.27
DDX54-203ENST00000546869 PGS1Q32NB8 556 aa13.35□□□□□ -0.27
DDX54-203ENST00000546869 CT45A2Q5DJT8 189 aa13.35□□□□□ -0.27
DDX54-203ENST00000546869 EXOSC6Q5RKV6 272 aaKnown RBP13.35□□□□□ -0.27
DDX54-203ENST00000546869 TMEM81Q6P7N7 255 aa13.35□□□□□ -0.27
DDX54-203ENST00000546869 MDGA2Q7Z553 956 aa13.35□□□□□ -0.27
DDX54-203ENST00000546869 PSD4Q8NDX1 1056 aa13.35□□□□□ -0.27
DDX54-203ENST00000546869 PAQR8Q8TEZ7 354 aa13.35□□□□□ -0.27
DDX54-203ENST00000546869 NUDT8Q8WV74 236 aa13.35□□□□□ -0.27
DDX54-203ENST00000546869 MOAP1Q96BY2 351 aa13.35□□□□□ -0.27
DDX54-203ENST00000546869 SNRNP40Q96DI7 357 aaKnown RBP13.35□□□□□ -0.27
DDX54-203ENST00000546869 TEX37Q96LM6 180 aa13.35□□□□□ -0.27
DDX54-203ENST00000546869 EBF4Q9BQW3 602 aa13.35□□□□□ -0.27
DDX54-203ENST00000546869 LMF2Q9BU23 707 aaKnown RBP13.35□□□□□ -0.27
DDX54-203ENST00000546869 ANKRA2Q9H9E1 313 aa13.35□□□□□ -0.27
DDX54-203ENST00000546869 SIRT3Q9NTG7 399 aaPredicted RBP13.35□□□□□ -0.27
DDX54-203ENST00000546869 FAM120CQ9NX05 1096 aaKnown RBP13.35□□□□□ -0.27
DDX54-203ENST00000546869 GIN1Q9NXP7 522 aa13.35□□□□□ -0.27
DDX54-203ENST00000546869 MAP10Q9P2G4 905 aa13.35□□□□□ -0.27
DDX54-203ENST00000546869 ERVK-11Q9UQG0 969 aa13.35□□□□□ -0.27
DDX54-203ENST00000546869 KLF13Q9Y2Y9 288 aaPredicted RBP13.35□□□□□ -0.27
DDX54-203ENST00000546869 COPG1Q9Y678 874 aaKnown RBP13.35□□□□□ -0.27
DDX54-203ENST00000546869 CNTRLQ7Z7A1 2325 aa13.35□□□□□ -0.27
DDX54-203ENST00000546869 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.34□□□□□ -0.27
DDX54-203ENST00000546869 TP53I11O14683 189 aa13.34□□□□□ -0.27
DDX54-203ENST00000546869 RASAL1O95294 804 aa13.34□□□□□ -0.27
DDX54-203ENST00000546869 CRYABP02511 175 aaKnown RBP13.34□□□□□ -0.27
DDX54-203ENST00000546869 ABCD3P28288 659 aa13.34□□□□□ -0.27
DDX54-203ENST00000546869 IL12AP29459 219 aa13.34□□□□□ -0.27
DDX54-203ENST00000546869 CDK9P50750 372 aaKnown RBP13.34□□□□□ -0.27
DDX54-203ENST00000546869 ATP4BP51164 291 aa13.34□□□□□ -0.27
DDX54-203ENST00000546869 PHC1P78364 1004 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms