RNA–Protein interactions for RNA: ENST00000546304.1

PRKDC-211, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-211ENST00000546304 PLPP5Q8NEB5 264 aa5.91□□□□□ -1.46
PRKDC-211ENST00000546304 OR11G2Q8NGC1 345 aa5.91□□□□□ -1.46
PRKDC-211ENST00000546304 CEP70Q8NHQ1 597 aa5.91□□□□□ -1.46
PRKDC-211ENST00000546304 RFWD2Q8NHY2 731 aa5.91□□□□□ -1.46
PRKDC-211ENST00000546304 DNAJB14Q8TBM8 379 aa5.91□□□□□ -1.46
PRKDC-211ENST00000546304 THAP4Q8WY91 577 aa5.91□□□□□ -1.46
PRKDC-211ENST00000546304 GFM2Q969S9 779 aaKnown RBP5.91□□□□□ -1.46
PRKDC-211ENST00000546304 EXOSC8Q96B26 276 aaKnown RBP5.91□□□□□ -1.46
PRKDC-211ENST00000546304 ANKRD9Q96BM1 317 aaPredicted RBP5.91□□□□□ -1.46
PRKDC-211ENST00000546304 PPCDCQ96CD2 204 aa5.91□□□□□ -1.46
PRKDC-211ENST00000546304 CHMP6Q96FZ7 201 aa5.91□□□□□ -1.46
PRKDC-211ENST00000546304 EGLN2Q96KS0 407 aa5.91□□□□□ -1.46
PRKDC-211ENST00000546304 MARK4Q96L34 752 aa5.91□□□□□ -1.46
PRKDC-211ENST00000546304 PELOQ9BRX2 385 aaKnown RBP5.91□□□□□ -1.46
PRKDC-211ENST00000546304 BRINP2Q9C0B6 783 aa5.91□□□□□ -1.46
PRKDC-211ENST00000546304 FAM107BQ9H098 131 aa5.91□□□□□ -1.46
PRKDC-211ENST00000546304 NSRP1Q9H0G5 558 aaKnown RBP5.91□□□□□ -1.46
PRKDC-211ENST00000546304 ADAP2Q9NPF8 381 aa5.91□□□□□ -1.46
PRKDC-211ENST00000546304 NECTIN3Q9NQS3 549 aa5.91□□□□□ -1.46
PRKDC-211ENST00000546304 AP5S1Q9NUS5 200 aa5.91□□□□□ -1.46
PRKDC-211ENST00000546304 GIMAP4Q9NUV9 329 aa5.91□□□□□ -1.46
PRKDC-211ENST00000546304 P4HTMQ9NXG6 502 aa5.91□□□□□ -1.46
PRKDC-211ENST00000546304 HEY2Q9UBP5 337 aa5.91□□□□□ -1.46
PRKDC-211ENST00000546304 BAIAP2L1Q9UHR4 511 aa5.91□□□□□ -1.46
PRKDC-211ENST00000546304 UTS2RQ9UKP6 389 aa5.91□□□□□ -1.46
PRKDC-211ENST00000546304 POLHQ9Y253 713 aa5.91□□□□□ -1.46
PRKDC-211ENST00000546304 GPR55Q9Y2T6 319 aaPredicted RBP5.91□□□□□ -1.46
PRKDC-211ENST00000546304 WBP11Q9Y2W2 641 aaKnown RBP5.91□□□□□ -1.46
PRKDC-211ENST00000546304 SF3B6Q9Y3B4 125 aaKnown RBP5.91□□□□□ -1.46
PRKDC-211ENST00000546304 COL6A6A6NMZ7 2263 aa5.9□□□□□ -1.46
PRKDC-211ENST00000546304 TNRC6AQ8NDV7 1962 aaKnown RBP5.9□□□□□ -1.46
PRKDC-211ENST00000546304 IGHV1-45A0A0A0MS14 117 aa5.9□□□□□ -1.46
PRKDC-211ENST00000546304 NSG1A0A0A6YYJ2 146 aa5.9□□□□□ -1.46
PRKDC-211ENST00000546304 MYOCOSA0A1B0GUC4 107 aa5.9□□□□□ -1.46
PRKDC-211ENST00000546304 A0A1W2PS29 197 aa5.9□□□□□ -1.46
PRKDC-211ENST00000546304 OR14I1A6ND48 311 aa5.9□□□□□ -1.46
PRKDC-211ENST00000546304 ARGFXA6NJG6 315 aa5.9□□□□□ -1.46
PRKDC-211ENST00000546304 WASHC1A8K0Z3 465 aa5.9□□□□□ -1.46
PRKDC-211ENST00000546304 PGRMC2O15173 223 aa5.9□□□□□ -1.46
PRKDC-211ENST00000546304 PDPK1O15530 556 aa5.9□□□□□ -1.46
PRKDC-211ENST00000546304 AKAP10O43572 662 aa5.9□□□□□ -1.46
PRKDC-211ENST00000546304 ERAL1O75616 437 aaKnown RBP5.9□□□□□ -1.46
PRKDC-211ENST00000546304 GPR75O95800 540 aa5.9□□□□□ -1.46
PRKDC-211ENST00000546304 HPP00738 406 aa5.9□□□□□ -1.46
PRKDC-211ENST00000546304 IFNA16P05015 189 aa5.9□□□□□ -1.46
PRKDC-211ENST00000546304 CPMP14384 443 aa5.9□□□□□ -1.46
PRKDC-211ENST00000546304 DDX5P17844 614 aaKnown RBP5.9□□□□□ -1.46
PRKDC-211ENST00000546304 PRPS1L1P21108 318 aa5.9□□□□□ -1.46
PRKDC-211ENST00000546304 PIK3R1P27986 724 aa5.9□□□□□ -1.46
PRKDC-211ENST00000546304 NTSP30990 170 aa5.9□□□□□ -1.46
PRKDC-211ENST00000546304 RPL3P39023 403 aaKnown RBP5.9□□□□□ -1.46
PRKDC-211ENST00000546304 STT3AP46977 705 aa5.9□□□□□ -1.46
PRKDC-211ENST00000546304 CLNS1AP54105 237 aaKnown RBP5.9□□□□□ -1.46
PRKDC-211ENST00000546304 RRADP55042 308 aa5.9□□□□□ -1.46
PRKDC-211ENST00000546304 OR4D2P58180 307 aa5.9□□□□□ -1.46
PRKDC-211ENST00000546304 C21orf58P58505 322 aa5.9□□□□□ -1.46
PRKDC-211ENST00000546304 STX1BP61266 288 aa5.9□□□□□ -1.46
PRKDC-211ENST00000546304 ACTN3Q08043 901 aaPredicted RBP5.9□□□□□ -1.46
PRKDC-211ENST00000546304 C2orf80Q0P641 193 aa5.9□□□□□ -1.46
PRKDC-211ENST00000546304 CHAF1BQ13112 559 aa5.9□□□□□ -1.46
PRKDC-211ENST00000546304 LSM12Q3MHD2 195 aaKnown RBP5.9□□□□□ -1.46
PRKDC-211ENST00000546304 ZNF385BQ569K4 471 aa5.9□□□□□ -1.46
PRKDC-211ENST00000546304 DCAF10Q5QP82 559 aa5.9□□□□□ -1.46
PRKDC-211ENST00000546304 C6orf163Q5TEZ5 329 aa5.9□□□□□ -1.46
PRKDC-211ENST00000546304 ANKRD26P1Q6NSI1 321 aa5.9□□□□□ -1.46
PRKDC-211ENST00000546304 R3HCC1LQ7Z5L2 792 aaKnown RBP5.9□□□□□ -1.46
PRKDC-211ENST00000546304 SPATA19Q7Z5L4 167 aa5.9□□□□□ -1.46
PRKDC-211ENST00000546304 CPEB2Q7Z5Q1 589 aaKnown RBP5.9□□□□□ -1.46
PRKDC-211ENST00000546304 ZNF605Q86T29 641 aa5.9□□□□□ -1.46
PRKDC-211ENST00000546304 OR4N5Q8IXE1 308 aa5.9□□□□□ -1.46
PRKDC-211ENST00000546304 SAMD14Q8IZD0 417 aaPredicted RBP5.9□□□□□ -1.46
PRKDC-211ENST00000546304 ST13P4Q8IZP2 240 aaPredicted RBP5.9□□□□□ -1.46
PRKDC-211ENST00000546304 LRRC25Q8N386 305 aaPredicted RBP5.9□□□□□ -1.46
PRKDC-211ENST00000546304 KRTCAP2Q8N6L1 136 aa5.9□□□□□ -1.46
PRKDC-211ENST00000546304 CLEC1AQ8NC01 280 aa5.9□□□□□ -1.46
PRKDC-211ENST00000546304 OR4K14Q8NGD5 310 aa5.9□□□□□ -1.46
PRKDC-211ENST00000546304 OR14A16Q8NHC5 309 aa5.9□□□□□ -1.46
PRKDC-211ENST00000546304 SNRNP27Q8WVK2 155 aaKnown RBP5.9□□□□□ -1.46
PRKDC-211ENST00000546304 UCN3Q969E3 161 aa5.9□□□□□ -1.46
PRKDC-211ENST00000546304 MTERF3Q96E29 417 aa5.9□□□□□ -1.46
PRKDC-211ENST00000546304 CNRIP1Q96F85 164 aaPredicted RBP5.9□□□□□ -1.46
PRKDC-211ENST00000546304 CATSPER2Q96P56 530 aa5.9□□□□□ -1.46
PRKDC-211ENST00000546304 DGAT2Q96PD7 388 aa5.9□□□□□ -1.46
PRKDC-211ENST00000546304 LPAR4Q99677 370 aa5.9□□□□□ -1.46
PRKDC-211ENST00000546304 WDR77Q9BQA1 342 aaPredicted RBP5.9□□□□□ -1.46
PRKDC-211ENST00000546304 TUBB6Q9BUF5 446 aa5.9□□□□□ -1.46
PRKDC-211ENST00000546304 CCDC28BQ9BUN5 200 aa5.9□□□□□ -1.46
PRKDC-211ENST00000546304 TMEM120AQ9BXJ8 343 aa5.9□□□□□ -1.46
PRKDC-211ENST00000546304 ZNF700Q9H0M5 742 aa5.9□□□□□ -1.46
PRKDC-211ENST00000546304 REEP4Q9H6H4 257 aa5.9□□□□□ -1.46
PRKDC-211ENST00000546304 ZNF160Q9HCG1 818 aa5.9□□□□□ -1.46
PRKDC-211ENST00000546304 SLC35C2Q9NQQ7 365 aa5.9□□□□□ -1.46
PRKDC-211ENST00000546304 PNO1Q9NRX1 252 aaKnown RBP5.9□□□□□ -1.46
PRKDC-211ENST00000546304 KLHL14Q9P2G3 628 aa5.9□□□□□ -1.46
PRKDC-211ENST00000546304 CES1P1Q9UKY3 287 aa5.9□□□□□ -1.46
PRKDC-211ENST00000546304 PSME2Q9UL46 239 aa5.9□□□□□ -1.46
PRKDC-211ENST00000546304 EXO1Q9UQ84 846 aaKnown RBP5.9□□□□□ -1.46
PRKDC-211ENST00000546304 ZNF780BQ9Y6R6 833 aa5.9□□□□□ -1.46
PRKDC-211ENST00000546304 RP1L1Q8IWN7 2480 aaPredicted RBP5.9□□□□□ -1.47
PRKDC-211ENST00000546304 A8MUA0 341 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms