RNA–Protein interactions for RNA: ENST00000546298.5

YBX3-218, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-218ENST00000546298 FRG2CA6NGY1 282 aa8.57□□□□□ -1.04
YBX3-218ENST00000546298 TO15178 435 aa8.57□□□□□ -1.04
YBX3-218ENST00000546298 GLRA3O75311 464 aa8.57□□□□□ -1.04
YBX3-218ENST00000546298 CRCPO75575 148 aa8.57□□□□□ -1.04
YBX3-218ENST00000546298 REM1O75628 298 aa8.57□□□□□ -1.04
YBX3-218ENST00000546298 LRATO95237 230 aa8.57□□□□□ -1.04
YBX3-218ENST00000546298 EPPINO95925 133 aa8.57□□□□□ -1.04
YBX3-218ENST00000546298 CBX7O95931 251 aa8.57□□□□□ -1.04
YBX3-218ENST00000546298 IL3P08700 152 aa8.57□□□□□ -1.04
YBX3-218ENST00000546298 ANXA4P09525 319 aaPredicted RBP8.57□□□□□ -1.04
YBX3-218ENST00000546298 FAM153BP0C7A2 387 aa8.57□□□□□ -1.04
YBX3-218ENST00000546298 MYL2P10916 166 aa8.57□□□□□ -1.04
YBX3-218ENST00000546298 CHN1P15882 459 aa8.57□□□□□ -1.04
YBX3-218ENST00000546298 TIA1P31483 386 aaKnown RBP eCLIP8.57□□□□□ -1.04
YBX3-218ENST00000546298 MPIP34949 423 aa8.57□□□□□ -1.04
YBX3-218ENST00000546298 KRT20P35900 424 aa8.57□□□□□ -1.04
YBX3-218ENST00000546298 MRPS22P82650 360 aaKnown RBP8.57□□□□□ -1.04
YBX3-218ENST00000546298 TFF3Q07654 80 aa8.57□□□□□ -1.04
YBX3-218ENST00000546298 EXOSC7Q15024 291 aaKnown RBP8.57□□□□□ -1.04
YBX3-218ENST00000546298 TOMM20Q15388 145 aa8.57□□□□□ -1.04
YBX3-218ENST00000546298 CCDC153Q494R4 210 aa8.57□□□□□ -1.04
YBX3-218ENST00000546298 FAM153CQ494X1 144 aa8.57□□□□□ -1.04
YBX3-218ENST00000546298 TRMT12Q53H54 448 aaKnown RBP8.57□□□□□ -1.04
YBX3-218ENST00000546298 CFAP157Q5JU67 520 aa8.57□□□□□ -1.04
YBX3-218ENST00000546298 TCHHL1Q5QJ38 904 aaPredicted RBP8.57□□□□□ -1.04
YBX3-218ENST00000546298 BICRALQ6AI39 1079 aa8.57□□□□□ -1.04
YBX3-218ENST00000546298 TIGD3Q6B0B8 471 aa8.57□□□□□ -1.04
YBX3-218ENST00000546298 TMEM81Q6P7N7 255 aa8.57□□□□□ -1.04
YBX3-218ENST00000546298 GALNT18Q6P9A2 607 aa8.57□□□□□ -1.04
YBX3-218ENST00000546298 ZYG11AQ6WRX3 759 aa8.57□□□□□ -1.04
YBX3-218ENST00000546298 DMRTC2Q8IXT2 367 aaPredicted RBP8.57□□□□□ -1.04
YBX3-218ENST00000546298 CCDC116Q8IYX3 515 aa8.57□□□□□ -1.04
YBX3-218ENST00000546298 FAM9CQ8IZT9 166 aa8.57□□□□□ -1.04
YBX3-218ENST00000546298 MMP21Q8N119 569 aa8.57□□□□□ -1.04
YBX3-218ENST00000546298 ADCY4Q8NFM4 1077 aa8.57□□□□□ -1.04
YBX3-218ENST00000546298 OR1J4Q8NGS1 313 aa8.57□□□□□ -1.04
YBX3-218ENST00000546298 CNRIP1Q96F85 164 aaPredicted RBP8.57□□□□□ -1.04
YBX3-218ENST00000546298 ZNF681Q96N22 645 aa8.57□□□□□ -1.04
YBX3-218ENST00000546298 TIMP4Q99727 224 aa8.57□□□□□ -1.04
YBX3-218ENST00000546298 ZNF559Q9BR84 538 aa8.57□□□□□ -1.04
YBX3-218ENST00000546298 TXLNGYQ9BZA5 131 aa8.57□□□□□ -1.04
YBX3-218ENST00000546298 ACPTQ9BZG2 426 aa8.57□□□□□ -1.04
YBX3-218ENST00000546298 STMN4Q9H169 189 aaPredicted RBP8.57□□□□□ -1.04
YBX3-218ENST00000546298 UBQLN3Q9H347 655 aa8.57□□□□□ -1.04
YBX3-218ENST00000546298 MID1IP1Q9NPA3 183 aa8.57□□□□□ -1.04
YBX3-218ENST00000546298 RRAGDQ9NQL2 400 aaPredicted RBP8.57□□□□□ -1.04
YBX3-218ENST00000546298 NPDC1Q9NQX5 325 aaPredicted RBP8.57□□□□□ -1.04
YBX3-218ENST00000546298 SIRT5Q9NXA8 310 aa8.57□□□□□ -1.04
YBX3-218ENST00000546298 SENP1Q9P0U3 644 aa8.57□□□□□ -1.04
YBX3-218ENST00000546298 Q9UFV3 132 aa8.57□□□□□ -1.04
YBX3-218ENST00000546298 GRID1Q9ULK0 1009 aa8.57□□□□□ -1.04
YBX3-218ENST00000546298 PLLPQ9Y342 182 aa8.57□□□□□ -1.04
YBX3-218ENST00000546298 MYO9AB2RTY4 2548 aa8.57□□□□□ -1.04
YBX3-218ENST00000546298 DVL2O14641 736 aa8.56□□□□□ -1.04
YBX3-218ENST00000546298 GNB5O14775 395 aa8.56□□□□□ -1.04
YBX3-218ENST00000546298 SNPHO15079 494 aa8.56□□□□□ -1.04
YBX3-218ENST00000546298 PLOD3O60568 738 aa8.56□□□□□ -1.04
YBX3-218ENST00000546298 CBR3O75828 277 aa8.56□□□□□ -1.04
YBX3-218ENST00000546298 SLITRK5O94991 958 aa8.56□□□□□ -1.04
YBX3-218ENST00000546298 ACTL6AO96019 429 aa8.56□□□□□ -1.04
YBX3-218ENST00000546298 IL2RAP01589 272 aa8.56□□□□□ -1.04
YBX3-218ENST00000546298 PCSK2P16519 638 aa8.56□□□□□ -1.04
YBX3-218ENST00000546298 PTPN6P29350 595 aa8.56□□□□□ -1.04
YBX3-218ENST00000546298 ADH7P40394 386 aa8.56□□□□□ -1.04
YBX3-218ENST00000546298 EMDP50402 254 aa8.56□□□□□ -1.04
YBX3-218ENST00000546298 HTR6P50406 440 aa8.56□□□□□ -1.04
YBX3-218ENST00000546298 MRPS35P82673 323 aaKnown RBP8.56□□□□□ -1.04
YBX3-218ENST00000546298 HMGCS1Q01581 520 aa8.56□□□□□ -1.04
YBX3-218ENST00000546298 BTKQ06187 659 aa8.56□□□□□ -1.04
YBX3-218ENST00000546298 CRYZQ08257 329 aaKnown RBP8.56□□□□□ -1.04
YBX3-218ENST00000546298 MYBPHQ13203 477 aa8.56□□□□□ -1.04
YBX3-218ENST00000546298 EFR3AQ14156 821 aa8.56□□□□□ -1.04
YBX3-218ENST00000546298 LTB4RQ15722 352 aa8.56□□□□□ -1.04
YBX3-218ENST00000546298 NNATQ16517 81 aa8.56□□□□□ -1.04
YBX3-218ENST00000546298 IMPG1Q17R60 797 aa8.56□□□□□ -1.04
YBX3-218ENST00000546298 NHSL2Q5HYW2 709 aa8.56□□□□□ -1.04
YBX3-218ENST00000546298 SPDYAQ5MJ70 313 aa8.56□□□□□ -1.04
YBX3-218ENST00000546298 FNDC7Q5VTL7 733 aa8.56□□□□□ -1.04
YBX3-218ENST00000546298 VASNQ6EMK4 673 aa8.56□□□□□ -1.04
YBX3-218ENST00000546298 ANGPTL8Q6UXH0 198 aa8.56□□□□□ -1.04
YBX3-218ENST00000546298 WDR53Q7Z5U6 358 aaPredicted RBP8.56□□□□□ -1.04
YBX3-218ENST00000546298 LACC1Q8IV20 430 aa8.56□□□□□ -1.04
YBX3-218ENST00000546298 CCDC63Q8NA47 563 aa8.56□□□□□ -1.04
YBX3-218ENST00000546298 FAM76AQ8TAV0 307 aa8.56□□□□□ -1.04
YBX3-218ENST00000546298 RDH11Q8TC12 318 aa8.56□□□□□ -1.04
YBX3-218ENST00000546298 C16orf78Q8WTQ4 265 aa8.56□□□□□ -1.04
YBX3-218ENST00000546298 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.56□□□□□ -1.04
YBX3-218ENST00000546298 HGDQ93099 445 aa8.56□□□□□ -1.04
YBX3-218ENST00000546298 ABTB1Q969K4 478 aaPredicted RBP8.56□□□□□ -1.04
YBX3-218ENST00000546298 EXOSC8Q96B26 276 aaKnown RBP8.56□□□□□ -1.04
YBX3-218ENST00000546298 APIPQ96GX9 242 aa8.56□□□□□ -1.04
YBX3-218ENST00000546298 COL21A1Q96P44 957 aa8.56□□□□□ -1.04
YBX3-218ENST00000546298 GNRHR2Q96P88 292 aa8.56□□□□□ -1.04
YBX3-218ENST00000546298 BBS4Q96RK4 519 aa8.56□□□□□ -1.04
YBX3-218ENST00000546298 OSBPL11Q9BXB4 747 aa8.56□□□□□ -1.04
YBX3-218ENST00000546298 PRDM14Q9GZV8 571 aa8.56□□□□□ -1.04
YBX3-218ENST00000546298 SLC35C2Q9NQQ7 365 aa8.56□□□□□ -1.04
YBX3-218ENST00000546298 TAS2R9Q9NYW1 312 aa8.56□□□□□ -1.04
YBX3-218ENST00000546298 KLRF1Q9NZS2 232 aa8.56□□□□□ -1.04
YBX3-218ENST00000546298 HEY2Q9UBP5 337 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms