RNA–Protein interactions for RNA: ENST00000544964.6

ACTN1-206, Transcript of actinin alpha 1, humanhuman

TSL 5

Gene ACTN1, Length 891 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-206ENST00000544964 SIKE1Q9BRV8 207 aa11.56□□□□□ -0.56
ACTN1-206ENST00000544964 CCDC28BQ9BUN5 200 aa11.56□□□□□ -0.56
ACTN1-206ENST00000544964 REEP4Q9H6H4 257 aa11.56□□□□□ -0.56
ACTN1-206ENST00000544964 TRIM45Q9H8W5 580 aaPredicted RBP11.56□□□□□ -0.56
ACTN1-206ENST00000544964 AIG1Q9NVV5 245 aa11.56□□□□□ -0.56
ACTN1-206ENST00000544964 LRFN1Q9P244 771 aa11.56□□□□□ -0.56
ACTN1-206ENST00000544964 UTS2RQ9UKP6 389 aa11.56□□□□□ -0.56
ACTN1-206ENST00000544964 NPIPA1Q9UND3 350 aa11.56□□□□□ -0.56
ACTN1-206ENST00000544964 WBP11Q9Y2W2 641 aaKnown RBP11.56□□□□□ -0.56
ACTN1-206ENST00000544964 SETD2Q9BYW2 2564 aaPredicted RBP11.56□□□□□ -0.56
ACTN1-206ENST00000544964 SCAMP2O15127 329 aaKnown RBP11.55□□□□□ -0.56
ACTN1-206ENST00000544964 SNRPB2P08579 225 aaKnown RBP11.55□□□□□ -0.56
ACTN1-206ENST00000544964 CPMP14384 443 aa11.55□□□□□ -0.56
ACTN1-206ENST00000544964 CD46P15529 392 aa11.55□□□□□ -0.56
ACTN1-206ENST00000544964 TNNI3P19429 210 aa11.55□□□□□ -0.56
ACTN1-206ENST00000544964 AGAP20933 346 aa11.55□□□□□ -0.56
ACTN1-206ENST00000544964 DRD4P21917 467 aa11.55□□□□□ -0.56
ACTN1-206ENST00000544964 HPCAL1P37235 193 aa11.55□□□□□ -0.56
ACTN1-206ENST00000544964 STT3AP46977 705 aa11.55□□□□□ -0.56
ACTN1-206ENST00000544964 ARFIP2P53365 341 aa11.55□□□□□ -0.56
ACTN1-206ENST00000544964 CLDN8P56748 225 aa11.55□□□□□ -0.56
ACTN1-206ENST00000544964 OC90Q02509 493 aaPredicted RBP11.55□□□□□ -0.56
ACTN1-206ENST00000544964 SERTAD2Q14140 314 aa11.55□□□□□ -0.56
ACTN1-206ENST00000544964 RPS6KA2Q15349 733 aa11.55□□□□□ -0.56
ACTN1-206ENST00000544964 KRTCAP3Q53RY4 240 aa11.55□□□□□ -0.56
ACTN1-206ENST00000544964 ZNF385BQ569K4 471 aa11.55□□□□□ -0.56
ACTN1-206ENST00000544964 XKRXQ6PP77 449 aa11.55□□□□□ -0.56
ACTN1-206ENST00000544964 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.55□□□□□ -0.56
ACTN1-206ENST00000544964 SPPL2CQ8IUH8 684 aa11.55□□□□□ -0.56
ACTN1-206ENST00000544964 ARMC10Q8N2F6 343 aa11.55□□□□□ -0.56
ACTN1-206ENST00000544964 NFAM1Q8NET5 270 aaPredicted RBP11.55□□□□□ -0.56
ACTN1-206ENST00000544964 OR7A2PQ8NGA2 310 aa11.55□□□□□ -0.56
ACTN1-206ENST00000544964 PPCDCQ96CD2 204 aa11.55□□□□□ -0.56
ACTN1-206ENST00000544964 CNRIP1Q96F85 164 aaPredicted RBP11.55□□□□□ -0.56
ACTN1-206ENST00000544964 DGAT2Q96PD7 388 aa11.55□□□□□ -0.56
ACTN1-206ENST00000544964 CDCP1Q9H5V8 836 aa11.55□□□□□ -0.56
ACTN1-206ENST00000544964 CHST11Q9NPF2 352 aa11.55□□□□□ -0.56
ACTN1-206ENST00000544964 KLHL14Q9P2G3 628 aa11.55□□□□□ -0.56
ACTN1-206ENST00000544964 PSME2Q9UL46 239 aa11.55□□□□□ -0.56
ACTN1-206ENST00000544964 MEMO1Q9Y316 297 aa11.55□□□□□ -0.56
ACTN1-206ENST00000544964 GPR45Q9Y5Y3 372 aa11.55□□□□□ -0.56
ACTN1-206ENST00000544964 C9JVG2 144 aa11.54□□□□□ -0.56
ACTN1-206ENST00000544964 ADAM10O14672 748 aa11.54□□□□□ -0.56
ACTN1-206ENST00000544964 ANKRD28O15084 1053 aa11.54□□□□□ -0.56
ACTN1-206ENST00000544964 OR10H2O60403 315 aa11.54□□□□□ -0.56
ACTN1-206ENST00000544964 COX7A2P14406 83 aa11.54□□□□□ -0.56
ACTN1-206ENST00000544964 IDO1P14902 403 aa11.54□□□□□ -0.56
ACTN1-206ENST00000544964 ZNF24P17028 368 aa11.54□□□□□ -0.56
ACTN1-206ENST00000544964 EFNA1P20827 205 aaPredicted RBP11.54□□□□□ -0.56
ACTN1-206ENST00000544964 TRHRP34981 398 aaPredicted RBP11.54□□□□□ -0.56
ACTN1-206ENST00000544964 CASP6P55212 293 aa11.54□□□□□ -0.56
ACTN1-206ENST00000544964 MLF1P58340 268 aa11.54□□□□□ -0.56
ACTN1-206ENST00000544964 UFM1P61960 85 aa11.54□□□□□ -0.56
ACTN1-206ENST00000544964 PDE7AQ13946 482 aa11.54□□□□□ -0.56
ACTN1-206ENST00000544964 MPEG1Q2M385 716 aa11.54□□□□□ -0.56
ACTN1-206ENST00000544964 SLC25A25Q6KCM7 469 aa11.54□□□□□ -0.56
ACTN1-206ENST00000544964 CPLX4Q7Z7G2 160 aa11.54□□□□□ -0.56
ACTN1-206ENST00000544964 RPS19BP1Q86WX3 136 aaKnown RBP11.54□□□□□ -0.56
ACTN1-206ENST00000544964 RIMKLAQ8IXN7 391 aa11.54□□□□□ -0.56
ACTN1-206ENST00000544964 ZNF295-AS1Q8N0V1 137 aa11.54□□□□□ -0.56
ACTN1-206ENST00000544964 CPSF7Q8N684 471 aaKnown RBP11.54□□□□□ -0.56
ACTN1-206ENST00000544964 APCDD1LQ8NCL9 501 aa11.54□□□□□ -0.56
ACTN1-206ENST00000544964 CIDECQ96AQ7 238 aaPredicted RBP11.54□□□□□ -0.56
ACTN1-206ENST00000544964 RBM18Q96H35 190 aaKnown RBP11.54□□□□□ -0.56
ACTN1-206ENST00000544964 TEX37Q96LM6 180 aa11.54□□□□□ -0.56
ACTN1-206ENST00000544964 LURAP1Q96LR2 239 aa11.54□□□□□ -0.56
ACTN1-206ENST00000544964 ZNF681Q96N22 645 aa11.54□□□□□ -0.56
ACTN1-206ENST00000544964 PHF12Q96QT6 1004 aa11.54□□□□□ -0.56
ACTN1-206ENST00000544964 ELAC2Q9BQ52 826 aaKnown RBP11.54□□□□□ -0.56
ACTN1-206ENST00000544964 DPY30Q9C005 99 aa11.54□□□□□ -0.56
ACTN1-206ENST00000544964 SLC35C2Q9NQQ7 365 aa11.54□□□□□ -0.56
ACTN1-206ENST00000544964 GIMAP4Q9NUV9 329 aa11.54□□□□□ -0.56
ACTN1-206ENST00000544964 EHD3Q9NZN3 535 aa11.54□□□□□ -0.56
ACTN1-206ENST00000544964 SH3BP4Q9P0V3 963 aa11.54□□□□□ -0.56
ACTN1-206ENST00000544964 ATP6V1HQ9UI12 483 aa11.54□□□□□ -0.56
ACTN1-206ENST00000544964 ZNF223Q9UK11 482 aaPredicted RBP11.54□□□□□ -0.56
ACTN1-206ENST00000544964 ADAM21Q9UKJ8 722 aa11.54□□□□□ -0.56
ACTN1-206ENST00000544964 ZNF780BQ9Y6R6 833 aa11.54□□□□□ -0.56
ACTN1-206ENST00000544964 MYO1GB0I1T2 1018 aa11.53□□□□□ -0.56
ACTN1-206ENST00000544964 C17orf105B2RV13 164 aa11.53□□□□□ -0.56
ACTN1-206ENST00000544964 CDK2AP1O14519 115 aa11.53□□□□□ -0.56
ACTN1-206ENST00000544964 ASNA1O43681 348 aa11.53□□□□□ -0.56
ACTN1-206ENST00000544964 SLC35E2P0CK97 266 aa11.53□□□□□ -0.56
ACTN1-206ENST00000544964 LAMP1P11279 417 aa11.53□□□□□ -0.56
ACTN1-206ENST00000544964 COX6B1P14854 86 aa11.53□□□□□ -0.56
ACTN1-206ENST00000544964 PORP16435 677 aaPredicted RBP11.53□□□□□ -0.56
ACTN1-206ENST00000544964 CSNK2A2P19784 350 aaPredicted RBP11.53□□□□□ -0.56
ACTN1-206ENST00000544964 NCF2P19878 526 aaPredicted RBP11.53□□□□□ -0.56
ACTN1-206ENST00000544964 PRPS1L1P21108 318 aa11.53□□□□□ -0.56
ACTN1-206ENST00000544964 NT5EP21589 574 aa11.53□□□□□ -0.56
ACTN1-206ENST00000544964 IL12AP29459 219 aa11.53□□□□□ -0.56
ACTN1-206ENST00000544964 KIR3DL1P43629 444 aa11.53□□□□□ -0.56
ACTN1-206ENST00000544964 PLIN5Q00G26 463 aa11.53□□□□□ -0.56
ACTN1-206ENST00000544964 ELAVL1Q15717 326 aaKnown RBP11.53□□□□□ -0.56
ACTN1-206ENST00000544964 MAPKAPK3Q16644 382 aa11.53□□□□□ -0.56
ACTN1-206ENST00000544964 GSTA3Q16772 222 aa11.53□□□□□ -0.56
ACTN1-206ENST00000544964 PGS1Q32NB8 556 aa11.53□□□□□ -0.56
ACTN1-206ENST00000544964 PDCD4Q53EL6 469 aaKnown RBP11.53□□□□□ -0.56
ACTN1-206ENST00000544964 SPATA21Q7Z572 469 aa11.53□□□□□ -0.56
ACTN1-206ENST00000544964 R3HCC1LQ7Z5L2 792 aaKnown RBP11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms