RNA–Protein interactions for RNA: ENST00000543727.5

TSFM-208, Transcript of Ts translation elongation factor, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene TSFM, Length 651 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSFM-208ENST00000543727 CKAP2Q8WWK9 683 aa16.51■□□□□ 0.23
TSFM-208ENST00000543727 NR4A3Q92570 626 aa16.51■□□□□ 0.23
TSFM-208ENST00000543727 KAT2AQ92830 837 aa16.51■□□□□ 0.23
TSFM-208ENST00000543727 TESCQ96BS2 214 aa16.51■□□□□ 0.23
TSFM-208ENST00000543727 COQ8BQ96D53 544 aa16.51■□□□□ 0.23
TSFM-208ENST00000543727 PPP1R36Q96LQ0 422 aa16.51■□□□□ 0.23
TSFM-208ENST00000543727 VSTM2LQ96N03 204 aa16.51■□□□□ 0.23
TSFM-208ENST00000543727 SLX1AQ9BQ83 275 aa16.51■□□□□ 0.23
TSFM-208ENST00000543727 SH2D2AQ9NP31 389 aa16.51■□□□□ 0.23
TSFM-208ENST00000543727 KLHL1Q9NR64 748 aa16.51■□□□□ 0.23
TSFM-208ENST00000543727 SACM1LQ9NTJ5 587 aa16.51■□□□□ 0.23
TSFM-208ENST00000543727 OLAHQ9NV23 265 aa16.51■□□□□ 0.23
TSFM-208ENST00000543727 DDX18Q9NVP1 670 aaKnown RBP16.51■□□□□ 0.23
TSFM-208ENST00000543727 CNIH4Q9P003 139 aa16.51■□□□□ 0.23
TSFM-208ENST00000543727 NTMQ9P121 344 aa16.51■□□□□ 0.23
TSFM-208ENST00000543727 MAP10Q9P2G4 905 aa16.51■□□□□ 0.23
TSFM-208ENST00000543727 VPS4AQ9UN37 437 aa16.51■□□□□ 0.23
TSFM-208ENST00000543727 PRRC2CQ9Y520 2896 aaKnown RBP16.5■□□□□ 0.23
TSFM-208ENST00000543727 TP53I11O14683 189 aa16.5■□□□□ 0.23
TSFM-208ENST00000543727 ABCB7O75027 752 aa16.5■□□□□ 0.23
TSFM-208ENST00000543727 KITP10721 976 aa16.5■□□□□ 0.23
TSFM-208ENST00000543727 EDN3P14138 238 aa16.5■□□□□ 0.23
TSFM-208ENST00000543727 GPC1P35052 558 aa16.5■□□□□ 0.23
TSFM-208ENST00000543727 MC3RP41968 323 aa16.5■□□□□ 0.23
TSFM-208ENST00000543727 HSPB3Q12988 150 aa16.5■□□□□ 0.23
TSFM-208ENST00000543727 RPS6KA2Q15349 733 aa16.5■□□□□ 0.23
TSFM-208ENST00000543727 LSM12Q3MHD2 195 aaKnown RBP16.5■□□□□ 0.23
TSFM-208ENST00000543727 TBCELQ5QJ74 424 aa16.5■□□□□ 0.23
TSFM-208ENST00000543727 SLC22A10Q63ZE4 541 aa16.5■□□□□ 0.23
TSFM-208ENST00000543727 TMEM107Q6UX40 140 aa16.5■□□□□ 0.23
TSFM-208ENST00000543727 BNC2Q6ZN30 1099 aaPredicted RBP16.5■□□□□ 0.23
TSFM-208ENST00000543727 GK5Q6ZS86 529 aa16.5■□□□□ 0.23
TSFM-208ENST00000543727 ST6GALNAC3Q8NDV1 305 aa16.5■□□□□ 0.23
TSFM-208ENST00000543727 OR8J2Q8NGG1 315 aa16.5■□□□□ 0.23
TSFM-208ENST00000543727 CEP70Q8NHQ1 597 aa16.5■□□□□ 0.23
TSFM-208ENST00000543727 PSMA8Q8TAA3 256 aa16.5■□□□□ 0.23
TSFM-208ENST00000543727 DOK4Q8TEW6 326 aa16.5■□□□□ 0.23
TSFM-208ENST00000543727 PAQR8Q8TEZ7 354 aa16.5■□□□□ 0.23
TSFM-208ENST00000543727 STON2Q8WXE9 905 aa16.5■□□□□ 0.23
TSFM-208ENST00000543727 FRMD6Q96NE9 622 aa16.5■□□□□ 0.23
TSFM-208ENST00000543727 TAAR6Q96RI8 345 aa16.5■□□□□ 0.23
TSFM-208ENST00000543727 ITPAQ9BY32 194 aa16.5■□□□□ 0.23
TSFM-208ENST00000543727 DPY30Q9C005 99 aa16.5■□□□□ 0.23
TSFM-208ENST00000543727 TRIM4Q9C037 500 aa16.5■□□□□ 0.23
TSFM-208ENST00000543727 C3orf14Q9HBI5 128 aa16.5■□□□□ 0.23
TSFM-208ENST00000543727 NTNG1Q9Y2I2 539 aa16.5■□□□□ 0.23
TSFM-208ENST00000543727 GPR55Q9Y2T6 319 aaPredicted RBP16.5■□□□□ 0.23
TSFM-208ENST00000543727 NPFFR2Q9Y5X5 522 aa16.5■□□□□ 0.23
TSFM-208ENST00000543727 USH1CQ9Y6N9 552 aa16.5■□□□□ 0.23
TSFM-208ENST00000543727 ZNF354AO60765 605 aaPredicted RBP16.49■□□□□ 0.23
TSFM-208ENST00000543727 ERN1O75460 977 aaKnown RBP16.49■□□□□ 0.23
TSFM-208ENST00000543727 WISP1O95388 367 aa16.49■□□□□ 0.23
TSFM-208ENST00000543727 P04436 131 aa16.49■□□□□ 0.23
TSFM-208ENST00000543727 IDO1P14902 403 aa16.49■□□□□ 0.23
TSFM-208ENST00000543727 ABCD3P28288 659 aa16.49■□□□□ 0.23
TSFM-208ENST00000543727 EPHA3P29320 983 aa16.49■□□□□ 0.23
TSFM-208ENST00000543727 DIO3P55073 304 aa16.49■□□□□ 0.23
TSFM-208ENST00000543727 IRX1P78414 480 aaPredicted RBP16.49■□□□□ 0.23
TSFM-208ENST00000543727 SRSF11Q05519 484 aaKnown RBP16.49■□□□□ 0.23
TSFM-208ENST00000543727 ZNHIT3Q15649 155 aaPredicted RBP16.49■□□□□ 0.23
TSFM-208ENST00000543727 GSTA3Q16772 222 aa16.49■□□□□ 0.23
TSFM-208ENST00000543727 ANKRD26P1Q6NSI1 321 aa16.49■□□□□ 0.23
TSFM-208ENST00000543727 TMEM81Q6P7N7 255 aa16.49■□□□□ 0.23
TSFM-208ENST00000543727 ZCCHC12Q6PEW1 402 aa16.49■□□□□ 0.23
TSFM-208ENST00000543727 MDGA2Q7Z553 956 aa16.49■□□□□ 0.23
TSFM-208ENST00000543727 FBXW8Q8N3Y1 598 aa16.49■□□□□ 0.23
TSFM-208ENST00000543727 ZFP62Q8NB50 900 aaPredicted RBP16.49■□□□□ 0.23
TSFM-208ENST00000543727 OR7A2PQ8NGA2 310 aa16.49■□□□□ 0.23
TSFM-208ENST00000543727 OR5P2Q8WZ92 322 aa16.49■□□□□ 0.23
TSFM-208ENST00000543727 CIDECQ96AQ7 238 aaPredicted RBP16.49■□□□□ 0.23
TSFM-208ENST00000543727 MOAP1Q96BY2 351 aa16.49■□□□□ 0.23
TSFM-208ENST00000543727 SIKE1Q9BRV8 207 aa16.49■□□□□ 0.23
TSFM-208ENST00000543727 HES7Q9BYE0 225 aa16.49■□□□□ 0.23
TSFM-208ENST00000543727 NXF5Q9H1B4 397 aaKnown RBP16.49■□□□□ 0.23
TSFM-208ENST00000543727 FOLH1BQ9HBA9 442 aa16.49■□□□□ 0.23
TSFM-208ENST00000543727 AIG1Q9NVV5 245 aa16.49■□□□□ 0.23
TSFM-208ENST00000543727 DTX4Q9Y2E6 619 aa16.49■□□□□ 0.23
TSFM-208ENST00000543727 A0A1W2PRB8 838 aa16.48■□□□□ 0.23
TSFM-208ENST00000543727 ANKRD33BA6NCL7 494 aa16.48■□□□□ 0.23
TSFM-208ENST00000543727 UPK1AO00322 258 aa16.48■□□□□ 0.23
TSFM-208ENST00000543727 RNASET2O00584 256 aaKnown RBP16.48■□□□□ 0.23
TSFM-208ENST00000543727 ZNF195O14628 629 aa16.48■□□□□ 0.23
TSFM-208ENST00000543727 PEX1O43933 1283 aa16.48■□□□□ 0.23
TSFM-208ENST00000543727 PPM1BO75688 479 aa16.48■□□□□ 0.23
TSFM-208ENST00000543727 SOX30O94993 753 aa16.48■□□□□ 0.23
TSFM-208ENST00000543727 LAMP1P11279 417 aa16.48■□□□□ 0.23
TSFM-208ENST00000543727 CNR1P21554 472 aa16.48■□□□□ 0.23
TSFM-208ENST00000543727 PTGER1P34995 402 aa16.48■□□□□ 0.23
TSFM-208ENST00000543727 MRPS22P82650 360 aaKnown RBP16.48■□□□□ 0.23
TSFM-208ENST00000543727 PRR5P85299 388 aa16.48■□□□□ 0.23
TSFM-208ENST00000543727 LRRC74AQ0VAA2 488 aa16.48■□□□□ 0.23
TSFM-208ENST00000543727 VPS26BQ4G0F5 336 aa16.48■□□□□ 0.23
TSFM-208ENST00000543727 TMEM64Q6YI46 380 aa16.48■□□□□ 0.23
TSFM-208ENST00000543727 ACAD11Q709F0 780 aa16.48■□□□□ 0.23
TSFM-208ENST00000543727 ZNF551Q7Z340 670 aaPredicted RBP16.48■□□□□ 0.23
TSFM-208ENST00000543727 SULF2Q8IWU5 870 aa16.48■□□□□ 0.23
TSFM-208ENST00000543727 SLC34A3Q8N130 599 aa16.48■□□□□ 0.23
TSFM-208ENST00000543727 GLB1L3Q8NCI6 653 aaPredicted RBP16.48■□□□□ 0.23
TSFM-208ENST00000543727 VPS37AQ8NEZ2 397 aa16.48■□□□□ 0.23
TSFM-208ENST00000543727 MS4A4EQ96PG1 132 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms