RNA–Protein interactions for RNA: ENST00000543552.5

RTN3-213, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 529 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-213ENST00000543552 MCM8Q9UJA3 840 aa12.01□□□□□ -0.49
RTN3-213ENST00000543552 CAMK2AQ9UQM7 478 aa12.01□□□□□ -0.49
RTN3-213ENST00000543552 L3MBTL1Q9Y468 752 aa12.01□□□□□ -0.49
RTN3-213ENST00000543552 GNG14A0A1W2PPG7 69 aa12□□□□□ -0.49
RTN3-213ENST00000543552 MANBAO00462 879 aa12□□□□□ -0.49
RTN3-213ENST00000543552 ABCB7O75027 752 aa12□□□□□ -0.49
RTN3-213ENST00000543552 ULK1O75385 1050 aa12□□□□□ -0.49
RTN3-213ENST00000543552 OR4F21O95013 312 aa12□□□□□ -0.49
RTN3-213ENST00000543552 ACTL6AO96019 429 aa12□□□□□ -0.49
RTN3-213ENST00000543552 ENO1P06733 434 aaKnown RBP12□□□□□ -0.49
RTN3-213ENST00000543552 ABCB1P08183 1280 aaPredicted RBP12□□□□□ -0.49
RTN3-213ENST00000543552 DRD2P14416 443 aa12□□□□□ -0.49
RTN3-213ENST00000543552 TSPAN8P19075 237 aa12□□□□□ -0.49
RTN3-213ENST00000543552 S1PR1P21453 382 aa12□□□□□ -0.49
RTN3-213ENST00000543552 BMP5P22003 454 aa12□□□□□ -0.49
RTN3-213ENST00000543552 ATP5F1P24539 256 aaPredicted RBP12□□□□□ -0.49
RTN3-213ENST00000543552 UQCRC1P31930 480 aa12□□□□□ -0.49
RTN3-213ENST00000543552 KIR2DL3P43628 341 aa12□□□□□ -0.49
RTN3-213ENST00000543552 PPICP45877 212 aa12□□□□□ -0.49
RTN3-213ENST00000543552 GSTM5P46439 218 aa12□□□□□ -0.49
RTN3-213ENST00000543552 PKNOX1P55347 436 aa12□□□□□ -0.49
RTN3-213ENST00000543552 ACSM2AQ08AH3 577 aa12□□□□□ -0.49
RTN3-213ENST00000543552 LCP2Q13094 533 aa12□□□□□ -0.49
RTN3-213ENST00000543552 RCAN2Q14206 197 aa12□□□□□ -0.49
RTN3-213ENST00000543552 HEPACAMQ14CZ8 416 aa12□□□□□ -0.49
RTN3-213ENST00000543552 NNATQ16517 81 aa12□□□□□ -0.49
RTN3-213ENST00000543552 ERCC6LQ2NKX8 1250 aa12□□□□□ -0.49
RTN3-213ENST00000543552 ZNF678Q5SXM1 525 aa12□□□□□ -0.49
RTN3-213ENST00000543552 ACSM2BQ68CK6 577 aa12□□□□□ -0.49
RTN3-213ENST00000543552 BICRALQ6AI39 1079 aa12□□□□□ -0.49
RTN3-213ENST00000543552 VASNQ6EMK4 673 aa12□□□□□ -0.49
RTN3-213ENST00000543552 SCIMPQ6UWF3 145 aa12□□□□□ -0.49
RTN3-213ENST00000543552 ANGPTL8Q6UXH0 198 aa12□□□□□ -0.49
RTN3-213ENST00000543552 RPS27LQ71UM5 84 aaKnown RBP12□□□□□ -0.49
RTN3-213ENST00000543552 CDYL2Q8N8U2 506 aa12□□□□□ -0.49
RTN3-213ENST00000543552 METTL6Q8TCB7 284 aa12□□□□□ -0.49
RTN3-213ENST00000543552 ACMSDQ8TDX5 336 aa12□□□□□ -0.49
RTN3-213ENST00000543552 TM4SF18Q96CE8 201 aa12□□□□□ -0.49
RTN3-213ENST00000543552 TMCO6Q96DC7 493 aa12□□□□□ -0.49
RTN3-213ENST00000543552 OMA1Q96E52 524 aa12□□□□□ -0.49
RTN3-213ENST00000543552 FETUBQ9UGM5 382 aa12□□□□□ -0.49
RTN3-213ENST00000543552 ZNF639Q9UID6 485 aa12□□□□□ -0.49
RTN3-213ENST00000543552 UTS2RQ9UKP6 389 aa12□□□□□ -0.49
RTN3-213ENST00000543552 NINQ8N4C6 2090 aa11.99□□□□□ -0.49
RTN3-213ENST00000543552 SPG11Q96JI7 2443 aa11.99□□□□□ -0.49
RTN3-213ENST00000543552 PRAMEF25A6NGN4 478 aa11.99□□□□□ -0.49
RTN3-213ENST00000543552 FRG2CA6NGY1 282 aa11.99□□□□□ -0.49
RTN3-213ENST00000543552 CD8B2A6NJW9 211 aa11.99□□□□□ -0.49
RTN3-213ENST00000543552 SYT5O00445 386 aa11.99□□□□□ -0.49
RTN3-213ENST00000543552 PCDH7O60245 1069 aa11.99□□□□□ -0.49
RTN3-213ENST00000543552 GSTA1P08263 222 aa11.99□□□□□ -0.49
RTN3-213ENST00000543552 IMPDH1P20839 514 aa11.99□□□□□ -0.49
RTN3-213ENST00000543552 DRD5P21918 477 aa11.99□□□□□ -0.49
RTN3-213ENST00000543552 KRT20P35900 424 aa11.99□□□□□ -0.49
RTN3-213ENST00000543552 NAA20P61599 178 aa11.99□□□□□ -0.49
RTN3-213ENST00000543552 MRPS22P82650 360 aaKnown RBP11.99□□□□□ -0.49
RTN3-213ENST00000543552 MGAT2Q10469 447 aa11.99□□□□□ -0.49
RTN3-213ENST00000543552 EXOSC7Q15024 291 aaKnown RBP11.99□□□□□ -0.49
RTN3-213ENST00000543552 TESK1Q15569 626 aa11.99□□□□□ -0.49
RTN3-213ENST00000543552 FBXL19-AS1Q494R0 122 aa11.99□□□□□ -0.49
RTN3-213ENST00000543552 FNDC7Q5VTL7 733 aa11.99□□□□□ -0.49
RTN3-213ENST00000543552 NSUN5P2Q63ZY6 315 aa11.99□□□□□ -0.49
RTN3-213ENST00000543552 ENPP6Q6UWR7 440 aa11.99□□□□□ -0.49
RTN3-213ENST00000543552 LIX1LQ8IVB5 337 aa11.99□□□□□ -0.49
RTN3-213ENST00000543552 TMEM151AQ8N4L1 468 aa11.99□□□□□ -0.49
RTN3-213ENST00000543552 CEP112Q8N8E3 955 aa11.99□□□□□ -0.49
RTN3-213ENST00000543552 ADCY4Q8NFM4 1077 aa11.99□□□□□ -0.49
RTN3-213ENST00000543552 OR52R1Q8NGF1 315 aa11.99□□□□□ -0.49
RTN3-213ENST00000543552 ZNF675Q8TD23 568 aa11.99□□□□□ -0.49
RTN3-213ENST00000543552 RNASE6Q93091 150 aaKnown RBP11.99□□□□□ -0.49
RTN3-213ENST00000543552 ABTB1Q969K4 478 aaPredicted RBP11.99□□□□□ -0.49
RTN3-213ENST00000543552 CTHRC1Q96CG8 243 aa11.99□□□□□ -0.49
RTN3-213ENST00000543552 CCDC126Q96EE4 140 aa11.99□□□□□ -0.49
RTN3-213ENST00000543552 CNRIP1Q96F85 164 aaPredicted RBP11.99□□□□□ -0.49
RTN3-213ENST00000543552 TMEM237Q96Q45 408 aa11.99□□□□□ -0.49
RTN3-213ENST00000543552 HBEGFQ99075 208 aa11.99□□□□□ -0.49
RTN3-213ENST00000543552 SENP1Q9P0U3 644 aa11.99□□□□□ -0.49
RTN3-213ENST00000543552 PSMC3IPQ9P2W1 217 aaPredicted RBP11.99□□□□□ -0.49
RTN3-213ENST00000543552 DTX4Q9Y2E6 619 aa11.99□□□□□ -0.49
RTN3-213ENST00000543552 PLLPQ9Y342 182 aa11.99□□□□□ -0.49
RTN3-213ENST00000543552 ARHGAP21Q5T5U3 1957 aa11.99□□□□□ -0.49
RTN3-213ENST00000543552 EXPH5Q8NEV8 1989 aa11.99□□□□□ -0.49
RTN3-213ENST00000543552 NCKAP5O14513 1909 aa11.98□□□□□ -0.49
RTN3-213ENST00000543552 A0A1B0GTL3 188 aa11.98□□□□□ -0.49
RTN3-213ENST00000543552 OR6C70A6NIJ9 312 aa11.98□□□□□ -0.49
RTN3-213ENST00000543552 H3BQF6 201 aa11.98□□□□□ -0.49
RTN3-213ENST00000543552 PPP6CO00743 305 aa11.98□□□□□ -0.49
RTN3-213ENST00000543552 GNB5O14775 395 aa11.98□□□□□ -0.49
RTN3-213ENST00000543552 SNPHO15079 494 aa11.98□□□□□ -0.49
RTN3-213ENST00000543552 TO15178 435 aa11.98□□□□□ -0.49
RTN3-213ENST00000543552 CBR3O75828 277 aa11.98□□□□□ -0.49
RTN3-213ENST00000543552 CBX7O95931 251 aa11.98□□□□□ -0.49
RTN3-213ENST00000543552 SBK3P0C264 359 aa11.98□□□□□ -0.49
RTN3-213ENST00000543552 CYP4B1P13584 511 aa11.98□□□□□ -0.49
RTN3-213ENST00000543552 PTPN6P29350 595 aa11.98□□□□□ -0.49
RTN3-213ENST00000543552 CEACAM8P31997 349 aaPredicted RBP11.98□□□□□ -0.49
RTN3-213ENST00000543552 PRKAA2P54646 552 aa11.98□□□□□ -0.49
RTN3-213ENST00000543552 DLX5P56178 289 aa11.98□□□□□ -0.49
RTN3-213ENST00000543552 EFR3AQ14156 821 aa11.98□□□□□ -0.49
RTN3-213ENST00000543552 FAM111BQ6SJ93 734 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms