RNA–Protein interactions for RNA: ENST00000542541.6

HOMER3-205, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-205ENST00000542541 IRAK1BP1Q5VVH5 260 aa21.46■■□□□ 1.03
HOMER3-205ENST00000542541 SAXO2Q658L1 398 aa21.46■■□□□ 1.03
HOMER3-205ENST00000542541 INO80CQ6PI98 192 aaPredicted RBP21.46■■□□□ 1.03
HOMER3-205ENST00000542541 C6orf89Q6UWU4 347 aa21.46■■□□□ 1.03
HOMER3-205ENST00000542541 HACD2Q6Y1H2 254 aa21.46■■□□□ 1.03
HOMER3-205ENST00000542541 SIMC1Q8NDZ2 872 aa21.46■■□□□ 1.03
HOMER3-205ENST00000542541 ZFP90Q8TF47 636 aa21.46■■□□□ 1.03
HOMER3-205ENST00000542541 SLC25A37Q9NYZ2 338 aa21.46■■□□□ 1.03
HOMER3-205ENST00000542541 VAPAQ9P0L0 249 aa21.46■■□□□ 1.03
HOMER3-205ENST00000542541 EVPLLA8MZ36 301 aa21.45■■□□□ 1.02
HOMER3-205ENST00000542541 CLIC1O00299 241 aa21.45■■□□□ 1.02
HOMER3-205ENST00000542541 UBOX5O94941 541 aa21.45■■□□□ 1.02
HOMER3-205ENST00000542541 HMGN2P05204 90 aaKnown RBP21.45■■□□□ 1.02
HOMER3-205ENST00000542541 ITPKBP27987 946 aa21.45■■□□□ 1.02
HOMER3-205ENST00000542541 MAGEA8P43361 318 aa21.45■■□□□ 1.02
HOMER3-205ENST00000542541 CPA2P48052 419 aa21.45■■□□□ 1.02
HOMER3-205ENST00000542541 DCAF7P61962 342 aa21.45■■□□□ 1.02
HOMER3-205ENST00000542541 DUSP8Q13202 625 aa21.45■■□□□ 1.02
HOMER3-205ENST00000542541 DEFB109BQ30KR1 87 aa21.45■■□□□ 1.02
HOMER3-205ENST00000542541 GTDC1Q4AE62 458 aa21.45■■□□□ 1.02
HOMER3-205ENST00000542541 ANGPTL8Q6UXH0 198 aa21.45■■□□□ 1.02
HOMER3-205ENST00000542541 CLEC4FQ8N1N0 589 aa21.45■■□□□ 1.02
HOMER3-205ENST00000542541 CDRT4Q8N9R6 151 aa21.45■■□□□ 1.02
HOMER3-205ENST00000542541 NUBPLQ8TB37 319 aa21.45■■□□□ 1.02
HOMER3-205ENST00000542541 SH3GL1Q99961 368 aa21.45■■□□□ 1.02
HOMER3-205ENST00000542541 ING2Q9H160 280 aa21.45■■□□□ 1.02
HOMER3-205ENST00000542541 RAD21L1Q9H4I0 556 aa21.45■■□□□ 1.02
HOMER3-205ENST00000542541 EQTNQ9NQ60 294 aa21.45■■□□□ 1.02
HOMER3-205ENST00000542541 NDE1Q9NXR1 346 aa21.45■■□□□ 1.02
HOMER3-205ENST00000542541 ZNF223Q9UK11 482 aaPredicted RBP21.45■■□□□ 1.02
HOMER3-205ENST00000542541 CORO2BQ9UQ03 480 aa21.45■■□□□ 1.02
HOMER3-205ENST00000542541 GMEB1Q9Y692 573 aa21.45■■□□□ 1.02
HOMER3-205ENST00000542541 GIMAP1-GIMAP5A0A087WTJ2 511 aa21.44■■□□□ 1.02
HOMER3-205ENST00000542541 TRBV5-3A0A0A0MS03 114 aa21.44■■□□□ 1.02
HOMER3-205ENST00000542541 C2orf92A0A1B0GVN3 265 aa21.44■■□□□ 1.02
HOMER3-205ENST00000542541 HOXB9P17482 250 aaPredicted RBP21.44■■□□□ 1.02
HOMER3-205ENST00000542541 ANXA11P50995 505 aaKnown RBP21.44■■□□□ 1.02
HOMER3-205ENST00000542541 TXNL4AP83876 142 aaKnown RBP21.44■■□□□ 1.02
HOMER3-205ENST00000542541 Q0VFX4 171 aa21.44■■□□□ 1.02
HOMER3-205ENST00000542541 MFSD12Q6NUT3 480 aa21.44■■□□□ 1.02
HOMER3-205ENST00000542541 C9orf40Q8IXQ3 194 aa21.44■■□□□ 1.02
HOMER3-205ENST00000542541 KIF2BQ8N4N8 673 aa21.44■■□□□ 1.02
HOMER3-205ENST00000542541 GIMAP5Q96F15 307 aa21.44■■□□□ 1.02
HOMER3-205ENST00000542541 THOC3Q96J01 351 aaKnown RBP21.44■■□□□ 1.02
HOMER3-205ENST00000542541 ANKRD27Q96NW4 1050 aa21.44■■□□□ 1.02
HOMER3-205ENST00000542541 HOPXQ9BPY8 73 aaPredicted RBP21.44■■□□□ 1.02
HOMER3-205ENST00000542541 ACTRT3Q9BYD9 372 aa21.44■■□□□ 1.02
HOMER3-205ENST00000542541 EPS8L2Q9H6S3 715 aa21.44■■□□□ 1.02
HOMER3-205ENST00000542541 FOLH1BQ9HBA9 442 aa21.44■■□□□ 1.02
HOMER3-205ENST00000542541 GPATCH2Q9NW75 528 aa21.44■■□□□ 1.02
HOMER3-205ENST00000542541 ITGA3P26006 1051 aa21.44■■□□□ 1.02
HOMER3-205ENST00000542541 SOX8P57073 446 aa21.44■■□□□ 1.02
HOMER3-205ENST00000542541 MXRA7P84157 204 aa21.44■■□□□ 1.02
HOMER3-205ENST00000542541 ZNF155Q12901 538 aaPredicted RBP21.44■■□□□ 1.02
HOMER3-205ENST00000542541 LASP1Q14847 261 aaKnown RBP21.44■■□□□ 1.02
HOMER3-205ENST00000542541 EBPQ15125 230 aaKnown RBP21.44■■□□□ 1.02
HOMER3-205ENST00000542541 RUNDC3AQ59EK9 446 aa21.44■■□□□ 1.02
HOMER3-205ENST00000542541 MSRB3Q8IXL7 192 aa21.44■■□□□ 1.02
HOMER3-205ENST00000542541 SLC5A8Q8N695 610 aa21.44■■□□□ 1.02
HOMER3-205ENST00000542541 C17orf47Q8NEP4 570 aa21.44■■□□□ 1.02
HOMER3-205ENST00000542541 AURKBQ96GD4 344 aaPredicted RBP21.44■■□□□ 1.02
HOMER3-205ENST00000542541 SLC35G5Q96KT7 338 aa21.44■■□□□ 1.02
HOMER3-205ENST00000542541 VSTM2LQ96N03 204 aa21.44■■□□□ 1.02
HOMER3-205ENST00000542541 GAL3ST4Q96RP7 486 aa21.44■■□□□ 1.02
HOMER3-205ENST00000542541 LHPPQ9H008 270 aa21.44■■□□□ 1.02
HOMER3-205ENST00000542541 CPNE5Q9HCH3 593 aa21.44■■□□□ 1.02
HOMER3-205ENST00000542541 C15orf38-AP3S2A0A0A6YYH1 394 aa21.43■■□□□ 1.02
HOMER3-205ENST00000542541 DUXAA6NLW8 204 aa21.43■■□□□ 1.02
HOMER3-205ENST00000542541 MASP2O00187 686 aa21.43■■□□□ 1.02
HOMER3-205ENST00000542541 CELA2AP08217 269 aa21.43■■□□□ 1.02
HOMER3-205ENST00000542541 T-ENOLP0DO92 83 aa21.43■■□□□ 1.02
HOMER3-205ENST00000542541 ITGAMP11215 1152 aa21.43■■□□□ 1.02
HOMER3-205ENST00000542541 MATN1P21941 496 aa21.43■■□□□ 1.02
HOMER3-205ENST00000542541 PPICP45877 212 aa21.43■■□□□ 1.02
HOMER3-205ENST00000542541 CHAF1BQ13112 559 aa21.43■■□□□ 1.02
HOMER3-205ENST00000542541 ARPINQ7Z6K5 226 aa21.43■■□□□ 1.02
HOMER3-205ENST00000542541 APLFQ8IW19 511 aaPredicted RBP21.43■■□□□ 1.02
HOMER3-205ENST00000542541 GALNT16Q8N428 558 aa21.43■■□□□ 1.02
HOMER3-205ENST00000542541 MIPOL1Q8TD10 442 aa21.43■■□□□ 1.02
HOMER3-205ENST00000542541 TP53INP1Q96A56 240 aa21.43■■□□□ 1.02
HOMER3-205ENST00000542541 THUMPD3Q9BV44 507 aaKnown RBP21.43■■□□□ 1.02
HOMER3-205ENST00000542541 WWTR1Q9GZV5 400 aa21.43■■□□□ 1.02
HOMER3-205ENST00000542541 NUP214P35658 2090 aaPredicted RBP21.43■■□□□ 1.02
HOMER3-205ENST00000542541 B2RBV5 119 aa21.42■■□□□ 1.02
HOMER3-205ENST00000542541 DRD5P21918 477 aa21.42■■□□□ 1.02
HOMER3-205ENST00000542541 PSPHP78330 225 aa21.42■■□□□ 1.02
HOMER3-205ENST00000542541 CAPRIN1Q14444 709 aaKnown RBP21.42■■□□□ 1.02
HOMER3-205ENST00000542541 NANOGP8Q6NSW7 305 aa21.42■■□□□ 1.02
HOMER3-205ENST00000542541 CDC73Q6P1J9 531 aa21.42■■□□□ 1.02
HOMER3-205ENST00000542541 RNF130Q86XS8 419 aa21.42■■□□□ 1.02
HOMER3-205ENST00000542541 AMER2Q8N7J2 671 aa21.42■■□□□ 1.02
HOMER3-205ENST00000542541 OR8J3Q8NGG0 315 aa21.42■■□□□ 1.02
HOMER3-205ENST00000542541 OR52N2Q8NGI0 321 aa21.42■■□□□ 1.02
HOMER3-205ENST00000542541 ADAMTS15Q8TE58 950 aa21.42■■□□□ 1.02
HOMER3-205ENST00000542541 JADE3Q92613 823 aa21.42■■□□□ 1.02
HOMER3-205ENST00000542541 C16orf58Q96GQ5 468 aa21.42■■□□□ 1.02
HOMER3-205ENST00000542541 LMF2Q9BU23 707 aaKnown RBP21.42■■□□□ 1.02
HOMER3-205ENST00000542541 NANOGQ9H9S0 305 aa21.42■■□□□ 1.02
HOMER3-205ENST00000542541 RYDENQ9NUL5 291 aaKnown RBP21.42■■□□□ 1.02
HOMER3-205ENST00000542541 GIN1Q9NXP7 522 aa21.42■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms