RNA–Protein interactions for RNA: ENST00000542068.5

CNOT9-208, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CNOT9, Length 3,259 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-208ENST00000542068 HHIPL1Q96JK4 782 aa14.48□□□□□ -0.09
CNOT9-208ENST00000542068 MAGEB10Q96LZ2 347 aaPredicted RBP14.48□□□□□ -0.09
CNOT9-208ENST00000542068 NPAP1Q9NZP6 1156 aa14.48□□□□□ -0.09
CNOT9-208ENST00000542068 KLHL42Q9P2K6 505 aa14.48□□□□□ -0.09
CNOT9-208ENST00000542068 NPIPB8E9PQR5 432 aa14.47□□□□□ -0.09
CNOT9-208ENST00000542068 POLR1CO15160 346 aaPredicted RBP14.47□□□□□ -0.09
CNOT9-208ENST00000542068 EFEMP2O95967 443 aa14.47□□□□□ -0.09
CNOT9-208ENST00000542068 FGBP02675 491 aa14.47□□□□□ -0.09
CNOT9-208ENST00000542068 C8orf89P0DMQ9 161 aa14.47□□□□□ -0.09
CNOT9-208ENST00000542068 MMP12P39900 470 aa14.47□□□□□ -0.09
CNOT9-208ENST00000542068 MAP2K3P46734 347 aa14.47□□□□□ -0.09
CNOT9-208ENST00000542068 FABP5Q01469 135 aa14.47□□□□□ -0.09
CNOT9-208ENST00000542068 ILKQ13418 452 aa14.47□□□□□ -0.09
CNOT9-208ENST00000542068 GPR19Q15760 415 aa14.47□□□□□ -0.09
CNOT9-208ENST00000542068 SLC35F1Q5T1Q4 408 aa14.47□□□□□ -0.09
CNOT9-208ENST00000542068 ZER1Q7Z7L7 766 aa14.47□□□□□ -0.09
CNOT9-208ENST00000542068 PROKR2Q8NFJ6 384 aa14.47□□□□□ -0.09
CNOT9-208ENST00000542068 OR8D1Q8WZ84 308 aa14.47□□□□□ -0.09
CNOT9-208ENST00000542068 ZCCHC2Q9C0B9 1178 aaKnown RBP14.47□□□□□ -0.09
CNOT9-208ENST00000542068 CLCA2Q9UQC9 943 aa14.47□□□□□ -0.09
CNOT9-208ENST00000542068 KCNK6Q9Y257 313 aa14.47□□□□□ -0.09
CNOT9-208ENST00000542068 PCYT1BQ9Y5K3 369 aaPredicted RBP14.47□□□□□ -0.09
CNOT9-208ENST00000542068 TRPM6Q9BX84 2022 aa14.47□□□□□ -0.09
CNOT9-208ENST00000542068 ARID1BQ8NFD5 2236 aaPredicted RBP14.47□□□□□ -0.09
CNOT9-208ENST00000542068 HELZP42694 1942 aaKnown RBP14.47□□□□□ -0.09
CNOT9-208ENST00000542068 OTOL1A6NHN0 477 aaPredicted RBP14.47□□□□□ -0.09
CNOT9-208ENST00000542068 HRO43593 1189 aa14.47□□□□□ -0.09
CNOT9-208ENST00000542068 ALX3O95076 343 aa14.47□□□□□ -0.09
CNOT9-208ENST00000542068 RAB36O95755 333 aa14.47□□□□□ -0.09
CNOT9-208ENST00000542068 PRLHRP49683 370 aa14.47□□□□□ -0.09
CNOT9-208ENST00000542068 HMGA2P52926 109 aa14.47□□□□□ -0.09
CNOT9-208ENST00000542068 E2F2Q14209 437 aa14.47□□□□□ -0.09
CNOT9-208ENST00000542068 GLYR1Q49A26 553 aaPredicted RBP14.47□□□□□ -0.09
CNOT9-208ENST00000542068 XKRXQ6PP77 449 aa14.47□□□□□ -0.09
CNOT9-208ENST00000542068 FAM83HQ6ZRV2 1179 aaPredicted RBP14.47□□□□□ -0.09
CNOT9-208ENST00000542068 C17orf64Q86WR6 236 aa14.47□□□□□ -0.09
CNOT9-208ENST00000542068 MARCH9Q86YJ5 346 aa14.47□□□□□ -0.09
CNOT9-208ENST00000542068 ZNF582Q96NG8 517 aaPredicted RBP14.47□□□□□ -0.09
CNOT9-208ENST00000542068 BRWD1Q9NSI6 2320 aa14.47□□□□□ -0.09
CNOT9-208ENST00000542068 A0A0X1KG70 313 aa14.47□□□□□ -0.09
CNOT9-208ENST00000542068 ZSCAN5BA6NJL1 495 aa14.47□□□□□ -0.09
CNOT9-208ENST00000542068 SLC30A4O14863 429 aa14.47□□□□□ -0.09
CNOT9-208ENST00000542068 B4GALT2O60909 372 aa14.47□□□□□ -0.09
CNOT9-208ENST00000542068 UQCRC2P22695 453 aa14.47□□□□□ -0.09
CNOT9-208ENST00000542068 SLC9A3P48764 834 aa14.47□□□□□ -0.09
CNOT9-208ENST00000542068 MLLT11Q13015 90 aaPredicted RBP14.47□□□□□ -0.09
CNOT9-208ENST00000542068 KCNC3Q14003 757 aa14.47□□□□□ -0.09
CNOT9-208ENST00000542068 ZNF750Q32MQ0 723 aa14.47□□□□□ -0.09
CNOT9-208ENST00000542068 OR5H6Q8NGV6 325 aa14.47□□□□□ -0.09
CNOT9-208ENST00000542068 ARRDC3Q96B67 414 aa14.47□□□□□ -0.09
CNOT9-208ENST00000542068 RNF170Q96K19 258 aa14.47□□□□□ -0.09
CNOT9-208ENST00000542068 MGAT4BQ9UQ53 548 aa14.47□□□□□ -0.09
CNOT9-208ENST00000542068 PLXND1Q9Y4D7 1925 aa14.47□□□□□ -0.09
CNOT9-208ENST00000542068 A0A0G2JMP0 313 aa14.46□□□□□ -0.09
CNOT9-208ENST00000542068 SLC5A10A0PJK1 596 aa14.46□□□□□ -0.09
CNOT9-208ENST00000542068 GRXCR1A8MXD5 290 aa14.46□□□□□ -0.09
CNOT9-208ENST00000542068 PPM1FP49593 454 aaPredicted RBP14.46□□□□□ -0.09
CNOT9-208ENST00000542068 CSTF1Q05048 431 aaKnown RBP14.46□□□□□ -0.09
CNOT9-208ENST00000542068 CAMKMTQ7Z624 323 aa14.46□□□□□ -0.09
CNOT9-208ENST00000542068 REM2Q8IYK8 340 aaPredicted RBP14.46□□□□□ -0.09
CNOT9-208ENST00000542068 AMER3Q8N944 861 aa14.46□□□□□ -0.09
CNOT9-208ENST00000542068 ZBED6CLQ96FA7 236 aaPredicted RBP14.46□□□□□ -0.09
CNOT9-208ENST00000542068 MRGPRX3Q96LB0 322 aa14.46□□□□□ -0.09
CNOT9-208ENST00000542068 DHRS1Q96LJ7 313 aa14.46□□□□□ -0.09
CNOT9-208ENST00000542068 TREX2Q9BQ50 279 aaPredicted RBP14.46□□□□□ -0.09
CNOT9-208ENST00000542068 CAPN10Q9HC96 672 aa14.46□□□□□ -0.09
CNOT9-208ENST00000542068 B3GAT2Q9NPZ5 323 aa14.46□□□□□ -0.09
CNOT9-208ENST00000542068 MAPRE3Q9UPY8 281 aa14.46□□□□□ -0.09
CNOT9-208ENST00000542068 IGLON5A6NGN9 336 aa14.46□□□□□ -0.09
CNOT9-208ENST00000542068 QSOX1O00391 747 aa14.46□□□□□ -0.09
CNOT9-208ENST00000542068 PDPK1O15530 556 aa14.46□□□□□ -0.09
CNOT9-208ENST00000542068 LALBAP00709 142 aa14.46□□□□□ -0.09
CNOT9-208ENST00000542068 PRNPP04156 253 aa14.46□□□□□ -0.09
CNOT9-208ENST00000542068 GIPRP48546 466 aa14.46□□□□□ -0.09
CNOT9-208ENST00000542068 PNLIPRP1P54315 467 aa14.46□□□□□ -0.09
CNOT9-208ENST00000542068 SMUG1Q53HV7 270 aa14.46□□□□□ -0.09
CNOT9-208ENST00000542068 NXPE4Q6UWF7 544 aa14.46□□□□□ -0.09
CNOT9-208ENST00000542068 AMZ2Q86W34 360 aa14.46□□□□□ -0.09
CNOT9-208ENST00000542068 ADGRF3Q8IZF5 1079 aa14.46□□□□□ -0.09
CNOT9-208ENST00000542068 OR6T1Q8NGN1 323 aa14.46□□□□□ -0.09
CNOT9-208ENST00000542068 COL26A1Q96A83 441 aa14.46□□□□□ -0.09
CNOT9-208ENST00000542068 ARSGQ96EG1 525 aa14.46□□□□□ -0.09
CNOT9-208ENST00000542068 FERD3LQ96RJ6 166 aa14.46□□□□□ -0.09
CNOT9-208ENST00000542068 TRMT61BQ9BVS5 477 aaKnown RBP14.46□□□□□ -0.09
CNOT9-208ENST00000542068 TEX10Q9NXF1 929 aaPredicted RBP14.46□□□□□ -0.09
CNOT9-208ENST00000542068 FBXW2Q9UKT8 454 aa14.46□□□□□ -0.09
CNOT9-208ENST00000542068 INSL6Q9Y581 213 aa14.46□□□□□ -0.09
CNOT9-208ENST00000542068 SCN3AQ9NY46 2000 aa14.46□□□□□ -0.1
CNOT9-208ENST00000542068 A0A1W2PQ72 361 aa14.46□□□□□ -0.1
CNOT9-208ENST00000542068 LILRB3O75022 631 aa14.46□□□□□ -0.1
CNOT9-208ENST00000542068 MOSPD3O75425 235 aa14.46□□□□□ -0.1
CNOT9-208ENST00000542068 TIMP1P01033 207 aa14.46□□□□□ -0.1
CNOT9-208ENST00000542068 DDX5P17844 614 aaKnown RBP14.46□□□□□ -0.1
CNOT9-208ENST00000542068 CCT3P49368 545 aaKnown RBP14.46□□□□□ -0.1
CNOT9-208ENST00000542068 SEC13P55735 322 aa14.46□□□□□ -0.1
CNOT9-208ENST00000542068 SNRPGP62308 76 aaKnown RBP14.46□□□□□ -0.1
CNOT9-208ENST00000542068 ASAH1Q13510 395 aa14.46□□□□□ -0.1
CNOT9-208ENST00000542068 ELMOD2Q8IZ81 293 aa14.46□□□□□ -0.1
CNOT9-208ENST00000542068 BADQ92934 168 aa14.46□□□□□ -0.1
CNOT9-208ENST00000542068 DTD2Q96FN9 168 aa14.46□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms