RNA–Protein interactions for RNA: ENST00000542002.5

YBX3-212, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-212ENST00000542002 NPFFR2Q9Y5X5 522 aa8.96□□□□□ -0.98
YBX3-212ENST00000542002 WIPF3A6NGB9 483 aa8.95□□□□□ -0.98
YBX3-212ENST00000542002 KLRC4-KLRK1H3BQV0 150 aa8.95□□□□□ -0.98
YBX3-212ENST00000542002 UPK1AO00322 258 aa8.95□□□□□ -0.98
YBX3-212ENST00000542002 PLOD2O00469 737 aa8.95□□□□□ -0.98
YBX3-212ENST00000542002 HS6ST1O60243 411 aa8.95□□□□□ -0.98
YBX3-212ENST00000542002 TBX19O60806 448 aa8.95□□□□□ -0.98
YBX3-212ENST00000542002 PDE9AO76083 593 aa8.95□□□□□ -0.98
YBX3-212ENST00000542002 CELA3AP09093 270 aa8.95□□□□□ -0.98
YBX3-212ENST00000542002 RFPL3SP0C7P2 107 aa8.95□□□□□ -0.98
YBX3-212ENST00000542002 LAMP1P11279 417 aa8.95□□□□□ -0.98
YBX3-212ENST00000542002 G6PDP11413 515 aa8.95□□□□□ -0.98
YBX3-212ENST00000542002 DRD5P21918 477 aa8.95□□□□□ -0.98
YBX3-212ENST00000542002 ABCD3P28288 659 aa8.95□□□□□ -0.98
YBX3-212ENST00000542002 MC3RP41968 323 aa8.95□□□□□ -0.98
YBX3-212ENST00000542002 FRKP42685 505 aaPredicted RBP8.95□□□□□ -0.98
YBX3-212ENST00000542002 PPICP45877 212 aa8.95□□□□□ -0.98
YBX3-212ENST00000542002 CORO7P57737 925 aa8.95□□□□□ -0.98
YBX3-212ENST00000542002 EMX2Q04743 252 aa8.95□□□□□ -0.98
YBX3-212ENST00000542002 ATP6AP1LQ52LC2 224 aa8.95□□□□□ -0.98
YBX3-212ENST00000542002 PRAMEF20Q5VT98 475 aa8.95□□□□□ -0.98
YBX3-212ENST00000542002 SLC22A10Q63ZE4 541 aa8.95□□□□□ -0.98
YBX3-212ENST00000542002 TMEM107Q6UX40 140 aa8.95□□□□□ -0.98
YBX3-212ENST00000542002 GFRALQ6UXV0 394 aa8.95□□□□□ -0.98
YBX3-212ENST00000542002 NPSR1Q6W5P4 371 aa8.95□□□□□ -0.98
YBX3-212ENST00000542002 WDR53Q7Z5U6 358 aaPredicted RBP8.95□□□□□ -0.98
YBX3-212ENST00000542002 RIMKLAQ8IXN7 391 aa8.95□□□□□ -0.98
YBX3-212ENST00000542002 GOLM1Q8NBJ4 401 aa8.95□□□□□ -0.98
YBX3-212ENST00000542002 C17orf47Q8NEP4 570 aa8.95□□□□□ -0.98
YBX3-212ENST00000542002 OR7A2PQ8NGA2 310 aa8.95□□□□□ -0.98
YBX3-212ENST00000542002 SLC22A8Q8TCC7 542 aa8.95□□□□□ -0.98
YBX3-212ENST00000542002 TUBGCP3Q96CW5 907 aa8.95□□□□□ -0.98
YBX3-212ENST00000542002 ELP4Q96EB1 424 aa8.95□□□□□ -0.98
YBX3-212ENST00000542002 LCORQ96JN0 433 aaPredicted RBP8.95□□□□□ -0.98
YBX3-212ENST00000542002 PPP3R2Q96LZ3 170 aa8.95□□□□□ -0.98
YBX3-212ENST00000542002 VSTM2LQ96N03 204 aa8.95□□□□□ -0.98
YBX3-212ENST00000542002 GPR137Q96N19 417 aa8.95□□□□□ -0.98
YBX3-212ENST00000542002 NUF2Q9BZD4 464 aa8.95□□□□□ -0.98
YBX3-212ENST00000542002 STMN4Q9H169 189 aaPredicted RBP8.95□□□□□ -0.98
YBX3-212ENST00000542002 DEFB127Q9H1M4 99 aa8.95□□□□□ -0.98
YBX3-212ENST00000542002 MIEF1Q9NQG6 463 aa8.95□□□□□ -0.98
YBX3-212ENST00000542002 TUBA8Q9NY65 449 aaPredicted RBP8.95□□□□□ -0.98
YBX3-212ENST00000542002 ENTPD4Q9Y227 616 aa8.95□□□□□ -0.98
YBX3-212ENST00000542002 MYO18BQ8IUG5 2567 aa8.94□□□□□ -0.98
YBX3-212ENST00000542002 NBPF19A0A087WUL8 3843 aa8.94□□□□□ -0.98
YBX3-212ENST00000542002 FAM166BA8MTA8 275 aa8.94□□□□□ -0.98
YBX3-212ENST00000542002 ZNF195O14628 629 aa8.94□□□□□ -0.98
YBX3-212ENST00000542002 TO15178 435 aa8.94□□□□□ -0.98
YBX3-212ENST00000542002 LRRTM2O43300 516 aa8.94□□□□□ -0.98
YBX3-212ENST00000542002 PSMG1O95456 288 aa8.94□□□□□ -0.98
YBX3-212ENST00000542002 STSP08842 583 aa8.94□□□□□ -0.98
YBX3-212ENST00000542002 ZNF24P17028 368 aa8.94□□□□□ -0.98
YBX3-212ENST00000542002 DIO3P55073 304 aa8.94□□□□□ -0.98
YBX3-212ENST00000542002 PPIAP62937 165 aaKnown RBP8.94□□□□□ -0.98
YBX3-212ENST00000542002 PSG6Q00889 435 aa8.94□□□□□ -0.98
YBX3-212ENST00000542002 OCRLQ01968 901 aa8.94□□□□□ -0.98
YBX3-212ENST00000542002 KRTCAP3Q53RY4 240 aa8.94□□□□□ -0.98
YBX3-212ENST00000542002 FNDC7Q5VTL7 733 aa8.94□□□□□ -0.98
YBX3-212ENST00000542002 C1QL3Q5VWW1 255 aa8.94□□□□□ -0.98
YBX3-212ENST00000542002 HLA-DQA1Q5Y7H0 255 aa8.94□□□□□ -0.98
YBX3-212ENST00000542002 FAM47EQ6ZV65 393 aa8.94□□□□□ -0.98
YBX3-212ENST00000542002 LARP4Q71RC2 724 aaKnown RBP eCLIP8.94□□□□□ -0.984e-6■■□□□ 12.8
YBX3-212ENST00000542002 HDXQ7Z353 690 aa8.94□□□□□ -0.98
YBX3-212ENST00000542002 MAVSQ7Z434 540 aa8.94□□□□□ -0.98
YBX3-212ENST00000542002 SAMD14Q8IZD0 417 aaPredicted RBP8.94□□□□□ -0.98
YBX3-212ENST00000542002 FAM9CQ8IZT9 166 aa8.94□□□□□ -0.98
YBX3-212ENST00000542002 TAGAPQ8N103 731 aa8.94□□□□□ -0.98
YBX3-212ENST00000542002 OR2L13Q8N349 312 aa8.94□□□□□ -0.98
YBX3-212ENST00000542002 TMEM251Q8N6I4 163 aa8.94□□□□□ -0.98
YBX3-212ENST00000542002 FNDC5Q8NAU1 212 aa8.94□□□□□ -0.98
YBX3-212ENST00000542002 FAM13CQ8NE31 585 aa8.94□□□□□ -0.98
YBX3-212ENST00000542002 SPPL2AQ8TCT8 520 aa8.94□□□□□ -0.98
YBX3-212ENST00000542002 ZNF75CPQ92670 426 aaPredicted RBP8.94□□□□□ -0.98
YBX3-212ENST00000542002 HGDQ93099 445 aa8.94□□□□□ -0.98
YBX3-212ENST00000542002 PPCDCQ96CD2 204 aa8.94□□□□□ -0.98
YBX3-212ENST00000542002 ERP27Q96DN0 273 aa8.94□□□□□ -0.98
YBX3-212ENST00000542002 ZNF764Q96H86 408 aaPredicted RBP8.94□□□□□ -0.98
YBX3-212ENST00000542002 MAGED4Q96JG8 741 aa8.94□□□□□ -0.98
YBX3-212ENST00000542002 ATP6V1G3Q96LB4 118 aa8.94□□□□□ -0.98
YBX3-212ENST00000542002 PSMG3-AS1Q96PY0 264 aa8.94□□□□□ -0.98
YBX3-212ENST00000542002 BTBD9Q96Q07 612 aa8.94□□□□□ -0.98
YBX3-212ENST00000542002 NODALQ96S42 347 aa8.94□□□□□ -0.98
YBX3-212ENST00000542002 FAM173AQ9BQD7 235 aa8.94□□□□□ -0.98
YBX3-212ENST00000542002 TTTY12Q9BZ98 90 aa8.94□□□□□ -0.98
YBX3-212ENST00000542002 MANSC1Q9H8J5 431 aa8.94□□□□□ -0.98
YBX3-212ENST00000542002 MEAF6Q9HAF1 191 aa8.94□□□□□ -0.98
YBX3-212ENST00000542002 FOLH1BQ9HBA9 442 aa8.94□□□□□ -0.98
YBX3-212ENST00000542002 SACM1LQ9NTJ5 587 aa8.94□□□□□ -0.98
YBX3-212ENST00000542002 GIMAP4Q9NUV9 329 aa8.94□□□□□ -0.98
YBX3-212ENST00000542002 THAP1Q9NVV9 213 aa8.94□□□□□ -0.98
YBX3-212ENST00000542002 ZNF446Q9NWS9 450 aa8.94□□□□□ -0.98
YBX3-212ENST00000542002 SH3BP4Q9P0V3 963 aa8.94□□□□□ -0.98
YBX3-212ENST00000542002 ATP6V1HQ9UI12 483 aa8.94□□□□□ -0.98
YBX3-212ENST00000542002 C19orf53Q9UNZ5 99 aaPredicted RBP8.94□□□□□ -0.98
YBX3-212ENST00000542002 ZNF835Q9Y2P0 537 aa8.94□□□□□ -0.98
YBX3-212ENST00000542002 GIMAP1-GIMAP5A0A087WTJ2 511 aa8.93□□□□□ -0.98
YBX3-212ENST00000542002 A0A087WV62 115 aa8.93□□□□□ -0.98
YBX3-212ENST00000542002 A0A1B0GTH9 108 aa8.93□□□□□ -0.98
YBX3-212ENST00000542002 C2orf72A6NCS6 295 aa8.93□□□□□ -0.98
YBX3-212ENST00000542002 FRG2CA6NGY1 282 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms