RNA–Protein interactions for RNA: ENST00000540931.1

CLSTN3-210, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-210ENST00000540931 A6NL46 340 aa16.25■□□□□ 0.19
CLSTN3-210ENST00000540931 BBIP1A8MTZ0 92 aa16.25■□□□□ 0.19
CLSTN3-210ENST00000540931 RFXANKO14593 260 aa16.25■□□□□ 0.19
CLSTN3-210ENST00000540931 ANP32DO95626 131 aa16.25■□□□□ 0.19
CLSTN3-210ENST00000540931 NPPAP01160 153 aa16.25■□□□□ 0.19
CLSTN3-210ENST00000540931 ZCCHC18P0CG32 403 aa16.25■□□□□ 0.19
CLSTN3-210ENST00000540931 TRHRP34981 398 aaPredicted RBP16.25■□□□□ 0.19
CLSTN3-210ENST00000540931 MC3RP41968 323 aa16.25■□□□□ 0.19
CLSTN3-210ENST00000540931 SSR4P51571 173 aa16.25■□□□□ 0.19
CLSTN3-210ENST00000540931 PSMD4P55036 377 aaKnown RBP16.25■□□□□ 0.19
CLSTN3-210ENST00000540931 NME5P56597 212 aa16.25■□□□□ 0.19
CLSTN3-210ENST00000540931 MLF1P58340 268 aa16.25■□□□□ 0.19
CLSTN3-210ENST00000540931 STX5Q13190 355 aa16.25■□□□□ 0.19
CLSTN3-210ENST00000540931 EBPQ15125 230 aaKnown RBP16.25■□□□□ 0.19
CLSTN3-210ENST00000540931 COQ5Q5HYK3 327 aa16.25■□□□□ 0.19
CLSTN3-210ENST00000540931 FAM111BQ6SJ93 734 aa16.25■□□□□ 0.19
CLSTN3-210ENST00000540931 TMEM107Q6UX40 140 aa16.25■□□□□ 0.19
CLSTN3-210ENST00000540931 DGAT2L6Q6ZPD8 337 aa16.25■□□□□ 0.19
CLSTN3-210ENST00000540931 ZNF551Q7Z340 670 aaPredicted RBP16.25■□□□□ 0.19
CLSTN3-210ENST00000540931 TMEM156Q8N614 296 aa16.25■□□□□ 0.19
CLSTN3-210ENST00000540931 OR4A15Q8NGL6 344 aa16.25■□□□□ 0.19
CLSTN3-210ENST00000540931 C16orf52Q8NHV5 167 aa16.25■□□□□ 0.19
CLSTN3-210ENST00000540931 PSMF1Q92530 271 aa16.25■□□□□ 0.19
CLSTN3-210ENST00000540931 KAT2AQ92830 837 aa16.25■□□□□ 0.19
CLSTN3-210ENST00000540931 SPDL1Q96EA4 605 aa16.25■□□□□ 0.19
CLSTN3-210ENST00000540931 LCORQ96JN0 433 aaPredicted RBP16.25■□□□□ 0.19
CLSTN3-210ENST00000540931 WWTR1Q9GZV5 400 aa16.25■□□□□ 0.19
CLSTN3-210ENST00000540931 RAD21L1Q9H4I0 556 aa16.25■□□□□ 0.19
CLSTN3-210ENST00000540931 CDCP1Q9H5V8 836 aa16.25■□□□□ 0.19
CLSTN3-210ENST00000540931 ZNF385DQ9H6B1 395 aa16.25■□□□□ 0.19
CLSTN3-210ENST00000540931 SLAMF7Q9NQ25 335 aa16.25■□□□□ 0.19
CLSTN3-210ENST00000540931 ZCCHC3Q9NUD5 404 aaKnown RBP16.25■□□□□ 0.19
CLSTN3-210ENST00000540931 THUMPD1Q9NXG2 353 aaKnown RBP16.25■□□□□ 0.19
CLSTN3-210ENST00000540931 FAF1Q9UNN5 650 aaPredicted RBP16.25■□□□□ 0.19
CLSTN3-210ENST00000540931 SNX8Q9Y5X2 465 aa16.25■□□□□ 0.19
CLSTN3-210ENST00000540931 CAPN7Q9Y6W3 813 aa16.25■□□□□ 0.19
CLSTN3-210ENST00000540931 FRG2CA6NGY1 282 aa16.24■□□□□ 0.19
CLSTN3-210ENST00000540931 CYSRT1A8MQ03 144 aa16.24■□□□□ 0.19
CLSTN3-210ENST00000540931 UPK1AO00322 258 aa16.24■□□□□ 0.19
CLSTN3-210ENST00000540931 ANGPT2O15123 496 aa16.24■□□□□ 0.19
CLSTN3-210ENST00000540931 SCN2BO60939 215 aa16.24■□□□□ 0.19
CLSTN3-210ENST00000540931 ABCB7O75027 752 aa16.24■□□□□ 0.19
CLSTN3-210ENST00000540931 ERN1O75460 977 aaKnown RBP16.24■□□□□ 0.19
CLSTN3-210ENST00000540931 DNAJB5O75953 348 aa16.24■□□□□ 0.19
CLSTN3-210ENST00000540931 KRT75O95678 551 aa16.24■□□□□ 0.19
CLSTN3-210ENST00000540931 C6orf47O95873 294 aa16.24■□□□□ 0.19
CLSTN3-210ENST00000540931 CBX7O95931 251 aa16.24■□□□□ 0.19
CLSTN3-210ENST00000540931 SNRPB2P08579 225 aaKnown RBP16.24■□□□□ 0.19
CLSTN3-210ENST00000540931 CT62P0C5K7 136 aa16.24■□□□□ 0.19
CLSTN3-210ENST00000540931 PPIBP23284 216 aaKnown RBP16.24■□□□□ 0.19
CLSTN3-210ENST00000540931 SSTR4P31391 388 aa16.24■□□□□ 0.19
CLSTN3-210ENST00000540931 CYB561P49447 251 aa16.24■□□□□ 0.19
CLSTN3-210ENST00000540931 WNT3P56703 355 aa16.24■□□□□ 0.19
CLSTN3-210ENST00000540931 HBA1P69905 142 aa16.24■□□□□ 0.19
CLSTN3-210ENST00000540931 MRPS35P82673 323 aaKnown RBP16.24■□□□□ 0.19
CLSTN3-210ENST00000540931 CYP27C1Q4G0S4 372 aa16.24■□□□□ 0.19
CLSTN3-210ENST00000540931 LACTB2Q53H82 288 aaPredicted RBP16.24■□□□□ 0.19
CLSTN3-210ENST00000540931 PIGGQ5H8A4 983 aa16.24■□□□□ 0.19
CLSTN3-210ENST00000540931 FHL5Q5TD97 284 aa16.24■□□□□ 0.19
CLSTN3-210ENST00000540931 FAM180BQ6P0A1 224 aa16.24■□□□□ 0.19
CLSTN3-210ENST00000540931 SIRT6Q8N6T7 355 aa16.24■□□□□ 0.19
CLSTN3-210ENST00000540931 NUP43Q8NFH3 380 aa16.24■□□□□ 0.19
CLSTN3-210ENST00000540931 OR7G2Q8NG99 324 aa16.24■□□□□ 0.19
CLSTN3-210ENST00000540931 ABHD17AQ96GS6 310 aa16.24■□□□□ 0.19
CLSTN3-210ENST00000540931 MARK4Q96L34 752 aa16.24■□□□□ 0.19
CLSTN3-210ENST00000540931 SGCZQ96LD1 299 aa16.24■□□□□ 0.19
CLSTN3-210ENST00000540931 TEX37Q96LM6 180 aa16.24■□□□□ 0.19
CLSTN3-210ENST00000540931 BTBD9Q96Q07 612 aa16.24■□□□□ 0.19
CLSTN3-210ENST00000540931 MESP1Q9BRJ9 268 aa16.24■□□□□ 0.19
CLSTN3-210ENST00000540931 UTP23Q9BRU9 249 aaKnown RBP16.24■□□□□ 0.19
CLSTN3-210ENST00000540931 Q9N2J8 555 aa16.24■□□□□ 0.19
CLSTN3-210ENST00000540931 SAR1AQ9NR31 198 aa16.24■□□□□ 0.19
CLSTN3-210ENST00000540931 LEF1Q9UJU2 399 aaPredicted RBP16.24■□□□□ 0.19
CLSTN3-210ENST00000540931 CORO2BQ9UQ03 480 aa16.24■□□□□ 0.19
CLSTN3-210ENST00000540931 NDUFAF1Q9Y375 327 aa16.24■□□□□ 0.19
CLSTN3-210ENST00000540931 PCDHGB6Q9Y5F9 930 aa16.24■□□□□ 0.19
CLSTN3-210ENST00000540931 A0A1W2PS29 197 aa16.23■□□□□ 0.19
CLSTN3-210ENST00000540931 TO15178 435 aa16.23■□□□□ 0.19
CLSTN3-210ENST00000540931 ITGA10O75578 1167 aa16.23■□□□□ 0.19
CLSTN3-210ENST00000540931 PSMG1O95456 288 aa16.23■□□□□ 0.19
CLSTN3-210ENST00000540931 IL12AP29459 219 aa16.23■□□□□ 0.19
CLSTN3-210ENST00000540931 LCN1P31025 176 aa16.23■□□□□ 0.19
CLSTN3-210ENST00000540931 KRT20P35900 424 aa16.23■□□□□ 0.19
CLSTN3-210ENST00000540931 EMDP50402 254 aa16.23■□□□□ 0.19
CLSTN3-210ENST00000540931 ARG2P78540 354 aa16.23■□□□□ 0.19
CLSTN3-210ENST00000540931 DUSP2Q05923 314 aa16.23■□□□□ 0.19
CLSTN3-210ENST00000540931 LTB4RQ15722 352 aa16.23■□□□□ 0.19
CLSTN3-210ENST00000540931 LINC00303Q3SY05 128 aa16.23■□□□□ 0.19
CLSTN3-210ENST00000540931 C9orf40Q8IXQ3 194 aa16.23■□□□□ 0.19
CLSTN3-210ENST00000540931 PCYOX1LQ8NBM8 494 aa16.23■□□□□ 0.19
CLSTN3-210ENST00000540931 RP9Q8TA86 221 aaKnown RBP16.23■□□□□ 0.19
CLSTN3-210ENST00000540931 ASB15Q8WXK1 588 aa16.23■□□□□ 0.19
CLSTN3-210ENST00000540931 TMEM125Q96AQ2 219 aa16.23■□□□□ 0.19
CLSTN3-210ENST00000540931 FAM120BQ96EK7 910 aaKnown RBP16.23■□□□□ 0.19
CLSTN3-210ENST00000540931 PHF12Q96QT6 1004 aa16.23■□□□□ 0.19
CLSTN3-210ENST00000540931 GAL3ST4Q96RP7 486 aa16.23■□□□□ 0.19
CLSTN3-210ENST00000540931 STACQ99469 402 aa16.23■□□□□ 0.19
CLSTN3-210ENST00000540931 SLC25A18Q9H1K4 315 aa16.23■□□□□ 0.19
CLSTN3-210ENST00000540931 TRIM45Q9H8W5 580 aaPredicted RBP16.23■□□□□ 0.19
CLSTN3-210ENST00000540931 ZNF223Q9UK11 482 aaPredicted RBP16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 158.1 ms