RNA–Protein interactions for RNA: ENST00000540755.5

CYB561A3-216, Transcript of cytochrome b561 family member A3, humanhuman

TSL 1 (best)

Gene CYB561A3, Length 1,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-216ENST00000540755 CDC123O75794 336 aaPredicted RBP13.31□□□□□ -0.28
CYB561A3-216ENST00000540755 OR12D1P0DN82 309 aa13.31□□□□□ -0.28
CYB561A3-216ENST00000540755 FGF5P12034 268 aa13.31□□□□□ -0.28
CYB561A3-216ENST00000540755 CCKBRP32239 447 aa13.31□□□□□ -0.28
CYB561A3-216ENST00000540755 GALNSP34059 522 aa13.31□□□□□ -0.28
CYB561A3-216ENST00000540755 STT3AP46977 705 aa13.31□□□□□ -0.28
CYB561A3-216ENST00000540755 MAN2A2P49641 1150 aa13.31□□□□□ -0.28
CYB561A3-216ENST00000540755 CLCN2P51788 898 aa13.31□□□□□ -0.28
CYB561A3-216ENST00000540755 PDX1P52945 283 aa13.31□□□□□ -0.28
CYB561A3-216ENST00000540755 CRYBA2P53672 197 aa13.31□□□□□ -0.28
CYB561A3-216ENST00000540755 BTG2P78543 158 aa13.31□□□□□ -0.28
CYB561A3-216ENST00000540755 MAP4K2Q12851 820 aa13.31□□□□□ -0.28
CYB561A3-216ENST00000540755 ILKQ13418 452 aa13.31□□□□□ -0.28
CYB561A3-216ENST00000540755 ERV3-1Q14264 604 aa13.31□□□□□ -0.28
CYB561A3-216ENST00000540755 IL11RAQ14626 422 aa13.31□□□□□ -0.28
CYB561A3-216ENST00000540755 NKG7Q16617 165 aa13.31□□□□□ -0.28
CYB561A3-216ENST00000540755 ARHGAP40Q5TG30 622 aa13.31□□□□□ -0.28
CYB561A3-216ENST00000540755 HMBOX1Q6NT76 420 aa13.31□□□□□ -0.28
CYB561A3-216ENST00000540755 ZCCHC12Q6PEW1 402 aa13.31□□□□□ -0.28
CYB561A3-216ENST00000540755 QSOX2Q6ZRP7 698 aa13.31□□□□□ -0.28
CYB561A3-216ENST00000540755 FKBP9P1Q75LS8 142 aa13.31□□□□□ -0.28
CYB561A3-216ENST00000540755 B3GNT8Q7Z7M8 397 aa13.31□□□□□ -0.28
CYB561A3-216ENST00000540755 PATL1Q86TB9 770 aaKnown RBP13.31□□□□□ -0.28
CYB561A3-216ENST00000540755 PPP1R3BQ86XI6 285 aa13.31□□□□□ -0.28
CYB561A3-216ENST00000540755 FAM86B1Q8N7N1 296 aa13.31□□□□□ -0.28
CYB561A3-216ENST00000540755 AGBL5Q8NDL9 886 aa13.31□□□□□ -0.28
CYB561A3-216ENST00000540755 OR5D16Q8NGK9 328 aa13.31□□□□□ -0.28
CYB561A3-216ENST00000540755 SLC38A5Q8WUX1 472 aa13.31□□□□□ -0.28
CYB561A3-216ENST00000540755 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.31□□□□□ -0.28
CYB561A3-216ENST00000540755 RAB8BQ92930 207 aa13.31□□□□□ -0.28
CYB561A3-216ENST00000540755 TMEM19Q96HH6 336 aa13.31□□□□□ -0.28
CYB561A3-216ENST00000540755 NAF1Q96HR8 494 aaKnown RBP13.31□□□□□ -0.28
CYB561A3-216ENST00000540755 OR7D2Q96RA2 312 aa13.31□□□□□ -0.28
CYB561A3-216ENST00000540755 ALOXE3Q9BYJ1 711 aa13.31□□□□□ -0.28
CYB561A3-216ENST00000540755 SLC7A5P2Q9GIP4 190 aa13.31□□□□□ -0.28
CYB561A3-216ENST00000540755 VCXQ9H320 206 aa13.31□□□□□ -0.28
CYB561A3-216ENST00000540755 MKKSQ9NPJ1 570 aaPredicted RBP13.31□□□□□ -0.28
CYB561A3-216ENST00000540755 C8orf4Q9NR00 106 aa13.31□□□□□ -0.28
CYB561A3-216ENST00000540755 AGPAT4Q9NRZ5 378 aa13.31□□□□□ -0.28
CYB561A3-216ENST00000540755 OCIAD1Q9NX40 245 aa13.31□□□□□ -0.28
CYB561A3-216ENST00000540755 ADPRHL2Q9NX46 363 aa13.31□□□□□ -0.28
CYB561A3-216ENST00000540755 TRPC4Q9UBN4 977 aa13.31□□□□□ -0.28
CYB561A3-216ENST00000540755 KNTC1P50748 2209 aa13.31□□□□□ -0.28
CYB561A3-216ENST00000540755 DUXAA6NLW8 204 aa13.3□□□□□ -0.28
CYB561A3-216ENST00000540755 EFCAB7A8K855 629 aa13.3□□□□□ -0.28
CYB561A3-216ENST00000540755 C5orf58C9J3I9 102 aa13.3□□□□□ -0.28
CYB561A3-216ENST00000540755 ZNF682O95780 498 aa13.3□□□□□ -0.28
CYB561A3-216ENST00000540755 AGR2O95994 175 aa13.3□□□□□ -0.28
CYB561A3-216ENST00000540755 IFNA14P01570 189 aa13.3□□□□□ -0.28
CYB561A3-216ENST00000540755 BCHEP06276 602 aa13.3□□□□□ -0.28
CYB561A3-216ENST00000540755 PEX2P28328 305 aa13.3□□□□□ -0.28
CYB561A3-216ENST00000540755 GNA13Q14344 377 aa13.3□□□□□ -0.28
CYB561A3-216ENST00000540755 MAPK11Q15759 364 aa13.3□□□□□ -0.28
CYB561A3-216ENST00000540755 TRMT12Q53H54 448 aaKnown RBP13.3□□□□□ -0.28
CYB561A3-216ENST00000540755 CYBRD1Q53TN4 286 aa13.3□□□□□ -0.28
CYB561A3-216ENST00000540755 EXOSC6Q5RKV6 272 aaKnown RBP13.3□□□□□ -0.28
CYB561A3-216ENST00000540755 PWWP2BQ6NUJ5 590 aa13.3□□□□□ -0.28
CYB561A3-216ENST00000540755 MFSD12Q6NUT3 480 aa13.3□□□□□ -0.28
CYB561A3-216ENST00000540755 CDC73Q6P1J9 531 aa13.3□□□□□ -0.28
CYB561A3-216ENST00000540755 RBM44Q6ZP01 1051 aaKnown RBP13.3□□□□□ -0.28
CYB561A3-216ENST00000540755 GALNT12Q8IXK2 581 aa13.3□□□□□ -0.28
CYB561A3-216ENST00000540755 BMPERQ8N8U9 685 aa13.3□□□□□ -0.28
CYB561A3-216ENST00000540755 C16orf58Q96GQ5 468 aa13.3□□□□□ -0.28
CYB561A3-216ENST00000540755 RBM18Q96H35 190 aaKnown RBP13.3□□□□□ -0.28
CYB561A3-216ENST00000540755 ZNF578Q96N58 590 aaPredicted RBP13.3□□□□□ -0.28
CYB561A3-216ENST00000540755 DGAT2Q96PD7 388 aa13.3□□□□□ -0.28
CYB561A3-216ENST00000540755 YIPF2Q9BWQ6 316 aa13.3□□□□□ -0.28
CYB561A3-216ENST00000540755 ANKRA2Q9H9E1 313 aa13.3□□□□□ -0.28
CYB561A3-216ENST00000540755 CXorf21Q9HAI6 301 aa13.3□□□□□ -0.28
CYB561A3-216ENST00000540755 ZNF639Q9UID6 485 aa13.3□□□□□ -0.28
CYB561A3-216ENST00000540755 LHX6Q9UPM6 363 aa13.3□□□□□ -0.28
CYB561A3-216ENST00000540755 LRCH1Q9Y2L9 728 aa13.3□□□□□ -0.28
CYB561A3-216ENST00000540755 MYOCOSA0A1B0GUC4 107 aa13.29□□□□□ -0.28
CYB561A3-216ENST00000540755 PRAMEF27A3QJZ7 478 aa13.29□□□□□ -0.28
CYB561A3-216ENST00000540755 SYNDIG1LA6NDD5 238 aa13.29□□□□□ -0.28
CYB561A3-216ENST00000540755 SUV39H1O43463 412 aa13.29□□□□□ -0.28
CYB561A3-216ENST00000540755 TPST1O60507 370 aa13.29□□□□□ -0.28
CYB561A3-216ENST00000540755 COQ9O75208 318 aa13.29□□□□□ -0.28
CYB561A3-216ENST00000540755 JRKO75564 520 aa13.29□□□□□ -0.28
CYB561A3-216ENST00000540755 PDE9AO76083 593 aa13.29□□□□□ -0.28
CYB561A3-216ENST00000540755 ONECUT2O95948 504 aa13.29□□□□□ -0.28
CYB561A3-216ENST00000540755 SEMG1P04279 462 aa13.29□□□□□ -0.28
CYB561A3-216ENST00000540755 CT62P0C5K7 136 aa13.29□□□□□ -0.28
CYB561A3-216ENST00000540755 AQP1P29972 269 aa13.29□□□□□ -0.28
CYB561A3-216ENST00000540755 MAGEA2P43356 314 aa13.29□□□□□ -0.28
CYB561A3-216ENST00000540755 HSPA13P48723 471 aa13.29□□□□□ -0.28
CYB561A3-216ENST00000540755 SELENOWP63302 87 aa13.29□□□□□ -0.28
CYB561A3-216ENST00000540755 E2F1Q01094 437 aa13.29□□□□□ -0.28
CYB561A3-216ENST00000540755 CAMK2BQ13554 666 aa13.29□□□□□ -0.28
CYB561A3-216ENST00000540755 ATP6AP1Q15904 470 aa13.29□□□□□ -0.28
CYB561A3-216ENST00000540755 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.29□□□□□ -0.28
CYB561A3-216ENST00000540755 C1orf189Q5VU69 101 aa13.29□□□□□ -0.28
CYB561A3-216ENST00000540755 PRAMEF8Q5VWM4 474 aa13.29□□□□□ -0.28
CYB561A3-216ENST00000540755 PRAMEF7Q5VXH5 474 aa13.29□□□□□ -0.28
CYB561A3-216ENST00000540755 LPCAT4Q643R3 524 aa13.29□□□□□ -0.28
CYB561A3-216ENST00000540755 GALNT10Q86SR1 603 aa13.29□□□□□ -0.28
CYB561A3-216ENST00000540755 VWA5B2Q8N398 1253 aa13.29□□□□□ -0.28
CYB561A3-216ENST00000540755 ANKFN1Q8N957 763 aa13.29□□□□□ -0.28
CYB561A3-216ENST00000540755 XAGE5Q8WWM1 108 aa13.29□□□□□ -0.28
CYB561A3-216ENST00000540755 TAMM41Q96BW9 452 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms