RNA–Protein interactions for RNA: ENST00000540638.6

EPB41L3-204, Transcript of erythrocyte membrane protein band 4.1 like 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene EPB41L3, Length 3,370 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41L3-204ENST00000540638 WDR92Q96MX6 357 aa16.09■□□□□ 0.17
EPB41L3-204ENST00000540638 TCEAL2Q9H3H9 227 aaPredicted RBP16.09■□□□□ 0.17
EPB41L3-204ENST00000540638 MAT2BQ9NZL9 334 aa16.09■□□□□ 0.17
EPB41L3-204ENST00000540638 OR2A25A4D2G3 310 aa16.09■□□□□ 0.17
EPB41L3-204ENST00000540638 SLC35F4A4IF30 521 aa16.09■□□□□ 0.17
EPB41L3-204ENST00000540638 OR2W5A6NFC9 320 aa16.09■□□□□ 0.17
EPB41L3-204ENST00000540638 GKN3PP0CG01 181 aa16.09■□□□□ 0.17
EPB41L3-204ENST00000540638 CDH3P22223 829 aa16.09■□□□□ 0.17
EPB41L3-204ENST00000540638 VSX2P58304 361 aaPredicted RBP16.09■□□□□ 0.17
EPB41L3-204ENST00000540638 CXCR4P61073 352 aa16.09■□□□□ 0.17
EPB41L3-204ENST00000540638 SYT6Q5T7P8 510 aaPredicted RBP16.09■□□□□ 0.17
EPB41L3-204ENST00000540638 FAM111BQ6SJ93 734 aa16.09■□□□□ 0.17
EPB41L3-204ENST00000540638 ASPGQ86U10 573 aa16.09■□□□□ 0.17
EPB41L3-204ENST00000540638 GPR151Q8TDV0 419 aa16.09■□□□□ 0.17
EPB41L3-204ENST00000540638 RAB11FIP5Q9BXF6 653 aa16.09■□□□□ 0.17
EPB41L3-204ENST00000540638 SYNPO2LQ9H987 977 aa16.09■□□□□ 0.17
EPB41L3-204ENST00000540638 EHD3Q9NZN3 535 aa16.09■□□□□ 0.17
EPB41L3-204ENST00000540638 PRAMEF27A3QJZ7 478 aa16.08■□□□□ 0.17
EPB41L3-204ENST00000540638 HYAL3O43820 417 aaPredicted RBP16.08■□□□□ 0.17
EPB41L3-204ENST00000540638 TLX1P31314 330 aaPredicted RBP16.08■□□□□ 0.17
EPB41L3-204ENST00000540638 SLC30A6Q6NXT4 461 aa16.08■□□□□ 0.17
EPB41L3-204ENST00000540638 HSDL2Q6YN16 418 aa16.08■□□□□ 0.17
EPB41L3-204ENST00000540638 COMTD1Q86VU5 262 aa16.08■□□□□ 0.17
EPB41L3-204ENST00000540638 CAMKK1Q8N5S9 505 aa16.08■□□□□ 0.17
EPB41L3-204ENST00000540638 SRFBP1Q8NEF9 429 aaKnown RBP16.08■□□□□ 0.17
EPB41L3-204ENST00000540638 CDS1Q92903 461 aa16.08■□□□□ 0.17
EPB41L3-204ENST00000540638 C1GALT1C1Q96EU7 318 aa16.08■□□□□ 0.17
EPB41L3-204ENST00000540638 SPATA5L1Q9BVQ7 753 aa16.08■□□□□ 0.17
EPB41L3-204ENST00000540638 IL21RQ9HBE5 538 aa16.08■□□□□ 0.17
EPB41L3-204ENST00000540638 ENOPH1Q9UHY7 261 aa16.08■□□□□ 0.17
EPB41L3-204ENST00000540638 LOC105369274A0A096LPK9 316 aa16.08■□□□□ 0.16
EPB41L3-204ENST00000540638 LOC102723532A0A0G2JNH3 316 aa16.08■□□□□ 0.16
EPB41L3-204ENST00000540638 KIAA0513O60268 411 aa16.08■□□□□ 0.16
EPB41L3-204ENST00000540638 OSMP13725 252 aa16.08■□□□□ 0.16
EPB41L3-204ENST00000540638 JUNDP17535 347 aa16.08■□□□□ 0.16
EPB41L3-204ENST00000540638 GRK5P34947 590 aa16.08■□□□□ 0.16
EPB41L3-204ENST00000540638 KCNJ5P48544 419 aa16.08■□□□□ 0.16
EPB41L3-204ENST00000540638 PCBP3P57721 371 aaKnown RBP16.08■□□□□ 0.16
EPB41L3-204ENST00000540638 SNRPNP63162 240 aaKnown RBP16.08■□□□□ 0.16
EPB41L3-204ENST00000540638 CCDC85BQ15834 202 aaPredicted RBP16.08■□□□□ 0.16
EPB41L3-204ENST00000540638 ZNF404Q494X3 552 aa16.08■□□□□ 0.16
EPB41L3-204ENST00000540638 DCDC5Q6ZRR9 648 aa16.08■□□□□ 0.16
EPB41L3-204ENST00000540638 Q6ZSR6 202 aa16.08■□□□□ 0.16
EPB41L3-204ENST00000540638 PRSS41Q7RTY9 318 aa16.08■□□□□ 0.16
EPB41L3-204ENST00000540638 LHFPL3Q86UP9 236 aa16.08■□□□□ 0.16
EPB41L3-204ENST00000540638 ALDH16A1Q8IZ83 802 aa16.08■□□□□ 0.16
EPB41L3-204ENST00000540638 OR4N4Q8N0Y3 316 aa16.08■□□□□ 0.16
EPB41L3-204ENST00000540638 CREB3L4Q8TEY5 395 aa16.08■□□□□ 0.16
EPB41L3-204ENST00000540638 OR7D2Q96RA2 312 aa16.08■□□□□ 0.16
EPB41L3-204ENST00000540638 DDX31Q9H8H2 851 aaKnown RBP16.08■□□□□ 0.16
EPB41L3-204ENST00000540638 KIAA1671Q9BY89 1806 aa16.08■□□□□ 0.16
EPB41L3-204ENST00000540638 MAN2B1O00754 1011 aa16.07■□□□□ 0.16
EPB41L3-204ENST00000540638 ADAM23O75077 832 aa16.07■□□□□ 0.16
EPB41L3-204ENST00000540638 FHP07954 510 aa16.07■□□□□ 0.16
EPB41L3-204ENST00000540638 DRD2P14416 443 aa16.07■□□□□ 0.16
EPB41L3-204ENST00000540638 C21orf58P58505 322 aa16.07■□□□□ 0.16
EPB41L3-204ENST00000540638 SHC2P98077 582 aa16.07■□□□□ 0.16
EPB41L3-204ENST00000540638 C1DQ13901 141 aaKnown RBP16.07■□□□□ 0.16
EPB41L3-204ENST00000540638 KLHL12Q53G59 568 aa16.07■□□□□ 0.16
EPB41L3-204ENST00000540638 MFSD4BQ5TF39 518 aa16.07■□□□□ 0.16
EPB41L3-204ENST00000540638 ZNF554Q86TJ5 538 aa16.07■□□□□ 0.16
EPB41L3-204ENST00000540638 GALNT12Q8IXK2 581 aa16.07■□□□□ 0.16
EPB41L3-204ENST00000540638 TRUB1Q8WWH5 349 aaKnown RBP16.07■□□□□ 0.16
EPB41L3-204ENST00000540638 TIMM29Q9BSF4 260 aa16.07■□□□□ 0.16
EPB41L3-204ENST00000540638 AICDAQ9GZX7 198 aa16.07■□□□□ 0.16
EPB41L3-204ENST00000540638 DSN1Q9H410 356 aa16.07■□□□□ 0.16
EPB41L3-204ENST00000540638 THSD1Q9NS62 852 aa16.07■□□□□ 0.16
EPB41L3-204ENST00000540638 H2AFY2Q9P0M6 372 aaPredicted RBP16.07■□□□□ 0.16
EPB41L3-204ENST00000540638 IFT52Q9Y366 437 aa16.07■□□□□ 0.16
EPB41L3-204ENST00000540638 WDR45Q9Y484 360 aa16.07■□□□□ 0.16
EPB41L3-204ENST00000540638 EFCAB10A6NFE3 127 aa16.07■□□□□ 0.16
EPB41L3-204ENST00000540638 TSPAN19P0C672 248 aa16.07■□□□□ 0.16
EPB41L3-204ENST00000540638 MYL12AP19105 171 aa16.07■□□□□ 0.16
EPB41L3-204ENST00000540638 KIR2DL1P43626 348 aaPredicted RBP16.07■□□□□ 0.16
EPB41L3-204ENST00000540638 TGM4P49221 684 aa16.07■□□□□ 0.16
EPB41L3-204ENST00000540638 EEF1A2Q05639 463 aaKnown RBP16.07■□□□□ 0.16
EPB41L3-204ENST00000540638 GPR18Q14330 331 aa16.07■□□□□ 0.16
EPB41L3-204ENST00000540638 EXOSC7Q15024 291 aaKnown RBP16.07■□□□□ 0.16
EPB41L3-204ENST00000540638 CDC73Q6P1J9 531 aa16.07■□□□□ 0.16
EPB41L3-204ENST00000540638 GPR155Q7Z3F1 870 aa16.07■□□□□ 0.16
EPB41L3-204ENST00000540638 SLC22A16Q86VW1 577 aa16.07■□□□□ 0.16
EPB41L3-204ENST00000540638 OOSP2Q86WS3 158 aa16.07■□□□□ 0.16
EPB41L3-204ENST00000540638 FAM160A2Q8N612 972 aaPredicted RBP16.07■□□□□ 0.16
EPB41L3-204ENST00000540638 OR4C15Q8NGM1 316 aa16.07■□□□□ 0.16
EPB41L3-204ENST00000540638 GRHL3Q8TE85 626 aa16.07■□□□□ 0.16
EPB41L3-204ENST00000540638 PIK3R3Q92569 461 aa16.07■□□□□ 0.16
EPB41L3-204ENST00000540638 DNAJA3Q96EY1 480 aa16.07■□□□□ 0.16
EPB41L3-204ENST00000540638 GABARAPL3Q9BY60 117 aa16.07■□□□□ 0.16
EPB41L3-204ENST00000540638 TTTY10Q9BZA0 68 aa16.07■□□□□ 0.16
EPB41L3-204ENST00000540638 WDR12Q9GZL7 423 aaKnown RBP16.07■□□□□ 0.16
EPB41L3-204ENST00000540638 PCDHGA4Q9Y5G9 962 aa16.07■□□□□ 0.16
EPB41L3-204ENST00000540638 SPIN1Q9Y657 262 aaPredicted RBP16.07■□□□□ 0.16
EPB41L3-204ENST00000540638 M0R082 166 aa16.07■□□□□ 0.16
EPB41L3-204ENST00000540638 LRRTM2O43300 516 aa16.07■□□□□ 0.16
EPB41L3-204ENST00000540638 PRKNO60260 465 aaPredicted RBP16.07■□□□□ 0.16
EPB41L3-204ENST00000540638 OR10H2O60403 315 aa16.07■□□□□ 0.16
EPB41L3-204ENST00000540638 SEMA7AO75326 666 aa16.07■□□□□ 0.16
EPB41L3-204ENST00000540638 MMP11P24347 488 aa16.07■□□□□ 0.16
EPB41L3-204ENST00000540638 SOX6P35712 828 aa16.07■□□□□ 0.16
EPB41L3-204ENST00000540638 ZNF438Q7Z4V0 828 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms