RNA–Protein interactions for RNA: ENST00000540562.1

INO80E-203, Transcript of INO80 complex subunit E, humanhuman

TSL 2

Gene INO80E, Length 3,064 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
INO80E-203ENST00000540562 PRICKLE2Q7Z3G6 844 aa13.31□□□□□ -0.28
INO80E-203ENST00000540562 KCT2Q8NC54 265 aa13.31□□□□□ -0.28
INO80E-203ENST00000540562 OR52P1PQ8NH57 321 aa13.31□□□□□ -0.28
INO80E-203ENST00000540562 NEURL3Q96EH8 262 aa13.31□□□□□ -0.28
INO80E-203ENST00000540562 CHFRQ96EP1 664 aa13.31□□□□□ -0.28
INO80E-203ENST00000540562 RNFT2Q96EX2 444 aa13.31□□□□□ -0.28
INO80E-203ENST00000540562 INSM2Q96T92 566 aaPredicted RBP13.31□□□□□ -0.28
INO80E-203ENST00000540562 NDEL1Q9GZM8 345 aa13.31□□□□□ -0.28
INO80E-203ENST00000540562 RANGRFQ9HD47 186 aaPredicted RBP13.31□□□□□ -0.28
INO80E-203ENST00000540562 TXNL4BQ9NX01 149 aaKnown RBP13.31□□□□□ -0.28
INO80E-203ENST00000540562 SEC16AO15027 2179 aa13.31□□□□□ -0.28
INO80E-203ENST00000540562 TAF4O00268 1085 aa13.31□□□□□ -0.28
INO80E-203ENST00000540562 CASKO14936 926 aa13.31□□□□□ -0.28
INO80E-203ENST00000540562 DYRK3O43781 588 aa13.31□□□□□ -0.28
INO80E-203ENST00000540562 DNAJB6O75190 326 aa13.31□□□□□ -0.28
INO80E-203ENST00000540562 EPPINO95925 133 aa13.31□□□□□ -0.28
INO80E-203ENST00000540562 EIF2S1P05198 315 aaKnown RBP13.31□□□□□ -0.28
INO80E-203ENST00000540562 CISD3P0C7P0 127 aa13.31□□□□□ -0.28
INO80E-203ENST00000540562 CSTF1Q05048 431 aaKnown RBP13.31□□□□□ -0.28
INO80E-203ENST00000540562 PDZK1Q5T2W1 519 aa13.31□□□□□ -0.28
INO80E-203ENST00000540562 SAXO2Q658L1 398 aa13.31□□□□□ -0.28
INO80E-203ENST00000540562 PDZD3Q86UT5 571 aa13.31□□□□□ -0.28
INO80E-203ENST00000540562 RASGRP3Q8IV61 690 aa13.31□□□□□ -0.28
INO80E-203ENST00000540562 NKAIN4Q8IVV8 208 aa13.31□□□□□ -0.28
INO80E-203ENST00000540562 IL17RDQ8NFM7 739 aa13.31□□□□□ -0.28
INO80E-203ENST00000540562 OR8D4Q8NGM9 314 aa13.31□□□□□ -0.28
INO80E-203ENST00000540562 ZNF486Q96H40 463 aaPredicted RBP13.31□□□□□ -0.28
INO80E-203ENST00000540562 ZNF354BQ96LW1 612 aa13.31□□□□□ -0.28
INO80E-203ENST00000540562 BCL7BQ9BQE9 202 aa13.31□□□□□ -0.28
INO80E-203ENST00000540562 HOXD1Q9GZZ0 328 aa13.31□□□□□ -0.28
INO80E-203ENST00000540562 PAQR5Q9NXK6 330 aaPredicted RBP13.31□□□□□ -0.28
INO80E-203ENST00000540562 ZNF221Q9UK13 617 aa13.31□□□□□ -0.28
INO80E-203ENST00000540562 N6AMT1Q9Y5N5 214 aa13.31□□□□□ -0.28
INO80E-203ENST00000540562 IGKV1-8A0A0C4DH67 115 aa13.3□□□□□ -0.28
INO80E-203ENST00000540562 FAM170BA6NMN3 283 aa13.3□□□□□ -0.28
INO80E-203ENST00000540562 ISM1B1AKI9 464 aa13.3□□□□□ -0.28
INO80E-203ENST00000540562 MRPL3P09001 348 aaKnown RBP13.3□□□□□ -0.28
INO80E-203ENST00000540562 PPP2R1BP30154 601 aa13.3□□□□□ -0.28
INO80E-203ENST00000540562 KCNJ5P48544 419 aa13.3□□□□□ -0.28
INO80E-203ENST00000540562 GIPRP48546 466 aa13.3□□□□□ -0.28
INO80E-203ENST00000540562 RORCP51449 518 aa13.3□□□□□ -0.28
INO80E-203ENST00000540562 CDK3Q00526 305 aa13.3□□□□□ -0.28
INO80E-203ENST00000540562 HNRNPA1L2Q32P51 320 aaKnown RBP13.3□□□□□ -0.28
INO80E-203ENST00000540562 C2orf27AQ580R0 203 aa13.3□□□□□ -0.28
INO80E-203ENST00000540562 MTFR2Q6P444 385 aa13.3□□□□□ -0.28
INO80E-203ENST00000540562 ZC3H14Q6PJT7 736 aaKnown RBP13.3□□□□□ -0.28
INO80E-203ENST00000540562 ERN2Q76MJ5 926 aaKnown RBP13.3□□□□□ -0.28
INO80E-203ENST00000540562 CCDC190Q86UF4 302 aa13.3□□□□□ -0.28
INO80E-203ENST00000540562 KIF18BQ86Y91 864 aa13.3□□□□□ -0.28
INO80E-203ENST00000540562 OR4E2Q8NGC2 313 aa13.3□□□□□ -0.28
INO80E-203ENST00000540562 OR5P2Q8WZ92 322 aa13.3□□□□□ -0.28
INO80E-203ENST00000540562 CNRIP1Q96F85 164 aaPredicted RBP13.3□□□□□ -0.28
INO80E-203ENST00000540562 CRELD1Q96HD1 420 aa13.3□□□□□ -0.28
INO80E-203ENST00000540562 SPATA9Q9BWV2 254 aa13.3□□□□□ -0.28
INO80E-203ENST00000540562 CDCA4Q9BXL8 241 aa13.3□□□□□ -0.28
INO80E-203ENST00000540562 P2RX2Q9UBL9 471 aa13.3□□□□□ -0.28
INO80E-203ENST00000540562 ZNF106Q9H2Y7 1883 aaKnown RBP13.3□□□□□ -0.28
INO80E-203ENST00000540562 MDC1Q14676 2089 aaKnown RBP13.3□□□□□ -0.28
INO80E-203ENST00000540562 CENPVL1A0A0U1RR11 272 aa13.3□□□□□ -0.28
INO80E-203ENST00000540562 ADAP00813 363 aa13.3□□□□□ -0.28
INO80E-203ENST00000540562 SCG5P05408 212 aa13.3□□□□□ -0.28
INO80E-203ENST00000540562 GKN3PP0CG01 181 aa13.3□□□□□ -0.28
INO80E-203ENST00000540562 BCL6P41182 706 aa13.3□□□□□ -0.28
INO80E-203ENST00000540562 RFX2P48378 723 aa13.3□□□□□ -0.28
INO80E-203ENST00000540562 SNRPD2P62316 118 aaKnown RBP13.3□□□□□ -0.28
INO80E-203ENST00000540562 P2RY14Q15391 338 aa13.3□□□□□ -0.28
INO80E-203ENST00000540562 TIMM50Q3ZCQ8 353 aa13.3□□□□□ -0.28
INO80E-203ENST00000540562 FAM92BQ6ZTR7 304 aa13.3□□□□□ -0.28
INO80E-203ENST00000540562 SCAIQ8N9R8 606 aa13.3□□□□□ -0.28
INO80E-203ENST00000540562 HHIPL1Q96JK4 782 aa13.3□□□□□ -0.28
INO80E-203ENST00000540562 ZNF582Q96NG8 517 aaPredicted RBP13.3□□□□□ -0.28
INO80E-203ENST00000540562 AMDHD1Q96NU7 426 aa13.3□□□□□ -0.28
INO80E-203ENST00000540562 SP140LQ9H930 580 aa13.3□□□□□ -0.28
INO80E-203ENST00000540562 DPP7Q9UHL4 492 aa13.3□□□□□ -0.28
INO80E-203ENST00000540562 A0A1W2PR48 441 aa13.29□□□□□ -0.28
INO80E-203ENST00000540562 SERTM1A2A2V5 107 aa13.29□□□□□ -0.28
INO80E-203ENST00000540562 TRHRP34981 398 aaPredicted RBP13.29□□□□□ -0.28
INO80E-203ENST00000540562 PRKCDQ05655 676 aa13.29□□□□□ -0.28
INO80E-203ENST00000540562 MLF2Q15773 248 aaPredicted RBP13.29□□□□□ -0.28
INO80E-203ENST00000540562 KLHL12Q53G59 568 aa13.29□□□□□ -0.28
INO80E-203ENST00000540562 ZNF311Q5JNZ3 666 aa13.29□□□□□ -0.28
INO80E-203ENST00000540562 FAM78AQ5JUQ0 283 aa13.29□□□□□ -0.28
INO80E-203ENST00000540562 ADGRD2Q7Z7M1 963 aa13.29□□□□□ -0.28
INO80E-203ENST00000540562 GALNT12Q8IXK2 581 aa13.29□□□□□ -0.28
INO80E-203ENST00000540562 RGMAQ96B86 450 aa13.29□□□□□ -0.28
INO80E-203ENST00000540562 RPL36Q9Y3U8 105 aaKnown RBP13.29□□□□□ -0.28
INO80E-203ENST00000540562 A0A087WUU8 490 aa13.29□□□□□ -0.28
INO80E-203ENST00000540562 MAGEB4O15481 346 aaPredicted RBP13.29□□□□□ -0.28
INO80E-203ENST00000540562 SERPINI2O75830 405 aa13.29□□□□□ -0.28
INO80E-203ENST00000540562 PTTG1O95997 202 aa13.29□□□□□ -0.28
INO80E-203ENST00000540562 PSKH1P11801 424 aa13.29□□□□□ -0.28
INO80E-203ENST00000540562 HOXB6P17509 224 aaKnown RBP13.29□□□□□ -0.28
INO80E-203ENST00000540562 AK4P27144 223 aaPredicted RBP13.29□□□□□ -0.28
INO80E-203ENST00000540562 CSNK1G2P78368 415 aa13.29□□□□□ -0.28
INO80E-203ENST00000540562 FUT5Q11128 374 aa13.29□□□□□ -0.28
INO80E-203ENST00000540562 ELAVL3Q14576 367 aaKnown RBP13.29□□□□□ -0.28
INO80E-203ENST00000540562 EIF4HQ15056 248 aaKnown RBP13.29□□□□□ -0.28
INO80E-203ENST00000540562 GPR68Q15743 365 aa13.29□□□□□ -0.28
INO80E-203ENST00000540562 CCDC92Q53HC0 331 aaPredicted RBP13.29□□□□□ -0.28
INO80E-203ENST00000540562 FAM27D1Q5T7N8 215 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms