RNA–Protein interactions for RNA: ENST00000540017.6

SNRPA1-203, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-203ENST00000540017 ZNF551Q7Z340 670 aaPredicted RBP16.84■□□□□ 0.29
SNRPA1-203ENST00000540017 CHERPQ8IWX8 916 aaKnown RBP16.84■□□□□ 0.29
SNRPA1-203ENST00000540017 POGLUT1Q8NBL1 392 aa16.84■□□□□ 0.29
SNRPA1-203ENST00000540017 PPCDCQ96CD2 204 aa16.84■□□□□ 0.29
SNRPA1-203ENST00000540017 ERP27Q96DN0 273 aa16.84■□□□□ 0.29
SNRPA1-203ENST00000540017 ZNF764Q96H86 408 aaPredicted RBP16.84■□□□□ 0.29
SNRPA1-203ENST00000540017 CNOT11Q9UKZ1 510 aaKnown RBP16.84■□□□□ 0.29
SNRPA1-203ENST00000540017 CFL2Q9Y281 166 aa16.84■□□□□ 0.29
SNRPA1-203ENST00000540017 USP9XQ93008 2570 aaPredicted RBP16.84■□□□□ 0.29
SNRPA1-203ENST00000540017 HS6ST1O60243 411 aa16.83■□□□□ 0.28
SNRPA1-203ENST00000540017 SNNO75324 88 aaPredicted RBP16.83■□□□□ 0.28
SNRPA1-203ENST00000540017 AGFG2O95081 481 aa16.83■□□□□ 0.28
SNRPA1-203ENST00000540017 P04436 131 aa16.83■□□□□ 0.28
SNRPA1-203ENST00000540017 NTSP30990 170 aa16.83■□□□□ 0.28
SNRPA1-203ENST00000540017 PPICP45877 212 aa16.83■□□□□ 0.28
SNRPA1-203ENST00000540017 PTGR1Q14914 329 aa16.83■□□□□ 0.28
SNRPA1-203ENST00000540017 CMPK2Q5EBM0 449 aa16.83■□□□□ 0.28
SNRPA1-203ENST00000540017 TMEM107Q6UX40 140 aa16.83■□□□□ 0.28
SNRPA1-203ENST00000540017 FAM47EQ6ZV65 393 aa16.83■□□□□ 0.28
SNRPA1-203ENST00000540017 FNDC5Q8NAU1 212 aa16.83■□□□□ 0.28
SNRPA1-203ENST00000540017 OR7A2PQ8NGA2 310 aa16.83■□□□□ 0.28
SNRPA1-203ENST00000540017 OR52N2Q8NGI0 321 aa16.83■□□□□ 0.28
SNRPA1-203ENST00000540017 LCORQ96JN0 433 aaPredicted RBP16.83■□□□□ 0.28
SNRPA1-203ENST00000540017 VSTM2LQ96N03 204 aa16.83■□□□□ 0.28
SNRPA1-203ENST00000540017 FAM173AQ9BQD7 235 aa16.83■□□□□ 0.28
SNRPA1-203ENST00000540017 AKTIPQ9H8T0 292 aa16.83■□□□□ 0.28
SNRPA1-203ENST00000540017 FOLH1BQ9HBA9 442 aa16.83■□□□□ 0.28
SNRPA1-203ENST00000540017 TUBA8Q9NY65 449 aaPredicted RBP16.83■□□□□ 0.28
SNRPA1-203ENST00000540017 NKIRAS1Q9NYS0 192 aa16.83■□□□□ 0.28
SNRPA1-203ENST00000540017 SH3BP4Q9P0V3 963 aa16.83■□□□□ 0.28
SNRPA1-203ENST00000540017 PRODH2Q9UF12 536 aa16.83■□□□□ 0.28
SNRPA1-203ENST00000540017 GPR55Q9Y2T6 319 aaPredicted RBP16.83■□□□□ 0.28
SNRPA1-203ENST00000540017 FAM166BA8MTA8 275 aa16.82■□□□□ 0.28
SNRPA1-203ENST00000540017 UPK1AO00322 258 aa16.82■□□□□ 0.28
SNRPA1-203ENST00000540017 PLOD2O00469 737 aa16.82■□□□□ 0.28
SNRPA1-203ENST00000540017 TFECO14948 347 aaPredicted RBP16.82■□□□□ 0.28
SNRPA1-203ENST00000540017 PDPK1O15530 556 aa16.82■□□□□ 0.28
SNRPA1-203ENST00000540017 BCAS2O75934 225 aaPredicted RBP16.82■□□□□ 0.28
SNRPA1-203ENST00000540017 GLSO94925 669 aaPredicted RBP16.82■□□□□ 0.28
SNRPA1-203ENST00000540017 SNUPNO95149 360 aaKnown RBP16.82■□□□□ 0.28
SNRPA1-203ENST00000540017 STSP08842 583 aa16.82■□□□□ 0.28
SNRPA1-203ENST00000540017 CT45A8P0DMV1 189 aa16.82■□□□□ 0.28
SNRPA1-203ENST00000540017 CT45A9P0DMV2 189 aa16.82■□□□□ 0.28
SNRPA1-203ENST00000540017 EFNA1P20827 205 aaPredicted RBP16.82■□□□□ 0.28
SNRPA1-203ENST00000540017 DRD5P21918 477 aa16.82■□□□□ 0.28
SNRPA1-203ENST00000540017 MAPK1P28482 360 aa16.82■□□□□ 0.28
SNRPA1-203ENST00000540017 FRKP42685 505 aaPredicted RBP16.82■□□□□ 0.28
SNRPA1-203ENST00000540017 ASMTP46597 345 aa16.82■□□□□ 0.28
SNRPA1-203ENST00000540017 NRG3P56975 720 aa16.82■□□□□ 0.28
SNRPA1-203ENST00000540017 CORO7P57737 925 aa16.82■□□□□ 0.28
SNRPA1-203ENST00000540017 PPIAP62937 165 aaKnown RBP16.82■□□□□ 0.28
SNRPA1-203ENST00000540017 KRTCAP3Q53RY4 240 aa16.82■□□□□ 0.28
SNRPA1-203ENST00000540017 CT45A2Q5DJT8 189 aa16.82■□□□□ 0.28
SNRPA1-203ENST00000540017 BICRALQ6AI39 1079 aa16.82■□□□□ 0.28
SNRPA1-203ENST00000540017 NPSR1Q6W5P4 371 aa16.82■□□□□ 0.28
SNRPA1-203ENST00000540017 FGD2Q7Z6J4 655 aa16.82■□□□□ 0.28
SNRPA1-203ENST00000540017 DND1Q8IYX4 353 aaKnown RBP16.82■□□□□ 0.28
SNRPA1-203ENST00000540017 FBXW8Q8N3Y1 598 aa16.82■□□□□ 0.28
SNRPA1-203ENST00000540017 KRTCAP2Q8N6L1 136 aa16.82■□□□□ 0.28
SNRPA1-203ENST00000540017 ELP4Q96EB1 424 aa16.82■□□□□ 0.28
SNRPA1-203ENST00000540017 MAGED4Q96JG8 741 aa16.82■□□□□ 0.28
SNRPA1-203ENST00000540017 ATP6V1G3Q96LB4 118 aa16.82■□□□□ 0.28
SNRPA1-203ENST00000540017 BTBD9Q96Q07 612 aa16.82■□□□□ 0.28
SNRPA1-203ENST00000540017 SH3GL2Q99962 352 aa16.82■□□□□ 0.28
SNRPA1-203ENST00000540017 TTTY12Q9BZ98 90 aa16.82■□□□□ 0.28
SNRPA1-203ENST00000540017 NUF2Q9BZD4 464 aa16.82■□□□□ 0.28
SNRPA1-203ENST00000540017 ATP6V1HQ9UI12 483 aa16.82■□□□□ 0.28
SNRPA1-203ENST00000540017 C19orf53Q9UNZ5 99 aaPredicted RBP16.82■□□□□ 0.28
SNRPA1-203ENST00000540017 EXPH5Q8NEV8 1989 aa16.82■□□□□ 0.28
SNRPA1-203ENST00000540017 A0A087WV62 115 aa16.81■□□□□ 0.28
SNRPA1-203ENST00000540017 FRG2CA6NGY1 282 aa16.81■□□□□ 0.28
SNRPA1-203ENST00000540017 SCAMP2O15127 329 aaKnown RBP16.81■□□□□ 0.28
SNRPA1-203ENST00000540017 LRRTM2O43300 516 aa16.81■□□□□ 0.28
SNRPA1-203ENST00000540017 PSMG1O95456 288 aa16.81■□□□□ 0.28
SNRPA1-203ENST00000540017 ABCB1P08183 1280 aaPredicted RBP16.81■□□□□ 0.28
SNRPA1-203ENST00000540017 PLGLB1Q02325 96 aa16.81■□□□□ 0.28
SNRPA1-203ENST00000540017 EMX2Q04743 252 aa16.81■□□□□ 0.28
SNRPA1-203ENST00000540017 HSPB3Q12988 150 aa16.81■□□□□ 0.28
SNRPA1-203ENST00000540017 RPS6KA2Q15349 733 aa16.81■□□□□ 0.28
SNRPA1-203ENST00000540017 C1QL3Q5VWW1 255 aa16.81■□□□□ 0.28
SNRPA1-203ENST00000540017 GK5Q6ZS86 529 aa16.81■□□□□ 0.28
SNRPA1-203ENST00000540017 HDXQ7Z353 690 aa16.81■□□□□ 0.28
SNRPA1-203ENST00000540017 OR2L13Q8N349 312 aa16.81■□□□□ 0.28
SNRPA1-203ENST00000540017 SPPL2AQ8TCT8 520 aa16.81■□□□□ 0.28
SNRPA1-203ENST00000540017 OMA1Q96E52 524 aa16.81■□□□□ 0.28
SNRPA1-203ENST00000540017 HSPBAP1Q96EW2 488 aa16.81■□□□□ 0.28
SNRPA1-203ENST00000540017 DEFB127Q9H1M4 99 aa16.81■□□□□ 0.28
SNRPA1-203ENST00000540017 RYDENQ9NUL5 291 aaKnown RBP16.81■□□□□ 0.28
SNRPA1-203ENST00000540017 ARGLU1Q9NWB6 273 aaPredicted RBP16.81■□□□□ 0.28
SNRPA1-203ENST00000540017 CNIH4Q9P003 139 aa16.81■□□□□ 0.28
SNRPA1-203ENST00000540017 SLC5A6Q9Y289 635 aa16.81■□□□□ 0.28
SNRPA1-203ENST00000540017 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.81■□□□□ 0.28
SNRPA1-203ENST00000540017 TO15178 435 aa16.8■□□□□ 0.28
SNRPA1-203ENST00000540017 ACOX3O15254 700 aa16.8■□□□□ 0.28
SNRPA1-203ENST00000540017 ERN1O75460 977 aaKnown RBP16.8■□□□□ 0.28
SNRPA1-203ENST00000540017 PPM1BO75688 479 aa16.8■□□□□ 0.28
SNRPA1-203ENST00000540017 SASH3O75995 380 aa16.8■□□□□ 0.28
SNRPA1-203ENST00000540017 LAMP1P11279 417 aa16.8■□□□□ 0.28
SNRPA1-203ENST00000540017 G6PDP11413 515 aa16.8■□□□□ 0.28
SNRPA1-203ENST00000540017 PRPS2P11908 318 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms