RNA–Protein interactions for RNA: ENST00000539982.5

CLSTN3-209, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-209ENST00000539982 MRM1Q6IN84 353 aaKnown RBP10.52□□□□□ -0.73
CLSTN3-209ENST00000539982 VWA1Q6PCB0 445 aa10.52□□□□□ -0.73
CLSTN3-209ENST00000539982 C22orf34Q6ZV56 151 aa10.52□□□□□ -0.73
CLSTN3-209ENST00000539982 SH2D5Q6ZV89 423 aa10.52□□□□□ -0.73
CLSTN3-209ENST00000539982 CHMP1BQ7LBR1 199 aa10.52□□□□□ -0.73
CLSTN3-209ENST00000539982 LRRC70Q7Z2Q7 622 aa10.52□□□□□ -0.73
CLSTN3-209ENST00000539982 ZNF550Q7Z398 422 aa10.52□□□□□ -0.73
CLSTN3-209ENST00000539982 P4HA3Q7Z4N8 544 aa10.52□□□□□ -0.73
CLSTN3-209ENST00000539982 GALNT12Q8IXK2 581 aa10.52□□□□□ -0.73
CLSTN3-209ENST00000539982 PDIK1LQ8N165 341 aa10.52□□□□□ -0.73
CLSTN3-209ENST00000539982 RNF175Q8N4F7 328 aa10.52□□□□□ -0.73
CLSTN3-209ENST00000539982 PDPRQ8NCN5 879 aa10.52□□□□□ -0.73
CLSTN3-209ENST00000539982 OR7G1Q8NGA0 311 aa10.52□□□□□ -0.73
CLSTN3-209ENST00000539982 HUS1BQ8NHY5 278 aa10.52□□□□□ -0.73
CLSTN3-209ENST00000539982 NAP1L3Q99457 506 aaPredicted RBP10.52□□□□□ -0.73
CLSTN3-209ENST00000539982 OSBPL11Q9BXB4 747 aa10.52□□□□□ -0.73
CLSTN3-209ENST00000539982 NXF5Q9H1B4 397 aaKnown RBP10.52□□□□□ -0.73
CLSTN3-209ENST00000539982 OPN3Q9H1Y3 402 aaPredicted RBP10.52□□□□□ -0.73
CLSTN3-209ENST00000539982 DDX31Q9H8H2 851 aaKnown RBP10.52□□□□□ -0.73
CLSTN3-209ENST00000539982 GALNT9Q9HCQ5 603 aa10.52□□□□□ -0.73
CLSTN3-209ENST00000539982 CHMP2BQ9UQN3 213 aa10.52□□□□□ -0.73
CLSTN3-209ENST00000539982 MRPS18CQ9Y3D5 142 aaKnown RBP10.52□□□□□ -0.73
CLSTN3-209ENST00000539982 ROS1P08922 2347 aa10.52□□□□□ -0.73
CLSTN3-209ENST00000539982 A0A0A6YYD5 115 aa10.51□□□□□ -0.73
CLSTN3-209ENST00000539982 A0A1W2PS29 197 aa10.51□□□□□ -0.73
CLSTN3-209ENST00000539982 PGRMC2O15173 223 aa10.51□□□□□ -0.73
CLSTN3-209ENST00000539982 KLF4O43474 513 aa10.51□□□□□ -0.73
CLSTN3-209ENST00000539982 TLX2O43763 284 aaPredicted RBP10.51□□□□□ -0.73
CLSTN3-209ENST00000539982 TMPRSS11DO60235 418 aa10.51□□□□□ -0.73
CLSTN3-209ENST00000539982 EEDO75530 441 aaKnown RBP10.51□□□□□ -0.73
CLSTN3-209ENST00000539982 WISP3O95389 354 aaPredicted RBP10.51□□□□□ -0.73
CLSTN3-209ENST00000539982 AIFM1O95831 613 aa10.51□□□□□ -0.73
CLSTN3-209ENST00000539982 F12P00748 615 aaPredicted RBP10.51□□□□□ -0.73
CLSTN3-209ENST00000539982 CGAP01215 116 aa10.51□□□□□ -0.73
CLSTN3-209ENST00000539982 S100BP04271 92 aaPredicted RBP10.51□□□□□ -0.73
CLSTN3-209ENST00000539982 TP53P04637 393 aaPredicted RBP10.51□□□□□ -0.73
CLSTN3-209ENST00000539982 CCDC166P0CW27 439 aa10.51□□□□□ -0.73
CLSTN3-209ENST00000539982 NR2F6P10588 404 aa10.51□□□□□ -0.73
CLSTN3-209ENST00000539982 CD1DP15813 335 aa10.51□□□□□ -0.73
CLSTN3-209ENST00000539982 GPX3P22352 226 aa10.51□□□□□ -0.73
CLSTN3-209ENST00000539982 PIK3R1P27986 724 aa10.51□□□□□ -0.73
CLSTN3-209ENST00000539982 SRD5A2P31213 254 aa10.51□□□□□ -0.73
CLSTN3-209ENST00000539982 CCKARP32238 428 aa10.51□□□□□ -0.73
CLSTN3-209ENST00000539982 KIR2DL2P43627 348 aaPredicted RBP10.51□□□□□ -0.73
CLSTN3-209ENST00000539982 KCNJ5P48544 419 aa10.51□□□□□ -0.73
CLSTN3-209ENST00000539982 FNTAP49354 379 aa10.51□□□□□ -0.73
CLSTN3-209ENST00000539982 ATP6V0D1P61421 351 aa10.51□□□□□ -0.73
CLSTN3-209ENST00000539982 POU4F1Q01851 419 aa10.51□□□□□ -0.73
CLSTN3-209ENST00000539982 DDX39BQ13838 428 aaKnown RBP10.51□□□□□ -0.73
CLSTN3-209ENST00000539982 OR4D1Q15615 310 aa10.51□□□□□ -0.73
CLSTN3-209ENST00000539982 CLEC12BQ2HXU8 276 aa10.51□□□□□ -0.73
CLSTN3-209ENST00000539982 DESI1Q6ICB0 168 aa10.51□□□□□ -0.73
CLSTN3-209ENST00000539982 CYP20A1Q6UW02 462 aa10.51□□□□□ -0.73
CLSTN3-209ENST00000539982 MAPK1IP1LQ8NDC0 245 aa10.51□□□□□ -0.73
CLSTN3-209ENST00000539982 CAVIN3Q969G5 261 aa10.51□□□□□ -0.73
CLSTN3-209ENST00000539982 LRRC39Q96DD0 335 aa10.51□□□□□ -0.73
CLSTN3-209ENST00000539982 PBKQ96KB5 322 aa10.51□□□□□ -0.73
CLSTN3-209ENST00000539982 MCMBPQ9BTE3 642 aa10.51□□□□□ -0.73
CLSTN3-209ENST00000539982 ZNF717Q9BY31 904 aaPredicted RBP10.51□□□□□ -0.73
CLSTN3-209ENST00000539982 REG4Q9BYZ8 158 aa10.51□□□□□ -0.73
CLSTN3-209ENST00000539982 RHOJQ9H4E5 214 aa10.51□□□□□ -0.73
CLSTN3-209ENST00000539982 KLRF1Q9NZS2 232 aa10.51□□□□□ -0.73
CLSTN3-209ENST00000539982 TSC22D4Q9Y3Q8 395 aa10.51□□□□□ -0.73
CLSTN3-209ENST00000539982 TEX264Q9Y6I9 313 aa10.51□□□□□ -0.73
CLSTN3-209ENST00000539982 EXPH5Q8NEV8 1989 aa10.51□□□□□ -0.73
CLSTN3-209ENST00000539982 CUBNO60494 3623 aa10.51□□□□□ -0.73
CLSTN3-209ENST00000539982 A0A087X1B8 175 aa10.5□□□□□ -0.73
CLSTN3-209ENST00000539982 FRG2CA6NGY1 282 aa10.5□□□□□ -0.73
CLSTN3-209ENST00000539982 SLC22A20A6NK97 555 aa10.5□□□□□ -0.73
CLSTN3-209ENST00000539982 EMC8O43402 210 aa10.5□□□□□ -0.73
CLSTN3-209ENST00000539982 CD8BP10966 210 aa10.5□□□□□ -0.73
CLSTN3-209ENST00000539982 S1PR1P21453 382 aa10.5□□□□□ -0.73
CLSTN3-209ENST00000539982 TBXA2RP21731 343 aa10.5□□□□□ -0.73
CLSTN3-209ENST00000539982 BSGP35613 385 aa10.5□□□□□ -0.73
CLSTN3-209ENST00000539982 XKP51811 444 aa10.5□□□□□ -0.73
CLSTN3-209ENST00000539982 GNG11P61952 73 aa10.5□□□□□ -0.73
CLSTN3-209ENST00000539982 ETF1P62495 437 aaKnown RBP10.5□□□□□ -0.73
CLSTN3-209ENST00000539982 ILF2Q12905 390 aaKnown RBP10.5□□□□□ -0.73
CLSTN3-209ENST00000539982 BEX5Q5H9J7 111 aa10.5□□□□□ -0.73
CLSTN3-209ENST00000539982 ANKRD34AQ69YU3 496 aa10.5□□□□□ -0.73
CLSTN3-209ENST00000539982 OR52E8Q6IFG1 317 aa10.5□□□□□ -0.73
CLSTN3-209ENST00000539982 GRHL2Q6ISB3 625 aa10.5□□□□□ -0.73
CLSTN3-209ENST00000539982 ZNF704Q6ZNC4 412 aaPredicted RBP10.5□□□□□ -0.73
CLSTN3-209ENST00000539982 MILR1Q7Z6M3 343 aa10.5□□□□□ -0.73
CLSTN3-209ENST00000539982 PLCZ1Q86YW0 608 aa10.5□□□□□ -0.73
CLSTN3-209ENST00000539982 ZNF611Q8N823 705 aa10.5□□□□□ -0.73
CLSTN3-209ENST00000539982 ZNF610Q8N9Z0 462 aa10.5□□□□□ -0.73
CLSTN3-209ENST00000539982 OR4K14Q8NGD5 310 aa10.5□□□□□ -0.73
CLSTN3-209ENST00000539982 OMA1Q96E52 524 aa10.5□□□□□ -0.73
CLSTN3-209ENST00000539982 DTNBP1Q96EV8 351 aa10.5□□□□□ -0.73
CLSTN3-209ENST00000539982 ZNF845Q96IR2 970 aaPredicted RBP10.5□□□□□ -0.73
CLSTN3-209ENST00000539982 LCORQ96JN0 433 aaPredicted RBP10.5□□□□□ -0.73
CLSTN3-209ENST00000539982 SFXN2Q96NB2 322 aa10.5□□□□□ -0.73
CLSTN3-209ENST00000539982 MTERF1Q99551 399 aaKnown RBP10.5□□□□□ -0.73
CLSTN3-209ENST00000539982 YAE1D1Q9NRH1 226 aa10.5□□□□□ -0.73
CLSTN3-209ENST00000539982 MOCS1Q9NZB8 636 aa10.5□□□□□ -0.73
CLSTN3-209ENST00000539982 HEY2Q9UBP5 337 aa10.5□□□□□ -0.73
CLSTN3-209ENST00000539982 ASIC3Q9UHC3 531 aa10.5□□□□□ -0.73
CLSTN3-209ENST00000539982 CFL2Q9Y281 166 aa10.5□□□□□ -0.73
CLSTN3-209ENST00000539982 DTX4Q9Y2E6 619 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms