RNA–Protein interactions for RNA: ENST00000538970.5

VAMP1-206, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best)

Gene VAMP1, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-206ENST00000538970 CBLCQ9ULV8 474 aa11.42□□□□□ -0.58
VAMP1-206ENST00000538970 CFL2Q9Y281 166 aa11.42□□□□□ -0.58
VAMP1-206ENST00000538970 ARHGAP21Q5T5U3 1957 aa11.41□□□□□ -0.58
VAMP1-206ENST00000538970 EXPH5Q8NEV8 1989 aa11.41□□□□□ -0.58
VAMP1-206ENST00000538970 A8MT66 165 aa11.41□□□□□ -0.58
VAMP1-206ENST00000538970 PPP6CO00743 305 aa11.41□□□□□ -0.58
VAMP1-206ENST00000538970 SNPHO15079 494 aa11.41□□□□□ -0.58
VAMP1-206ENST00000538970 ACOX3O15254 700 aa11.41□□□□□ -0.58
VAMP1-206ENST00000538970 ERAL1O75616 437 aaKnown RBP11.41□□□□□ -0.58
VAMP1-206ENST00000538970 CBX7O95931 251 aa11.41□□□□□ -0.58
VAMP1-206ENST00000538970 OTCP00480 354 aa11.41□□□□□ -0.58
VAMP1-206ENST00000538970 PDYNP01213 254 aa11.41□□□□□ -0.58
VAMP1-206ENST00000538970 SBK3P0C264 359 aa11.41□□□□□ -0.58
VAMP1-206ENST00000538970 RHOXF2BP0C7M4 288 aa11.41□□□□□ -0.58
VAMP1-206ENST00000538970 CSNK2A2P19784 350 aaPredicted RBP11.41□□□□□ -0.58
VAMP1-206ENST00000538970 TACR1P25103 407 aa11.41□□□□□ -0.58
VAMP1-206ENST00000538970 DEKP35659 375 aaKnown RBP11.41□□□□□ -0.58
VAMP1-206ENST00000538970 FEN1P39748 380 aaKnown RBP11.41□□□□□ -0.58
VAMP1-206ENST00000538970 PTGDSP41222 190 aa11.41□□□□□ -0.58
VAMP1-206ENST00000538970 SERPINB9P50453 376 aa11.41□□□□□ -0.58
VAMP1-206ENST00000538970 NAGLUP54802 743 aa11.41□□□□□ -0.58
VAMP1-206ENST00000538970 DUSP2Q05923 314 aa11.41□□□□□ -0.58
VAMP1-206ENST00000538970 PLCXD2Q0VAA5 305 aa11.41□□□□□ -0.58
VAMP1-206ENST00000538970 TOMM20Q15388 145 aa11.41□□□□□ -0.58
VAMP1-206ENST00000538970 SLC30A6Q6NXT4 461 aa11.41□□□□□ -0.58
VAMP1-206ENST00000538970 ANGPTL8Q6UXH0 198 aa11.41□□□□□ -0.58
VAMP1-206ENST00000538970 NUP54Q7Z3B4 507 aa11.41□□□□□ -0.58
VAMP1-206ENST00000538970 CDC20BQ86Y33 519 aa11.41□□□□□ -0.58
VAMP1-206ENST00000538970 FAM83FQ8NEG4 500 aaPredicted RBP11.41□□□□□ -0.58
VAMP1-206ENST00000538970 OR1J4Q8NGS1 313 aa11.41□□□□□ -0.58
VAMP1-206ENST00000538970 SELENOMQ8WWX9 145 aa11.41□□□□□ -0.58
VAMP1-206ENST00000538970 ABTB1Q969K4 478 aaPredicted RBP11.41□□□□□ -0.58
VAMP1-206ENST00000538970 TM4SF18Q96CE8 201 aa11.41□□□□□ -0.58
VAMP1-206ENST00000538970 CTHRC1Q96CG8 243 aa11.41□□□□□ -0.58
VAMP1-206ENST00000538970 KLHL29Q96CT2 875 aa11.41□□□□□ -0.58
VAMP1-206ENST00000538970 OMA1Q96E52 524 aa11.41□□□□□ -0.58
VAMP1-206ENST00000538970 LCORQ96JN0 433 aaPredicted RBP11.41□□□□□ -0.58
VAMP1-206ENST00000538970 TRIB1Q96RU8 372 aa11.41□□□□□ -0.58
VAMP1-206ENST00000538970 NODALQ96S42 347 aa11.41□□□□□ -0.58
VAMP1-206ENST00000538970 MDFIQ99750 246 aa11.41□□□□□ -0.58
VAMP1-206ENST00000538970 MRPL57Q9BQC6 102 aaKnown RBP11.41□□□□□ -0.58
VAMP1-206ENST00000538970 OSBPL11Q9BXB4 747 aa11.41□□□□□ -0.58
VAMP1-206ENST00000538970 C1QTNF3Q9BXJ4 246 aa11.41□□□□□ -0.58
VAMP1-206ENST00000538970 MRPL46Q9H2W6 279 aaKnown RBP11.41□□□□□ -0.58
VAMP1-206ENST00000538970 BRF2Q9HAW0 419 aa11.41□□□□□ -0.58
VAMP1-206ENST00000538970 GALNT9Q9HCQ5 603 aa11.41□□□□□ -0.58
VAMP1-206ENST00000538970 FETUBQ9UGM5 382 aa11.41□□□□□ -0.58
VAMP1-206ENST00000538970 TRPS1Q9UHF7 1281 aa11.41□□□□□ -0.58
VAMP1-206ENST00000538970 BCAP29Q9UHQ4 241 aa11.41□□□□□ -0.58
VAMP1-206ENST00000538970 ZNF225Q9UK10 706 aa11.41□□□□□ -0.58
VAMP1-206ENST00000538970 SNX6Q9UNH7 406 aa11.41□□□□□ -0.58
VAMP1-206ENST00000538970 PLLPQ9Y342 182 aa11.41□□□□□ -0.58
VAMP1-206ENST00000538970 UGT2B11O75310 529 aa11.4□□□□□ -0.58
VAMP1-206ENST00000538970 ACTL6AO96019 429 aa11.4□□□□□ -0.58
VAMP1-206ENST00000538970 TSPAN8P19075 237 aa11.4□□□□□ -0.58
VAMP1-206ENST00000538970 CTSSP25774 331 aa11.4□□□□□ -0.58
VAMP1-206ENST00000538970 CNTFP26441 200 aa11.4□□□□□ -0.58
VAMP1-206ENST00000538970 CDH13P55290 713 aa11.4□□□□□ -0.58
VAMP1-206ENST00000538970 SNTA1Q13424 505 aa11.4□□□□□ -0.58
VAMP1-206ENST00000538970 DAZAP2Q15038 168 aaPredicted RBP11.4□□□□□ -0.58
VAMP1-206ENST00000538970 LTB4RQ15722 352 aa11.4□□□□□ -0.58
VAMP1-206ENST00000538970 TRMT12Q53H54 448 aaKnown RBP11.4□□□□□ -0.58
VAMP1-206ENST00000538970 FAM180BQ6P0A1 224 aa11.4□□□□□ -0.58
VAMP1-206ENST00000538970 YRDCQ86U90 279 aaKnown RBP11.4□□□□□ -0.58
VAMP1-206ENST00000538970 TGIF2LYQ8IUE0 185 aa11.4□□□□□ -0.58
VAMP1-206ENST00000538970 TMEM151AQ8N4L1 468 aa11.4□□□□□ -0.58
VAMP1-206ENST00000538970 C1orf52Q8N6N3 182 aaKnown RBP11.4□□□□□ -0.58
VAMP1-206ENST00000538970 C9orf106Q8NAJ2 232 aa11.4□□□□□ -0.58
VAMP1-206ENST00000538970 CHDHQ8NE62 594 aaPredicted RBP11.4□□□□□ -0.58
VAMP1-206ENST00000538970 ADCY4Q8NFM4 1077 aa11.4□□□□□ -0.58
VAMP1-206ENST00000538970 OR52R1Q8NGF1 315 aa11.4□□□□□ -0.58
VAMP1-206ENST00000538970 DCAKDQ8WVC6 231 aa11.4□□□□□ -0.58
VAMP1-206ENST00000538970 CNRIP1Q96F85 164 aaPredicted RBP11.4□□□□□ -0.58
VAMP1-206ENST00000538970 ZNF681Q96N22 645 aa11.4□□□□□ -0.58
VAMP1-206ENST00000538970 HBEGFQ99075 208 aa11.4□□□□□ -0.58
VAMP1-206ENST00000538970 FAIM2Q9BWQ8 316 aa11.4□□□□□ -0.58
VAMP1-206ENST00000538970 CALHM2Q9HA72 323 aa11.4□□□□□ -0.58
VAMP1-206ENST00000538970 EHD3Q9NZN3 535 aa11.4□□□□□ -0.58
VAMP1-206ENST00000538970 KLRF1Q9NZS2 232 aa11.4□□□□□ -0.58
VAMP1-206ENST00000538970 JKAMPQ9P055 326 aa11.4□□□□□ -0.58
VAMP1-206ENST00000538970 ZNF180Q9UJW8 692 aa11.4□□□□□ -0.58
VAMP1-206ENST00000538970 MAPRE3Q9UPY8 281 aa11.4□□□□□ -0.58
VAMP1-206ENST00000538970 PLEKHA6Q9Y2H5 1048 aa11.4□□□□□ -0.58
VAMP1-206ENST00000538970 C2orf72A6NCS6 295 aa11.39□□□□□ -0.59
VAMP1-206ENST00000538970 PRAMEF25A6NGN4 478 aa11.39□□□□□ -0.59
VAMP1-206ENST00000538970 FRG2CA6NGY1 282 aa11.39□□□□□ -0.59
VAMP1-206ENST00000538970 TRIM49D1C9J1S8 452 aa11.39□□□□□ -0.59
VAMP1-206ENST00000538970 EEF1E1-BLOC1S5C9J1V9 151 aa11.39□□□□□ -0.59
VAMP1-206ENST00000538970 TO15178 435 aa11.39□□□□□ -0.59
VAMP1-206ENST00000538970 EEF1E1O43324 174 aaKnown RBP11.39□□□□□ -0.59
VAMP1-206ENST00000538970 ICOSLGO75144 302 aa11.39□□□□□ -0.59
VAMP1-206ENST00000538970 OR4F21O95013 312 aa11.39□□□□□ -0.59
VAMP1-206ENST00000538970 PCSK2P16519 638 aa11.39□□□□□ -0.59
VAMP1-206ENST00000538970 KLK2P20151 261 aa11.39□□□□□ -0.59
VAMP1-206ENST00000538970 DRD5P21918 477 aa11.39□□□□□ -0.59
VAMP1-206ENST00000538970 ECHS1P30084 290 aa11.39□□□□□ -0.59
VAMP1-206ENST00000538970 OPRM1P35372 400 aa11.39□□□□□ -0.59
VAMP1-206ENST00000538970 PPICP45877 212 aa11.39□□□□□ -0.59
VAMP1-206ENST00000538970 ALDH9A1P49189 494 aa11.39□□□□□ -0.59
VAMP1-206ENST00000538970 EMDP50402 254 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms