RNA–Protein interactions for RNA: ENST00000538573.1

LINC02408-202, Transcript of long intergenic non-protein coding RNA 2408, humanhuman

TSL 4 BASIC

Gene LINC02408, Length 559 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02408-202ENST00000538573 MTRF1O75570 445 aaKnown RBP4.85□□□□□ -1.63
LINC02408-202ENST00000538573 PDE5AO76074 875 aa4.85□□□□□ -1.63
LINC02408-202ENST00000538573 HEXBP07686 556 aa4.85□□□□□ -1.63
LINC02408-202ENST00000538573 ZGLP1P0C6A0 271 aa4.85□□□□□ -1.63
LINC02408-202ENST00000538573 ZCCHC18P0CG32 403 aa4.85□□□□□ -1.63
LINC02408-202ENST00000538573 SLC35E2P0CK97 266 aa4.85□□□□□ -1.63
LINC02408-202ENST00000538573 TCN1P20061 433 aaPredicted RBP4.85□□□□□ -1.63
LINC02408-202ENST00000538573 SDHBP21912 280 aa4.85□□□□□ -1.63
LINC02408-202ENST00000538573 UQCRC2P22695 453 aa4.85□□□□□ -1.63
LINC02408-202ENST00000538573 SLC6A2P23975 617 aa4.85□□□□□ -1.63
LINC02408-202ENST00000538573 RBMS1P29558 406 aaKnown RBP4.85□□□□□ -1.63
LINC02408-202ENST00000538573 RORAP35398 523 aa4.85□□□□□ -1.63
LINC02408-202ENST00000538573 CHI3L1P36222 383 aaPredicted RBP4.85□□□□□ -1.63
LINC02408-202ENST00000538573 FRKP42685 505 aaPredicted RBP4.85□□□□□ -1.63
LINC02408-202ENST00000538573 CCT3P49368 545 aaKnown RBP4.85□□□□□ -1.63
LINC02408-202ENST00000538573 CDK9P50750 372 aaKnown RBP4.85□□□□□ -1.63
LINC02408-202ENST00000538573 SLC7A2P52569 658 aa4.85□□□□□ -1.63
LINC02408-202ENST00000538573 PRKAG1P54619 331 aa4.85□□□□□ -1.63
LINC02408-202ENST00000538573 MTPNP58546 118 aa4.85□□□□□ -1.63
LINC02408-202ENST00000538573 KCNJ2P63252 427 aa4.85□□□□□ -1.63
LINC02408-202ENST00000538573 GABREP78334 506 aa4.85□□□□□ -1.63
LINC02408-202ENST00000538573 COX10Q12887 443 aa4.85□□□□□ -1.63
LINC02408-202ENST00000538573 MLC1Q15049 377 aa4.85□□□□□ -1.63
LINC02408-202ENST00000538573 LTB4RQ15722 352 aa4.85□□□□□ -1.63
LINC02408-202ENST00000538573 NSDHLQ15738 373 aa4.85□□□□□ -1.63
LINC02408-202ENST00000538573 TBC1D25Q3MII6 688 aa4.85□□□□□ -1.63
LINC02408-202ENST00000538573 RUNDC3AQ59EK9 446 aa4.85□□□□□ -1.63
LINC02408-202ENST00000538573 RABL3Q5HYI8 236 aa4.85□□□□□ -1.63
LINC02408-202ENST00000538573 LRIF1Q5T3J3 769 aa4.85□□□□□ -1.63
LINC02408-202ENST00000538573 C6orf163Q5TEZ5 329 aa4.85□□□□□ -1.63
LINC02408-202ENST00000538573 FAAH2Q6GMR7 532 aa4.85□□□□□ -1.63
LINC02408-202ENST00000538573 CDPF1Q6NVV7 123 aa4.85□□□□□ -1.63
LINC02408-202ENST00000538573 TMEM107Q6UX40 140 aa4.85□□□□□ -1.63
LINC02408-202ENST00000538573 ANGPTL8Q6UXH0 198 aa4.85□□□□□ -1.63
LINC02408-202ENST00000538573 CCBE1Q6UXH8 406 aaPredicted RBP4.85□□□□□ -1.63
LINC02408-202ENST00000538573 BNC2Q6ZN30 1099 aaPredicted RBP4.85□□□□□ -1.63
LINC02408-202ENST00000538573 COX15Q7KZN9 410 aa4.85□□□□□ -1.63
LINC02408-202ENST00000538573 SZRD1Q7Z422 152 aa4.85□□□□□ -1.63
LINC02408-202ENST00000538573 ARPINQ7Z6K5 226 aa4.85□□□□□ -1.63
LINC02408-202ENST00000538573 IFNEQ86WN2 208 aa4.85□□□□□ -1.63
LINC02408-202ENST00000538573 ZC3H7AQ8IWR0 971 aaKnown RBP4.85□□□□□ -1.63
LINC02408-202ENST00000538573 SCUBE1Q8IWY4 988 aa4.85□□□□□ -1.63
LINC02408-202ENST00000538573 MSRB3Q8IXL7 192 aa4.85□□□□□ -1.63
LINC02408-202ENST00000538573 SLC15A3Q8IY34 581 aa4.85□□□□□ -1.63
LINC02408-202ENST00000538573 ARHGAP24Q8N264 748 aa4.85□□□□□ -1.63
LINC02408-202ENST00000538573 GALNT15Q8N3T1 639 aa4.85□□□□□ -1.63
LINC02408-202ENST00000538573 TRIML2Q8N7C3 387 aa4.85□□□□□ -1.63
LINC02408-202ENST00000538573 RNF148Q8N7C7 305 aa4.85□□□□□ -1.63
LINC02408-202ENST00000538573 OR9A2Q8NGT5 310 aa4.85□□□□□ -1.63
LINC02408-202ENST00000538573 OR5AK3PQ8NH89 298 aa4.85□□□□□ -1.63
LINC02408-202ENST00000538573 GOT1L1Q8NHS2 421 aaPredicted RBP4.85□□□□□ -1.63
LINC02408-202ENST00000538573 SUN3Q8TAQ9 357 aa4.85□□□□□ -1.63
LINC02408-202ENST00000538573 STT3BQ8TCJ2 826 aa4.85□□□□□ -1.63
LINC02408-202ENST00000538573 PNPT1Q8TCS8 783 aaKnown RBP4.85□□□□□ -1.63
LINC02408-202ENST00000538573 ADAMTS14Q8WXS8 1223 aa4.85□□□□□ -1.63
LINC02408-202ENST00000538573 KAT2AQ92830 837 aa4.85□□□□□ -1.63
LINC02408-202ENST00000538573 TMEM125Q96AQ2 219 aa4.85□□□□□ -1.63
LINC02408-202ENST00000538573 AURKBQ96GD4 344 aaPredicted RBP4.85□□□□□ -1.63
LINC02408-202ENST00000538573 RSRC1Q96IZ7 334 aaKnown RBP4.85□□□□□ -1.63
LINC02408-202ENST00000538573 CLPTM1LQ96KA5 538 aa4.85□□□□□ -1.63
LINC02408-202ENST00000538573 ZNF681Q96N22 645 aa4.85□□□□□ -1.63
LINC02408-202ENST00000538573 LRFN5Q96NI6 719 aa4.85□□□□□ -1.63
LINC02408-202ENST00000538573 ANKRD27Q96NW4 1050 aa4.85□□□□□ -1.63
LINC02408-202ENST00000538573 DGAT2Q96PD7 388 aa4.85□□□□□ -1.63
LINC02408-202ENST00000538573 RAB3IPQ96QF0 476 aaPredicted RBP4.85□□□□□ -1.63
LINC02408-202ENST00000538573 SH3GL1Q99961 368 aa4.85□□□□□ -1.63
LINC02408-202ENST00000538573 ECSITQ9BQ95 431 aa4.85□□□□□ -1.63
LINC02408-202ENST00000538573 DPH2Q9BQC3 489 aaPredicted RBP4.85□□□□□ -1.63
LINC02408-202ENST00000538573 GPATCH1Q9BRR8 931 aaKnown RBP4.85□□□□□ -1.63
LINC02408-202ENST00000538573 SLC35A5Q9BS91 424 aa4.85□□□□□ -1.63
LINC02408-202ENST00000538573 CHST8Q9H2A9 424 aa4.85□□□□□ -1.63
LINC02408-202ENST00000538573 SOX17Q9H6I2 414 aaPredicted RBP4.85□□□□□ -1.63
LINC02408-202ENST00000538573 CXorf36Q9H7Y0 433 aa4.85□□□□□ -1.63
LINC02408-202ENST00000538573 ANKRA2Q9H9E1 313 aa4.85□□□□□ -1.63
LINC02408-202ENST00000538573 POLR1BQ9H9Y6 1135 aa4.85□□□□□ -1.63
LINC02408-202ENST00000538573 TPT1P8Q9HAU6 139 aa4.85□□□□□ -1.63
LINC02408-202ENST00000538573 C3orf14Q9HBI5 128 aa4.85□□□□□ -1.63
LINC02408-202ENST00000538573 SPAG4Q9NPE6 437 aa4.85□□□□□ -1.63
LINC02408-202ENST00000538573 SLAMF7Q9NQ25 335 aa4.85□□□□□ -1.63
LINC02408-202ENST00000538573 NECTIN3Q9NQS3 549 aa4.85□□□□□ -1.63
LINC02408-202ENST00000538573 PNO1Q9NRX1 252 aaKnown RBP4.85□□□□□ -1.63
LINC02408-202ENST00000538573 SEMA3GQ9NS98 782 aa4.85□□□□□ -1.63
LINC02408-202ENST00000538573 C14orf105Q9NVL8 296 aa4.85□□□□□ -1.63
LINC02408-202ENST00000538573 CMTM6Q9NX76 183 aa4.85□□□□□ -1.63
LINC02408-202ENST00000538573 DLL3Q9NYJ7 618 aa4.85□□□□□ -1.63
LINC02408-202ENST00000538573 FOXJ2Q9P0K8 574 aa4.85□□□□□ -1.63
LINC02408-202ENST00000538573 PACSIN3Q9UKS6 424 aa4.85□□□□□ -1.63
LINC02408-202ENST00000538573 PADI1Q9ULC6 663 aa4.85□□□□□ -1.63
LINC02408-202ENST00000538573 PRPF19Q9UMS4 504 aaKnown RBP4.85□□□□□ -1.63
LINC02408-202ENST00000538573 ERVK-11Q9UQG0 969 aa4.85□□□□□ -1.63
LINC02408-202ENST00000538573 MMACHCQ9Y4U1 282 aa4.85□□□□□ -1.63
LINC02408-202ENST00000538573 SEC23IPQ9Y6Y8 1000 aaKnown RBP4.85□□□□□ -1.63
LINC02408-202ENST00000538573 NUP210LQ5VU65 1888 aa4.85□□□□□ -1.63
LINC02408-202ENST00000538573 ZFHX2Q9C0A1 2572 aaPredicted RBP4.85□□□□□ -1.63
LINC02408-202ENST00000538573 IGLV3-12A0A075B6K2 115 aa4.84□□□□□ -1.63
LINC02408-202ENST00000538573 TRBV5-3A0A0A0MS03 114 aa4.84□□□□□ -1.63
LINC02408-202ENST00000538573 RNF103-CHMP3A0A140T963 221 aa4.84□□□□□ -1.63
LINC02408-202ENST00000538573 CFAP73A6NFT4 308 aa4.84□□□□□ -1.63
LINC02408-202ENST00000538573 C17orf105B2RV13 164 aa4.84□□□□□ -1.63
LINC02408-202ENST00000538573 NME4O00746 187 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms