RNA–Protein interactions for RNA: ENST00000538502.5

SORT1-209, Transcript of sortilin 1, humanhuman

TSL 2 BASIC

Gene SORT1, Length 6,993 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-209ENST00000538502 EDDM13A0A1B0GTR0 161 aa6.6□□□□□ -1.35
SORT1-209ENST00000538502 AGAP14A8MT82 685 aa6.6□□□□□ -1.35
SORT1-209ENST00000538502 BLOC1S5-TXNDC5H3BN57 136 aa6.6□□□□□ -1.35
SORT1-209ENST00000538502 CASC3O15234 703 aaKnown RBP6.6□□□□□ -1.35
SORT1-209ENST00000538502 AKR1C4P17516 323 aa6.6□□□□□ -1.35
SORT1-209ENST00000538502 SLC2A5P22732 501 aa6.6□□□□□ -1.35
SORT1-209ENST00000538502 BDKRB2P30411 391 aa6.6□□□□□ -1.35
SORT1-209ENST00000538502 KCNC1P48547 511 aa6.6□□□□□ -1.35
SORT1-209ENST00000538502 PTH2RP49190 550 aa6.6□□□□□ -1.35
SORT1-209ENST00000538502 FLYWCH1Q4VC44 716 aa6.6□□□□□ -1.35
SORT1-209ENST00000538502 SLC6A19Q695T7 634 aa6.6□□□□□ -1.35
SORT1-209ENST00000538502 SFRP4Q6FHJ7 346 aaPredicted RBP6.6□□□□□ -1.35
SORT1-209ENST00000538502 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.6□□□□□ -1.35
SORT1-209ENST00000538502 DCAF4L2Q8NA75 395 aa6.6□□□□□ -1.35
SORT1-209ENST00000538502 PLA2G15Q8NCC3 412 aa6.6□□□□□ -1.35
SORT1-209ENST00000538502 OR5H6Q8NGV6 325 aa6.6□□□□□ -1.35
SORT1-209ENST00000538502 TMIGD2Q96BF3 282 aa6.6□□□□□ -1.35
SORT1-209ENST00000538502 FEVQ99581 238 aa6.6□□□□□ -1.35
SORT1-209ENST00000538502 HOXD1Q9GZZ0 328 aa6.6□□□□□ -1.35
SORT1-209ENST00000538502 FBRSL1Q9HCM7 1045 aaKnown RBP6.6□□□□□ -1.35
SORT1-209ENST00000538502 UBE2J1Q9Y385 318 aaPredicted RBP6.6□□□□□ -1.35
SORT1-209ENST00000538502 UGT2A1Q9Y4X1 527 aa6.6□□□□□ -1.35
SORT1-209ENST00000538502 OR6C65A6NJZ3 312 aa6.6□□□□□ -1.35
SORT1-209ENST00000538502 EPHX1P07099 455 aa6.6□□□□□ -1.35
SORT1-209ENST00000538502 PPP1R8Q12972 351 aaKnown RBP6.6□□□□□ -1.35
SORT1-209ENST00000538502 APOFQ13790 326 aa6.6□□□□□ -1.35
SORT1-209ENST00000538502 GBX1Q14549 363 aa6.6□□□□□ -1.35
SORT1-209ENST00000538502 FBXL22Q6P050 247 aa6.6□□□□□ -1.35
SORT1-209ENST00000538502 SLC39A4Q6P5W5 647 aa6.6□□□□□ -1.35
SORT1-209ENST00000538502 CXCL17Q6UXB2 119 aa6.6□□□□□ -1.35
SORT1-209ENST00000538502 IFNL1Q8IU54 200 aa6.6□□□□□ -1.35
SORT1-209ENST00000538502 SIAH1Q8IUQ4 282 aa6.6□□□□□ -1.35
SORT1-209ENST00000538502 FAM83FQ8NEG4 500 aaPredicted RBP6.6□□□□□ -1.35
SORT1-209ENST00000538502 OR2T11Q8NH01 316 aa6.6□□□□□ -1.35
SORT1-209ENST00000538502 SLC2A13Q96QE2 648 aa6.6□□□□□ -1.35
SORT1-209ENST00000538502 SLC38A3Q99624 504 aa6.6□□□□□ -1.35
SORT1-209ENST00000538502 MYOCQ99972 504 aa6.6□□□□□ -1.35
SORT1-209ENST00000538502 NSUN3Q9H649 340 aaKnown RBP6.6□□□□□ -1.35
SORT1-209ENST00000538502 SOX17Q9H6I2 414 aaPredicted RBP6.6□□□□□ -1.35
SORT1-209ENST00000538502 MAFFQ9ULX9 164 aa6.6□□□□□ -1.35
SORT1-209ENST00000538502 FOXD2O60548 495 aaPredicted RBP6.6□□□□□ -1.35
SORT1-209ENST00000538502 S1PR4O95977 384 aa6.6□□□□□ -1.35
SORT1-209ENST00000538502 MRPL3P09001 348 aaKnown RBP6.6□□□□□ -1.35
SORT1-209ENST00000538502 OR12D1P0DN82 309 aa6.6□□□□□ -1.35
SORT1-209ENST00000538502 RAB3AP20336 220 aa6.6□□□□□ -1.35
SORT1-209ENST00000538502 CD9P21926 228 aa6.6□□□□□ -1.35
SORT1-209ENST00000538502 PRPS1P60891 318 aa6.6□□□□□ -1.35
SORT1-209ENST00000538502 SIX1Q15475 284 aaPredicted RBP6.6□□□□□ -1.35
SORT1-209ENST00000538502 FAM214AQ32MH5 1076 aa6.6□□□□□ -1.35
SORT1-209ENST00000538502 CACUL1Q86Y37 369 aa6.6□□□□□ -1.35
SORT1-209ENST00000538502 IFNLR1Q8IU57 520 aaPredicted RBP6.6□□□□□ -1.35
SORT1-209ENST00000538502 MRPL41Q8IXM3 137 aaKnown RBP6.6□□□□□ -1.35
SORT1-209ENST00000538502 ANKK1Q8NFD2 765 aa6.6□□□□□ -1.35
SORT1-209ENST00000538502 NUP43Q8NFH3 380 aa6.6□□□□□ -1.35
SORT1-209ENST00000538502 DBF4BQ8NFT6 615 aa6.6□□□□□ -1.35
SORT1-209ENST00000538502 OR14C36Q8NHC7 312 aa6.6□□□□□ -1.35
SORT1-209ENST00000538502 PEBP4Q96S96 227 aa6.6□□□□□ -1.35
SORT1-209ENST00000538502 PINK1Q9BXM7 581 aa6.6□□□□□ -1.35
SORT1-209ENST00000538502 C19orf25Q9UFG5 118 aaPredicted RBP6.6□□□□□ -1.35
SORT1-209ENST00000538502 KLK4Q9Y5K2 254 aa6.6□□□□□ -1.35
SORT1-209ENST00000538502 PSAT1Q9Y617 370 aa6.6□□□□□ -1.35
SORT1-209ENST00000538502 FMN2Q9NZ56 1722 aa6.6□□□□□ -1.35
SORT1-209ENST00000538502 G3V2L1 256 aa6.6□□□□□ -1.35
SORT1-209ENST00000538502 AIPO00170 330 aa6.6□□□□□ -1.35
SORT1-209ENST00000538502 TOR1AO14656 332 aa6.6□□□□□ -1.35
SORT1-209ENST00000538502 SCAF4O95104 1147 aaKnown RBP6.6□□□□□ -1.35
SORT1-209ENST00000538502 TNFP01375 233 aa6.6□□□□□ -1.35
SORT1-209ENST00000538502 TAS2R19P59542 299 aa6.6□□□□□ -1.35
SORT1-209ENST00000538502 MCCD1P59942 119 aaPredicted RBP6.6□□□□□ -1.35
SORT1-209ENST00000538502 SCAPQ12770 1279 aa6.6□□□□□ -1.35
SORT1-209ENST00000538502 RAB31Q13636 194 aa6.6□□□□□ -1.35
SORT1-209ENST00000538502 LAPTM4AQ15012 233 aa6.6□□□□□ -1.35
SORT1-209ENST00000538502 CES4AQ5XG92 561 aa6.6□□□□□ -1.35
SORT1-209ENST00000538502 SPRED1Q7Z699 444 aa6.6□□□□□ -1.35
SORT1-209ENST00000538502 GPR149Q86SP6 731 aa6.6□□□□□ -1.35
SORT1-209ENST00000538502 SLC35F2Q8IXU6 374 aa6.6□□□□□ -1.35
SORT1-209ENST00000538502 ADGRG5Q8IZF4 528 aa6.6□□□□□ -1.35
SORT1-209ENST00000538502 TRAM1L1Q8N609 369 aa6.6□□□□□ -1.35
SORT1-209ENST00000538502 CLDN22Q8N7P3 220 aa6.6□□□□□ -1.35
SORT1-209ENST00000538502 OR52P1PQ8NH57 321 aa6.6□□□□□ -1.35
SORT1-209ENST00000538502 SEC61A2Q9H9S3 476 aa6.6□□□□□ -1.35
SORT1-209ENST00000538502 WASH6PQ9NQA3 447 aa6.6□□□□□ -1.35
SORT1-209ENST00000538502 NANSQ9NR45 359 aa6.6□□□□□ -1.35
SORT1-209ENST00000538502 PNO1Q9NRX1 252 aaKnown RBP6.6□□□□□ -1.35
SORT1-209ENST00000538502 ZNF701Q9NV72 531 aaPredicted RBP6.6□□□□□ -1.35
SORT1-209ENST00000538502 RIPK3Q9Y572 518 aa6.6□□□□□ -1.35
SORT1-209ENST00000538502 PARP4Q9UKK3 1724 aaKnown RBP6.6□□□□□ -1.35
SORT1-209ENST00000538502 ZNF850A8MQ14 1090 aa6.6□□□□□ -1.35
SORT1-209ENST00000538502 STMND1H3BQB6 276 aa6.6□□□□□ -1.35
SORT1-209ENST00000538502 RNASET2O00584 256 aaKnown RBP6.6□□□□□ -1.35
SORT1-209ENST00000538502 ADAM12O43184 909 aa6.6□□□□□ -1.35
SORT1-209ENST00000538502 GSRP00390 522 aa6.6□□□□□ -1.35
SORT1-209ENST00000538502 PRKCAP17252 672 aa6.6□□□□□ -1.35
SORT1-209ENST00000538502 PTPN6P29350 595 aa6.6□□□□□ -1.35
SORT1-209ENST00000538502 PYCR1P32322 319 aa6.6□□□□□ -1.35
SORT1-209ENST00000538502 SHMT2P34897 504 aa6.6□□□□□ -1.35
SORT1-209ENST00000538502 CNR2P34972 360 aa6.6□□□□□ -1.35
SORT1-209ENST00000538502 KCNQ1P51787 676 aa6.6□□□□□ -1.35
SORT1-209ENST00000538502 ARHGAP1Q07960 439 aa6.6□□□□□ -1.35
SORT1-209ENST00000538502 ZNF704Q6ZNC4 412 aaPredicted RBP6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms