RNA–Protein interactions for RNA: ENST00000538253.5

PTPN22-211, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 1 (best) BASIC

Gene PTPN22, Length 3,575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-211ENST00000538253 BOKQ9UMX3 212 aaPredicted RBP3.36□□□□□ -1.87
PTPN22-211ENST00000538253 DAPP1Q9UN19 280 aa3.36□□□□□ -1.87
PTPN22-211ENST00000538253 LIPT1Q9Y234 373 aa3.36□□□□□ -1.87
PTPN22-211ENST00000538253 NAALAD2Q9Y3Q0 740 aa3.36□□□□□ -1.87
PTPN22-211ENST00000538253 SEC23IPQ9Y6Y8 1000 aaKnown RBP3.36□□□□□ -1.87
PTPN22-211ENST00000538253 ZNF106Q9H2Y7 1883 aaKnown RBP3.36□□□□□ -1.87
PTPN22-211ENST00000538253 OTOGLQ3ZCN5 2332 aa3.36□□□□□ -1.87
PTPN22-211ENST00000538253 ABCA7Q8IZY2 2146 aa3.36□□□□□ -1.87
PTPN22-211ENST00000538253 A0A0U1RQS6 177 aa3.36□□□□□ -1.87
PTPN22-211ENST00000538253 SAGE2PA6NJ88 616 aa3.36□□□□□ -1.87
PTPN22-211ENST00000538253 ACOD1A6NK06 481 aa3.36□□□□□ -1.87
PTPN22-211ENST00000538253 IDSB3KWA1 339 aa3.36□□□□□ -1.87
PTPN22-211ENST00000538253 C9orf172C9J069 976 aa3.36□□□□□ -1.87
PTPN22-211ENST00000538253 E9PBE3 544 aa3.36□□□□□ -1.87
PTPN22-211ENST00000538253 UBDO15205 165 aa3.36□□□□□ -1.87
PTPN22-211ENST00000538253 TAPBPO15533 448 aa3.36□□□□□ -1.87
PTPN22-211ENST00000538253 GPR39O43194 453 aa3.36□□□□□ -1.87
PTPN22-211ENST00000538253 TYROBPO43914 113 aa3.36□□□□□ -1.87
PTPN22-211ENST00000538253 HMGN1P05114 100 aa3.36□□□□□ -1.87
PTPN22-211ENST00000538253 DHRS4L1P0CG22 281 aa3.36□□□□□ -1.87
PTPN22-211ENST00000538253 ZNF888P0CJ79 500 aaPredicted RBP3.36□□□□□ -1.87
PTPN22-211ENST00000538253 SMIM10L1P0DMW3 83 aa3.36□□□□□ -1.87
PTPN22-211ENST00000538253 CCL4P13236 92 aa3.36□□□□□ -1.87
PTPN22-211ENST00000538253 PVRP15151 417 aa3.36□□□□□ -1.87
PTPN22-211ENST00000538253 TSPAN8P19075 237 aa3.36□□□□□ -1.87
PTPN22-211ENST00000538253 DDCP20711 480 aa3.36□□□□□ -1.87
PTPN22-211ENST00000538253 GABRA4P48169 554 aa3.36□□□□□ -1.87
PTPN22-211ENST00000538253 RNF144AP50876 292 aaPredicted RBP3.36□□□□□ -1.87
PTPN22-211ENST00000538253 C2orf80Q0P641 193 aa3.36□□□□□ -1.87
PTPN22-211ENST00000538253 CLN3Q13286 438 aa3.36□□□□□ -1.87
PTPN22-211ENST00000538253 SLAMF1Q13291 335 aa3.36□□□□□ -1.87
PTPN22-211ENST00000538253 DCTN2Q13561 401 aaKnown RBP3.36□□□□□ -1.87
PTPN22-211ENST00000538253 TLR1Q15399 786 aa3.36□□□□□ -1.87
PTPN22-211ENST00000538253 KCNJ8Q15842 424 aa3.36□□□□□ -1.87
PTPN22-211ENST00000538253 DECR1Q16698 335 aa3.36□□□□□ -1.87
PTPN22-211ENST00000538253 DEFB134Q4QY38 66 aa3.36□□□□□ -1.87
PTPN22-211ENST00000538253 COQ5Q5HYK3 327 aa3.36□□□□□ -1.87
PTPN22-211ENST00000538253 FAM205BPQ63HN1 556 aa3.36□□□□□ -1.87
PTPN22-211ENST00000538253 SLC6A19Q695T7 634 aa3.36□□□□□ -1.87
PTPN22-211ENST00000538253 RAB12Q6IQ22 244 aa3.36□□□□□ -1.87
PTPN22-211ENST00000538253 RPUSD3Q6P087 351 aaKnown RBP3.36□□□□□ -1.87
PTPN22-211ENST00000538253 MRPL14Q6P1L8 145 aaKnown RBP3.36□□□□□ -1.87
PTPN22-211ENST00000538253 ZNF574Q6ZN55 896 aaPredicted RBP3.36□□□□□ -1.87
PTPN22-211ENST00000538253 IDO2Q6ZQW0 420 aa3.36□□□□□ -1.87
PTPN22-211ENST00000538253 MRGPREQ86SM8 312 aa3.36□□□□□ -1.87
PTPN22-211ENST00000538253 PM20D2Q8IYS1 436 aa3.36□□□□□ -1.87
PTPN22-211ENST00000538253 DEPDC4Q8N2C3 294 aa3.36□□□□□ -1.87
PTPN22-211ENST00000538253 LILRA3Q8N6C8 439 aaPredicted RBP3.36□□□□□ -1.87
PTPN22-211ENST00000538253 ZNF321PQ8N8H1 164 aa3.36□□□□□ -1.87
PTPN22-211ENST00000538253 FNDC5Q8NAU1 212 aa3.36□□□□□ -1.87
PTPN22-211ENST00000538253 CKAP2Q8WWK9 683 aa3.36□□□□□ -1.87
PTPN22-211ENST00000538253 RNF166Q96A37 237 aaPredicted RBP3.36□□□□□ -1.87
PTPN22-211ENST00000538253 KLHL29Q96CT2 875 aa3.36□□□□□ -1.87
PTPN22-211ENST00000538253 C19orf60Q96EN9 201 aa3.36□□□□□ -1.87
PTPN22-211ENST00000538253 SMIM10Q96HG1 83 aa3.36□□□□□ -1.87
PTPN22-211ENST00000538253 ITCHQ96J02 903 aa3.36□□□□□ -1.87
PTPN22-211ENST00000538253 LRGUKQ96M69 825 aa3.36□□□□□ -1.87
PTPN22-211ENST00000538253 WDR83Q9BRX9 315 aaKnown RBP3.36□□□□□ -1.87
PTPN22-211ENST00000538253 BCL2L14Q9BZR8 327 aa3.36□□□□□ -1.87
PTPN22-211ENST00000538253 SPRTNQ9H040 489 aaPredicted RBP3.36□□□□□ -1.87
PTPN22-211ENST00000538253 CCDC134Q9H6E4 229 aa3.36□□□□□ -1.87
PTPN22-211ENST00000538253 FGFR1OP2Q9NVK5 253 aa3.36□□□□□ -1.87
PTPN22-211ENST00000538253 KLHL28Q9NXS3 571 aa3.36□□□□□ -1.87
PTPN22-211ENST00000538253 TINAGQ9UJW2 476 aa3.36□□□□□ -1.87
PTPN22-211ENST00000538253 VPS4AQ9UN37 437 aa3.36□□□□□ -1.87
PTPN22-211ENST00000538253 SLCO1B1Q9Y6L6 691 aa3.36□□□□□ -1.87
PTPN22-211ENST00000538253 ANKRD36A6QL64 1941 aa3.35□□□□□ -1.87
PTPN22-211ENST00000538253 A0A0A6YYC8 382 aaPredicted RBP3.35□□□□□ -1.87
PTPN22-211ENST00000538253 FUOMA2VDF0 154 aa3.35□□□□□ -1.87
PTPN22-211ENST00000538253 PRORSD1PA6NEY8 169 aa3.35□□□□□ -1.87
PTPN22-211ENST00000538253 I3L1I5 382 aaPredicted RBP3.35□□□□□ -1.87
PTPN22-211ENST00000538253 PSMD9O00233 223 aa3.35□□□□□ -1.87
PTPN22-211ENST00000538253 FANCGO15287 622 aa3.35□□□□□ -1.87
PTPN22-211ENST00000538253 EMC8O43402 210 aa3.35□□□□□ -1.87
PTPN22-211ENST00000538253 CNOT3O75175 753 aaKnown RBP3.35□□□□□ -1.87
PTPN22-211ENST00000538253 GOSR1O95249 250 aa3.35□□□□□ -1.87
PTPN22-211ENST00000538253 CLPTM1O96005 669 aa3.35□□□□□ -1.87
PTPN22-211ENST00000538253 P04436 131 aa3.35□□□□□ -1.87
PTPN22-211ENST00000538253 ACAA1P09110 424 aaPredicted RBP3.35□□□□□ -1.87
PTPN22-211ENST00000538253 MTHFD2P13995 350 aa3.35□□□□□ -1.87
PTPN22-211ENST00000538253 ITGA2P17301 1181 aa3.35□□□□□ -1.87
PTPN22-211ENST00000538253 NT5EP21589 574 aa3.35□□□□□ -1.87
PTPN22-211ENST00000538253 KIR3DL1P43629 444 aa3.35□□□□□ -1.87
PTPN22-211ENST00000538253 KHKP50053 298 aa3.35□□□□□ -1.87
PTPN22-211ENST00000538253 SSR4P51571 173 aa3.35□□□□□ -1.87
PTPN22-211ENST00000538253 PLA2G16P53816 162 aa3.35□□□□□ -1.87
PTPN22-211ENST00000538253 CYP4F2P78329 520 aa3.35□□□□□ -1.87
PTPN22-211ENST00000538253 SGO1Q5FBB7 561 aa3.35□□□□□ -1.87
PTPN22-211ENST00000538253 TNFAIP8L3Q5GJ75 292 aa3.35□□□□□ -1.87
PTPN22-211ENST00000538253 PRAMEF8Q5VWM4 474 aa3.35□□□□□ -1.87
PTPN22-211ENST00000538253 PRAMEF7Q5VXH5 474 aa3.35□□□□□ -1.87
PTPN22-211ENST00000538253 ERICH5Q6P6B1 374 aa3.35□□□□□ -1.87
PTPN22-211ENST00000538253 PAPD4Q6PIY7 484 aaKnown RBP3.35□□□□□ -1.87
PTPN22-211ENST00000538253 FAM198BQ6UWH4 519 aa3.35□□□□□ -1.87
PTPN22-211ENST00000538253 ZNF517Q6ZMY9 492 aaPredicted RBP3.35□□□□□ -1.87
PTPN22-211ENST00000538253 RTL4Q6ZR62 310 aa3.35□□□□□ -1.87
PTPN22-211ENST00000538253 KRT74Q7RTS7 529 aa3.35□□□□□ -1.87
PTPN22-211ENST00000538253 B3GNT8Q7Z7M8 397 aa3.35□□□□□ -1.87
PTPN22-211ENST00000538253 KRT73Q86Y46 540 aa3.35□□□□□ -1.87
PTPN22-211ENST00000538253 C10orf107Q8IVU9 208 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms